RNA–Protein interactions for RNA: ENST00000598471.1

UPF1-206, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-206ENST00000598471 DNASE2BQ8WZ79 361 aa15.14■□□□□ 0.01
UPF1-206ENST00000598471 OR1E3Q8WZA6 343 aa15.14■□□□□ 0.01
UPF1-206ENST00000598471 EXT2Q93063 718 aa15.14■□□□□ 0.01
UPF1-206ENST00000598471 ATOH8Q96SQ7 321 aa15.14■□□□□ 0.01
UPF1-206ENST00000598471 DPEP2Q9H4A9 486 aa15.14■□□□□ 0.01
UPF1-206ENST00000598471 GPR27Q9NS67 375 aa15.14■□□□□ 0.01
UPF1-206ENST00000598471 ACSL5Q9ULC5 683 aa15.14■□□□□ 0.01
UPF1-206ENST00000598471 CDYLQ9Y232 598 aa15.14■□□□□ 0.01
UPF1-206ENST00000598471 ZDBF2Q9HCK1 2354 aa15.13■□□□□ 0.01
UPF1-206ENST00000598471 SPTY2D1-AS1A0A0U1RR47 76 aa15.13■□□□□ 0.01
UPF1-206ENST00000598471 TARM1B6A8C7 271 aa15.13■□□□□ 0.01
UPF1-206ENST00000598471 G3V2L1 256 aa15.13■□□□□ 0.01
UPF1-206ENST00000598471 SNX2O60749 519 aa15.13■□□□□ 0.01
UPF1-206ENST00000598471 RASGRP1O95267 797 aa15.13■□□□□ 0.01
UPF1-206ENST00000598471 TNFP01375 233 aa15.13■□□□□ 0.01
UPF1-206ENST00000598471 GFAPP14136 432 aa15.13■□□□□ 0.01
UPF1-206ENST00000598471 ALDH3A1P30838 453 aa15.13■□□□□ 0.01
UPF1-206ENST00000598471 PREPP48147 710 aa15.13■□□□□ 0.01
UPF1-206ENST00000598471 BLKP51451 505 aa15.13■□□□□ 0.01
UPF1-206ENST00000598471 NFE2L1Q14494 772 aa15.13■□□□□ 0.01
UPF1-206ENST00000598471 ZNF528Q3MIS6 628 aa15.13■□□□□ 0.01
UPF1-206ENST00000598471 ZNF658BQ4V348 819 aaPredicted RBP15.13■□□□□ 0.01
UPF1-206ENST00000598471 LIPMQ5VYY2 423 aa15.13■□□□□ 0.01
UPF1-206ENST00000598471 LYSMD4Q5XG99 296 aa15.13■□□□□ 0.01
UPF1-206ENST00000598471 ATG16L1Q676U5 607 aa15.13■□□□□ 0.01
UPF1-206ENST00000598471 PMS2CLQ68D20 193 aa15.13■□□□□ 0.01
UPF1-206ENST00000598471 TTC19Q6DKK2 380 aaPredicted RBP15.13■□□□□ 0.01
UPF1-206ENST00000598471 CYHR1Q6ZMK1 362 aa15.13■□□□□ 0.01
UPF1-206ENST00000598471 UBE2R2Q712K3 238 aaPredicted RBP15.13■□□□□ 0.01
UPF1-206ENST00000598471 ARMCX6Q7L4S7 300 aa15.13■□□□□ 0.01
UPF1-206ENST00000598471 RD3Q7Z3Z2 195 aa15.13■□□□□ 0.01
UPF1-206ENST00000598471 PARGQ86W56 976 aa15.13■□□□□ 0.01
UPF1-206ENST00000598471 VRK3Q8IV63 474 aa15.13■□□□□ 0.01
UPF1-206ENST00000598471 SPNS2Q8IVW8 549 aa15.13■□□□□ 0.01
UPF1-206ENST00000598471 PDXPQ96GD0 296 aa15.13■□□□□ 0.01
UPF1-206ENST00000598471 MECRQ9BV79 373 aa15.13■□□□□ 0.01
UPF1-206ENST00000598471 CCDC134Q9H6E4 229 aa15.13■□□□□ 0.01
UPF1-206ENST00000598471 TM9SF3Q9HD45 589 aa15.13■□□□□ 0.01
UPF1-206ENST00000598471 MRPL40Q9NQ50 206 aaKnown RBP15.13■□□□□ 0.01
UPF1-206ENST00000598471 KLC4Q9NSK0 619 aa15.13■□□□□ 0.01
UPF1-206ENST00000598471 NUDT4Q9NZJ9 180 aa15.13■□□□□ 0.01
UPF1-206ENST00000598471 DNAJC16Q9Y2G8 782 aa15.13■□□□□ 0.01
UPF1-206ENST00000598471 OARD1Q9Y530 152 aa15.13■□□□□ 0.01
UPF1-206ENST00000598471 DGKBQ9Y6T7 804 aa15.13■□□□□ 0.01
UPF1-206ENST00000598471 PIKFYVEQ9Y2I7 2098 aa15.13■□□□□ 0.01
UPF1-206ENST00000598471 A0A1W2PR77 199 aa15.12■□□□□ 0.01
UPF1-206ENST00000598471 IFRD1O00458 451 aaPredicted RBP15.12■□□□□ 0.01
UPF1-206ENST00000598471 TRIM13O60858 407 aa15.12■□□□□ 0.01
UPF1-206ENST00000598471 CATP04040 527 aaKnown RBP15.12■□□□□ 0.01
UPF1-206ENST00000598471 HIST1H2AGP0C0S8 130 aaPredicted RBP15.12■□□□□ 0.01
UPF1-206ENST00000598471 SLC35G4P0C7Q5 338 aa15.12■□□□□ 0.01
UPF1-206ENST00000598471 GNSP15586 552 aa15.12■□□□□ 0.01
UPF1-206ENST00000598471 HIST1H2ADP20671 130 aa15.12■□□□□ 0.01
UPF1-206ENST00000598471 IDSP22304 550 aa15.12■□□□□ 0.01
UPF1-206ENST00000598471 KCNA4P22459 653 aa15.12■□□□□ 0.01
UPF1-206ENST00000598471 MAOBP27338 520 aa15.12■□□□□ 0.01
UPF1-206ENST00000598471 MAP4P27816 1152 aaKnown RBP15.12■□□□□ 0.01
UPF1-206ENST00000598471 DHPSP49366 369 aaPredicted RBP15.12■□□□□ 0.01
UPF1-206ENST00000598471 NFKB2Q00653 900 aa15.12■□□□□ 0.01
UPF1-206ENST00000598471 TCF15Q12870 199 aa15.12■□□□□ 0.01
UPF1-206ENST00000598471 TEAD4Q15561 434 aa15.12■□□□□ 0.01
UPF1-206ENST00000598471 ALG11Q2TAA5 492 aa15.12■□□□□ 0.01
UPF1-206ENST00000598471 TPRG1LQ5T0D9 272 aa15.12■□□□□ 0.01
UPF1-206ENST00000598471 METRNLQ641Q3 311 aa15.12■□□□□ 0.01
UPF1-206ENST00000598471 CEP68Q76N32 757 aa15.12■□□□□ 0.01
UPF1-206ENST00000598471 PDZD3Q86UT5 571 aa15.12■□□□□ 0.01
UPF1-206ENST00000598471 HID1Q8IV36 788 aa15.12■□□□□ 0.01
UPF1-206ENST00000598471 C10orf107Q8IVU9 208 aa15.12■□□□□ 0.01
UPF1-206ENST00000598471 SLC22A18ASQ8N1D0 253 aa15.12■□□□□ 0.01
UPF1-206ENST00000598471 TMEM151AQ8N4L1 468 aa15.12■□□□□ 0.01
UPF1-206ENST00000598471 MCOLN3Q8TDD5 553 aa15.12■□□□□ 0.01
UPF1-206ENST00000598471 ASB11Q8WXH4 323 aa15.12■□□□□ 0.01
UPF1-206ENST00000598471 TSACCQ96A04 125 aaPredicted RBP15.12■□□□□ 0.01
UPF1-206ENST00000598471 HIST1H2AHQ96KK5 128 aa15.12■□□□□ 0.01
UPF1-206ENST00000598471 HIST1H2AJQ99878 128 aa15.12■□□□□ 0.01
UPF1-206ENST00000598471 H2AFJQ9BTM1 129 aa15.12■□□□□ 0.01
UPF1-206ENST00000598471 OSGEPL1Q9H4B0 414 aa15.12■□□□□ 0.01
UPF1-206ENST00000598471 RDH14Q9HBH5 336 aa15.12■□□□□ 0.01
UPF1-206ENST00000598471 OXSMQ9NWU1 459 aa15.12■□□□□ 0.01
UPF1-206ENST00000598471 TRNAU1APQ9NX07 287 aaKnown RBP15.12■□□□□ 0.01
UPF1-206ENST00000598471 ZSCAN32Q9NX65 697 aa15.12■□□□□ 0.01
UPF1-206ENST00000598471 CD274Q9NZQ7 290 aa15.12■□□□□ 0.01
UPF1-206ENST00000598471 SIRPGQ9P1W8 387 aa15.12■□□□□ 0.01
UPF1-206ENST00000598471 GULP1Q9UBP9 304 aa15.12■□□□□ 0.01
UPF1-206ENST00000598471 SLC23A2Q9UGH3 650 aa15.12■□□□□ 0.01
UPF1-206ENST00000598471 SUSD2Q9UGT4 822 aa15.12■□□□□ 0.01
UPF1-206ENST00000598471 IKZF3Q9UKT9 509 aa15.12■□□□□ 0.01
UPF1-206ENST00000598471 PCYT1BQ9Y5K3 369 aaPredicted RBP15.12■□□□□ 0.01
UPF1-206ENST00000598471 DOCK9Q9BZ29 2069 aa15.12■□□□□ 0.01
UPF1-206ENST00000598471 A8MT66 165 aa15.11■□□□□ 0.01
UPF1-206ENST00000598471 PRR5-ARHGAP8B1AHC4 643 aa15.11■□□□□ 0.01
UPF1-206ENST00000598471 UBXN8O00124 270 aa15.11■□□□□ 0.01
UPF1-206ENST00000598471 TLR4O00206 839 aa15.11■□□□□ 0.01
UPF1-206ENST00000598471 BCAT2O15382 392 aaPredicted RBP15.11■□□□□ 0.01
UPF1-206ENST00000598471 DLX3O60479 287 aa15.11■□□□□ 0.01
UPF1-206ENST00000598471 IPO13O94829 963 aaKnown RBP15.11■□□□□ 0.01
UPF1-206ENST00000598471 MATN4O95460 622 aa15.11■□□□□ 0.01
UPF1-206ENST00000598471 FUCA1P04066 466 aa15.11■□□□□ 0.01
UPF1-206ENST00000598471 RPN2P04844 631 aa15.11■□□□□ 0.01
UPF1-206ENST00000598471 SERPINE1P05121 402 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms