RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 SIDT2Q8NBJ9 832 aaKnown RBP14.69□□□□□ -0.06
LIG1-215ENST00000597901 HDAC10Q969S8 669 aa14.69□□□□□ -0.06
LIG1-215ENST00000597901 KIAA1143Q96AT1 154 aaPredicted RBP14.69□□□□□ -0.06
LIG1-215ENST00000597901 CD180Q99467 661 aa14.69□□□□□ -0.06
LIG1-215ENST00000597901 EFHD1Q9BUP0 239 aa14.69□□□□□ -0.06
LIG1-215ENST00000597901 ULBP3Q9BZM4 244 aa14.69□□□□□ -0.06
LIG1-215ENST00000597901 OR52A5Q9H2C5 316 aa14.69□□□□□ -0.06
LIG1-215ENST00000597901 VPS37BQ9H9H4 285 aa14.69□□□□□ -0.06
LIG1-215ENST00000597901 CASS4Q9NQ75 786 aa14.69□□□□□ -0.06
LIG1-215ENST00000597901 PAK5Q9P286 719 aa14.69□□□□□ -0.06
LIG1-215ENST00000597901 IL17BQ9UHF5 180 aa14.69□□□□□ -0.06
LIG1-215ENST00000597901 PRSS21Q9Y6M0 314 aa14.69□□□□□ -0.06
LIG1-215ENST00000597901 HEATR9A2RTY3 570 aa14.68□□□□□ -0.06
LIG1-215ENST00000597901 ZNF891A8MT65 544 aaPredicted RBP14.68□□□□□ -0.06
LIG1-215ENST00000597901 B8ZZF3 427 aa14.68□□□□□ -0.06
LIG1-215ENST00000597901 J3QKU1 62 aa14.68□□□□□ -0.06
LIG1-215ENST00000597901 GSTM1P09488 218 aa14.68□□□□□ -0.06
LIG1-215ENST00000597901 NSG1P42857 185 aa14.68□□□□□ -0.06
LIG1-215ENST00000597901 ARL4DP49703 201 aa14.68□□□□□ -0.06
LIG1-215ENST00000597901 GSTM4Q03013 218 aa14.68□□□□□ -0.06
LIG1-215ENST00000597901 RPA4Q13156 261 aa14.68□□□□□ -0.06
LIG1-215ENST00000597901 ITIH4Q14624 930 aa14.68□□□□□ -0.06
LIG1-215ENST00000597901 KCNAB1Q14722 419 aa14.68□□□□□ -0.06
LIG1-215ENST00000597901 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.68□□□□□ -0.06
LIG1-215ENST00000597901 TSTD2Q5T7W7 516 aa14.68□□□□□ -0.06
LIG1-215ENST00000597901 DRICH1Q6PGQ1 229 aaPredicted RBP14.68□□□□□ -0.06
LIG1-215ENST00000597901 CERS6Q6ZMG9 384 aa14.68□□□□□ -0.06
LIG1-215ENST00000597901 BPHLQ86WA6 291 aaPredicted RBP14.68□□□□□ -0.06
LIG1-215ENST00000597901 OOSP2Q86WS3 158 aa14.68□□□□□ -0.06
LIG1-215ENST00000597901 PPP1R3BQ86XI6 285 aa14.68□□□□□ -0.06
LIG1-215ENST00000597901 KMT5CQ86Y97 462 aa14.68□□□□□ -0.06
LIG1-215ENST00000597901 CCDC89Q8N998 374 aa14.68□□□□□ -0.06
LIG1-215ENST00000597901 GALNT6Q8NCL4 622 aa14.68□□□□□ -0.06
LIG1-215ENST00000597901 ACVR1CQ8NER5 493 aa14.68□□□□□ -0.06
LIG1-215ENST00000597901 OR13J1Q8NGT2 312 aa14.68□□□□□ -0.06
LIG1-215ENST00000597901 RANBP9Q96S59 729 aa14.68□□□□□ -0.06
LIG1-215ENST00000597901 TLR10Q9BXR5 811 aa14.68□□□□□ -0.06
LIG1-215ENST00000597901 PDE7BQ9NP56 450 aa14.68□□□□□ -0.06
LIG1-215ENST00000597901 SLC2A6Q9UGQ3 507 aa14.68□□□□□ -0.06
LIG1-215ENST00000597901 RIMKLBQ9ULI2 386 aa14.68□□□□□ -0.06
LIG1-215ENST00000597901 SMG1Q96Q15 3661 aaKnown RBP14.68□□□□□ -0.06
LIG1-215ENST00000597901 GOLGA6L3A6NEY3 463 aa14.67□□□□□ -0.06
LIG1-215ENST00000597901 IFRD1O00458 451 aaPredicted RBP14.67□□□□□ -0.06
LIG1-215ENST00000597901 KIAA0754O94854 1291 aa14.67□□□□□ -0.06
LIG1-215ENST00000597901 FGGP02679 453 aa14.67□□□□□ -0.06
LIG1-215ENST00000597901 APRTP07741 180 aa14.67□□□□□ -0.06
LIG1-215ENST00000597901 FAM87AP0C7U9 286 aa14.67□□□□□ -0.06
LIG1-215ENST00000597901 SFTPCP11686 197 aa14.67□□□□□ -0.06
LIG1-215ENST00000597901 ITGB6P18564 788 aa14.67□□□□□ -0.06
LIG1-215ENST00000597901 POLR2CP19387 275 aaPredicted RBP14.67□□□□□ -0.06
LIG1-215ENST00000597901 F8A1P23610 371 aa14.67□□□□□ -0.06
LIG1-215ENST00000597901 FOXN2P32314 431 aa14.67□□□□□ -0.06
LIG1-215ENST00000597901 STAT5AP42229 794 aa14.67□□□□□ -0.06
LIG1-215ENST00000597901 PREPP48147 710 aa14.67□□□□□ -0.06
LIG1-215ENST00000597901 ARCN1P48444 511 aaKnown RBP14.67□□□□□ -0.06
LIG1-215ENST00000597901 HSD11B2P80365 405 aa14.67□□□□□ -0.06
LIG1-215ENST00000597901 CCZ1BP86790 482 aa14.67□□□□□ -0.06
LIG1-215ENST00000597901 CCZ1P86791 482 aaPredicted RBP14.67□□□□□ -0.06
LIG1-215ENST00000597901 ACY1Q03154 408 aa14.67□□□□□ -0.06
LIG1-215ENST00000597901 LYPLAL1Q5VWZ2 237 aa14.67□□□□□ -0.06
LIG1-215ENST00000597901 CYB5D1Q6P9G0 228 aa14.67□□□□□ -0.06
LIG1-215ENST00000597901 NLRP9Q7RTR0 991 aa14.67□□□□□ -0.06
LIG1-215ENST00000597901 D2HGDHQ8N465 521 aa14.67□□□□□ -0.06
LIG1-215ENST00000597901 TRIM58Q8NG06 486 aa14.67□□□□□ -0.06
LIG1-215ENST00000597901 MAIP1Q8WWC4 291 aa14.67□□□□□ -0.06
LIG1-215ENST00000597901 LCN9Q8WX39 176 aa14.67□□□□□ -0.06
LIG1-215ENST00000597901 TFGQ92734 400 aaPredicted RBP14.67□□□□□ -0.06
LIG1-215ENST00000597901 ZNF778Q96MU6 729 aa14.67□□□□□ -0.06
LIG1-215ENST00000597901 FCRL4Q96PJ5 515 aa14.67□□□□□ -0.06
LIG1-215ENST00000597901 SRMSQ9H3Y6 488 aa14.67□□□□□ -0.06
LIG1-215ENST00000597901 TFB2MQ9H5Q4 396 aaKnown RBP14.67□□□□□ -0.06
LIG1-215ENST00000597901 RARRES3Q9UL19 164 aa14.67□□□□□ -0.06
LIG1-215ENST00000597901 PADI1Q9ULC6 663 aa14.67□□□□□ -0.06
LIG1-215ENST00000597901 ZKSCAN5Q9Y2L8 839 aa14.67□□□□□ -0.06
LIG1-215ENST00000597901 HEMK1Q9Y5R4 338 aaPredicted RBP14.67□□□□□ -0.06
LIG1-215ENST00000597901 RPS6KL1Q9Y6S9 549 aa14.67□□□□□ -0.06
LIG1-215ENST00000597901 SDK2Q58EX2 2172 aa14.67□□□□□ -0.06
LIG1-215ENST00000597901 TLCD2A6NGC4 264 aa14.66□□□□□ -0.06
LIG1-215ENST00000597901 BTN3A3O00478 584 aa14.66□□□□□ -0.06
LIG1-215ENST00000597901 CEP104O60308 925 aa14.66□□□□□ -0.06
LIG1-215ENST00000597901 TIAF1O95411 115 aa14.66□□□□□ -0.06
LIG1-215ENST00000597901 GOT2P00505 430 aaKnown RBP14.66□□□□□ -0.06
LIG1-215ENST00000597901 CCNYL3P0C7X3 344 aa14.66□□□□□ -0.06
LIG1-215ENST00000597901 EBLN1P0CF75 366 aa14.66□□□□□ -0.06
LIG1-215ENST00000597901 KCNJ1P48048 391 aa14.66□□□□□ -0.06
LIG1-215ENST00000597901 KPNA2P52292 529 aaKnown RBP14.66□□□□□ -0.06
LIG1-215ENST00000597901 ACVR1Q04771 509 aa14.66□□□□□ -0.06
LIG1-215ENST00000597901 PRKAA1Q13131 559 aa14.66□□□□□ -0.06
LIG1-215ENST00000597901 PRKG2Q13237 762 aa14.66□□□□□ -0.06
LIG1-215ENST00000597901 PWWP2BQ6NUJ5 590 aa14.66□□□□□ -0.06
LIG1-215ENST00000597901 BORAQ6PGQ7 559 aa14.66□□□□□ -0.06
LIG1-215ENST00000597901 FBXO38Q6PIJ6 1188 aa14.66□□□□□ -0.06
LIG1-215ENST00000597901 C4orf22Q6V702 233 aa14.66□□□□□ -0.06
LIG1-215ENST00000597901 PACS1Q6VY07 963 aa14.66□□□□□ -0.06
LIG1-215ENST00000597901 OR6P1Q8NGX9 317 aa14.66□□□□□ -0.06
LIG1-215ENST00000597901 OR4L1Q8NH43 312 aa14.66□□□□□ -0.06
LIG1-215ENST00000597901 PPM1MQ96MI6 270 aa14.66□□□□□ -0.06
LIG1-215ENST00000597901 TTC1Q99614 292 aa14.66□□□□□ -0.06
LIG1-215ENST00000597901 NRTNQ99748 197 aa14.66□□□□□ -0.06
LIG1-215ENST00000597901 FAM117AQ9C073 453 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms