RNA–Protein interactions for RNA: ENST00000600022.5

IRF3-225, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-225ENST00000600022 JCHAINP01591 159 aa13.45□□□□□ -0.26
IRF3-225ENST00000600022 PDGFAP04085 211 aa13.45□□□□□ -0.26
IRF3-225ENST00000600022 TCN2P20062 427 aa13.45□□□□□ -0.26
IRF3-225ENST00000600022 CD86P42081 329 aa13.45□□□□□ -0.26
IRF3-225ENST00000600022 CDK16Q00536 496 aa13.45□□□□□ -0.26
IRF3-225ENST00000600022 ERV3-1Q14264 604 aa13.45□□□□□ -0.26
IRF3-225ENST00000600022 GALNT3Q14435 633 aa13.45□□□□□ -0.26
IRF3-225ENST00000600022 KCNJ11Q14654 390 aa13.45□□□□□ -0.26
IRF3-225ENST00000600022 KHDC1Q4VXA5 237 aaKnown RBP13.45□□□□□ -0.26
IRF3-225ENST00000600022 DNAJC21Q5F1R6 531 aaKnown RBP13.45□□□□□ -0.26
IRF3-225ENST00000600022 CRTC3Q6UUV7 619 aa13.45□□□□□ -0.26
IRF3-225ENST00000600022 ADGRG6Q86SQ4 1221 aa13.45□□□□□ -0.26
IRF3-225ENST00000600022 SLC9B2Q86UD5 537 aa13.45□□□□□ -0.26
IRF3-225ENST00000600022 KLHDC8BQ8IXV7 354 aa13.45□□□□□ -0.26
IRF3-225ENST00000600022 NDUFAF2Q8N183 169 aa13.45□□□□□ -0.26
IRF3-225ENST00000600022 KIAA1143Q96AT1 154 aaPredicted RBP13.45□□□□□ -0.26
IRF3-225ENST00000600022 C9orf72Q96LT7 481 aa13.45□□□□□ -0.26
IRF3-225ENST00000600022 TGM7Q96PF1 710 aa13.45□□□□□ -0.26
IRF3-225ENST00000600022 LYSMD1Q96S90 227 aa13.45□□□□□ -0.26
IRF3-225ENST00000600022 EIF2B3Q9NR50 452 aaKnown RBP13.45□□□□□ -0.26
IRF3-225ENST00000600022 ANAPC2Q9UJX6 822 aa13.45□□□□□ -0.26
IRF3-225ENST00000600022 CROTQ9UKG9 612 aa13.45□□□□□ -0.26
IRF3-225ENST00000600022 TMPRSS11EQ9UL52 423 aa13.45□□□□□ -0.26
IRF3-225ENST00000600022 DNAJC16Q9Y2G8 782 aa13.45□□□□□ -0.26
IRF3-225ENST00000600022 PSMD3O43242 534 aa13.44□□□□□ -0.26
IRF3-225ENST00000600022 TMEM63AO94886 807 aa13.44□□□□□ -0.26
IRF3-225ENST00000600022 TIAF1O95411 115 aa13.44□□□□□ -0.26
IRF3-225ENST00000600022 METTL18O95568 372 aa13.44□□□□□ -0.26
IRF3-225ENST00000600022 C9P02748 559 aa13.44□□□□□ -0.26
IRF3-225ENST00000600022 APRTP07741 180 aa13.44□□□□□ -0.26
IRF3-225ENST00000600022 BRAFP15056 766 aa13.44□□□□□ -0.26
IRF3-225ENST00000600022 TPSB2P20231 275 aa13.44□□□□□ -0.26
IRF3-225ENST00000600022 CD68P34810 354 aaPredicted RBP13.44□□□□□ -0.26
IRF3-225ENST00000600022 DLSTP36957 453 aa13.44□□□□□ -0.26
IRF3-225ENST00000600022 PPP1CAP62136 330 aa13.44□□□□□ -0.26
IRF3-225ENST00000600022 TPSAB1Q15661 275 aa13.44□□□□□ -0.26
IRF3-225ENST00000600022 SEPT7Q16181 437 aaKnown RBP13.44□□□□□ -0.26
IRF3-225ENST00000600022 PARP6Q2NL67 630 aa13.44□□□□□ -0.26
IRF3-225ENST00000600022 PID1Q7Z2X4 250 aa13.44□□□□□ -0.26
IRF3-225ENST00000600022 RELL1Q8IUW5 271 aa13.44□□□□□ -0.26
IRF3-225ENST00000600022 ZNF547Q8IVP9 402 aa13.44□□□□□ -0.26
IRF3-225ENST00000600022 TAB3Q8N5C8 712 aaPredicted RBP13.44□□□□□ -0.26
IRF3-225ENST00000600022 NAT8LQ8N9F0 302 aa13.44□□□□□ -0.26
IRF3-225ENST00000600022 OR6C1Q96RD1 312 aa13.44□□□□□ -0.26
IRF3-225ENST00000600022 GORASP1Q9BQQ3 440 aa13.44□□□□□ -0.26
IRF3-225ENST00000600022 MLPHQ9BV36 600 aaPredicted RBP13.44□□□□□ -0.26
IRF3-225ENST00000600022 ULBP3Q9BZM4 244 aa13.44□□□□□ -0.26
IRF3-225ENST00000600022 OSGEPL1Q9H4B0 414 aa13.44□□□□□ -0.26
IRF3-225ENST00000600022 XAB2Q9HCS7 855 aaKnown RBP13.44□□□□□ -0.26
IRF3-225ENST00000600022 SAYSD1Q9NPB0 183 aa13.44□□□□□ -0.26
IRF3-225ENST00000600022 RSPH14Q9UHP6 348 aa13.44□□□□□ -0.26
IRF3-225ENST00000600022 SPTAN1Q13813 2472 aaKnown RBP13.44□□□□□ -0.26
IRF3-225ENST00000600022 MN1Q10571 1320 aaPredicted RBP13.43□□□□□ -0.26
IRF3-225ENST00000600022 KIR2DS5A0A0G2JLQ3 304 aa13.43□□□□□ -0.26
IRF3-225ENST00000600022 A0A0G2JNG1 304 aa13.43□□□□□ -0.26
IRF3-225ENST00000600022 OR52A4PA6NMU1 304 aa13.43□□□□□ -0.26
IRF3-225ENST00000600022 ERI2A8K979 691 aaKnown RBP13.43□□□□□ -0.26
IRF3-225ENST00000600022 GOLGA8KD6RF30 607 aa13.43□□□□□ -0.26
IRF3-225ENST00000600022 KIR2DS3K7RE56 304 aa13.43□□□□□ -0.26
IRF3-225ENST00000600022 AP3B1O00203 1094 aa13.43□□□□□ -0.26
IRF3-225ENST00000600022 AURKAO14965 403 aa13.43□□□□□ -0.26
IRF3-225ENST00000600022 KATNA1O75449 491 aa13.43□□□□□ -0.26
IRF3-225ENST00000600022 DNAJB5O75953 348 aa13.43□□□□□ -0.26
IRF3-225ENST00000600022 KIAA0754O94854 1291 aa13.43□□□□□ -0.26
IRF3-225ENST00000600022 UBXN7O94888 489 aa13.43□□□□□ -0.26
IRF3-225ENST00000600022 PYGLP06737 847 aa13.43□□□□□ -0.26
IRF3-225ENST00000600022 MYZAPP0CAP1 466 aa13.43□□□□□ -0.26
IRF3-225ENST00000600022 XRCC1P18887 633 aaPredicted RBP13.43□□□□□ -0.26
IRF3-225ENST00000600022 NFKB1P19838 968 aa13.43□□□□□ -0.26
IRF3-225ENST00000600022 RPL10P27635 214 aaKnown RBP13.43□□□□□ -0.26
IRF3-225ENST00000600022 PSMB4P28070 264 aa13.43□□□□□ -0.26
IRF3-225ENST00000600022 CA5AP35218 305 aa13.43□□□□□ -0.26
IRF3-225ENST00000600022 PHBP35232 272 aa13.43□□□□□ -0.26
IRF3-225ENST00000600022 MAGEA4P43358 317 aa13.43□□□□□ -0.26
IRF3-225ENST00000600022 EPHA4P54764 986 aa13.43□□□□□ -0.26
IRF3-225ENST00000600022 KIR2DS5Q14953 304 aa13.43□□□□□ -0.26
IRF3-225ENST00000600022 LACTB2Q53H82 288 aaPredicted RBP13.43□□□□□ -0.26
IRF3-225ENST00000600022 ANKRD22Q5VYY1 191 aa13.43□□□□□ -0.26
IRF3-225ENST00000600022 C6orf15Q6UXA7 325 aaPredicted RBP13.43□□□□□ -0.26
IRF3-225ENST00000600022 CERS6Q6ZMG9 384 aa13.43□□□□□ -0.26
IRF3-225ENST00000600022 TMEM26Q6ZUK4 368 aa13.43□□□□□ -0.26
IRF3-225ENST00000600022 MCUQ8NE86 351 aa13.43□□□□□ -0.26
IRF3-225ENST00000600022 RSC1A1Q92681 617 aa13.43□□□□□ -0.26
IRF3-225ENST00000600022 MIB2Q96AX9 1013 aa13.43□□□□□ -0.26
IRF3-225ENST00000600022 SH3KBP1Q96B97 665 aa13.43□□□□□ -0.26
IRF3-225ENST00000600022 AGAP3Q96P47 875 aa13.43□□□□□ -0.26
IRF3-225ENST00000600022 ZIM3Q96PE6 472 aa13.43□□□□□ -0.26
IRF3-225ENST00000600022 PSMG3-AS1Q96PY0 264 aa13.43□□□□□ -0.26
IRF3-225ENST00000600022 ZPBPQ9BS86 351 aa13.43□□□□□ -0.26
IRF3-225ENST00000600022 SPATA16Q9BXB7 569 aa13.43□□□□□ -0.26
IRF3-225ENST00000600022 TXLNGYQ9BZA5 131 aa13.43□□□□□ -0.26
IRF3-225ENST00000600022 STMN4Q9H169 189 aaPredicted RBP13.43□□□□□ -0.26
IRF3-225ENST00000600022 ETNK1Q9HBU6 452 aa13.43□□□□□ -0.26
IRF3-225ENST00000600022 TRIM39Q9HCM9 518 aa13.43□□□□□ -0.26
IRF3-225ENST00000600022 GOLGA8MH3BSY2 632 aa13.42□□□□□ -0.26
IRF3-225ENST00000600022 RIPK2O43353 540 aa13.42□□□□□ -0.26
IRF3-225ENST00000600022 SLC25A14O95258 325 aaPredicted RBP13.42□□□□□ -0.26
IRF3-225ENST00000600022 SLC4A1P02730 911 aa13.42□□□□□ -0.26
IRF3-225ENST00000600022 NUDT17P0C025 328 aa13.42□□□□□ -0.26
IRF3-225ENST00000600022 GP1BBP13224 206 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms