RNA–Protein interactions for RNA: ENST00000593582.5

TRIM28-203, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-203ENST00000593582 OR6P1Q8NGX9 317 aa14.89□□□□□ -0.03
TRIM28-203ENST00000593582 OR4L1Q8NH43 312 aa14.89□□□□□ -0.03
TRIM28-203ENST00000593582 PEX13Q92968 403 aa14.89□□□□□ -0.03
TRIM28-203ENST00000593582 CD180Q99467 661 aa14.89□□□□□ -0.03
TRIM28-203ENST00000593582 ULBP3Q9BZM4 244 aa14.89□□□□□ -0.03
TRIM28-203ENST00000593582 SPRY4Q9C004 299 aa14.89□□□□□ -0.03
TRIM28-203ENST00000593582 OR52A5Q9H2C5 316 aa14.89□□□□□ -0.03
TRIM28-203ENST00000593582 TRIT1Q9H3H1 467 aaKnown RBP14.89□□□□□ -0.03
TRIM28-203ENST00000593582 EIF2B3Q9NR50 452 aaKnown RBP14.89□□□□□ -0.03
TRIM28-203ENST00000593582 SLC2A6Q9UGQ3 507 aa14.89□□□□□ -0.03
TRIM28-203ENST00000593582 TCAF1Q9Y4C2 921 aa14.89□□□□□ -0.03
TRIM28-203ENST00000593582 TMEM184BQ9Y519 407 aaPredicted RBP14.89□□□□□ -0.03
TRIM28-203ENST00000593582 IGHV5-51A0A0C4DH38 117 aa14.88□□□□□ -0.03
TRIM28-203ENST00000593582 UBA6A0AVT1 1052 aaPredicted RBP14.88□□□□□ -0.03
TRIM28-203ENST00000593582 OR6C74A6NCV1 312 aa14.88□□□□□ -0.03
TRIM28-203ENST00000593582 TLCD2A6NGC4 264 aa14.88□□□□□ -0.03
TRIM28-203ENST00000593582 LIN7AO14910 233 aaPredicted RBP14.88□□□□□ -0.03
TRIM28-203ENST00000593582 GOT2P00505 430 aaKnown RBP14.88□□□□□ -0.03
TRIM28-203ENST00000593582 FTH1P02794 183 aa14.88□□□□□ -0.03
TRIM28-203ENST00000593582 PRB1P04280 392 aa14.88□□□□□ -0.03
TRIM28-203ENST00000593582 ITGB2P05107 769 aa14.88□□□□□ -0.03
TRIM28-203ENST00000593582 OR56A5P0C7T3 313 aa14.88□□□□□ -0.03
TRIM28-203ENST00000593582 LIFP15018 202 aa14.88□□□□□ -0.03
TRIM28-203ENST00000593582 PPARGP37231 505 aaPredicted RBP14.88□□□□□ -0.03
TRIM28-203ENST00000593582 ARL4DP49703 201 aa14.88□□□□□ -0.03
TRIM28-203ENST00000593582 PRAMEP78395 509 aa14.88□□□□□ -0.03
TRIM28-203ENST00000593582 ACVR1Q04771 509 aa14.88□□□□□ -0.03
TRIM28-203ENST00000593582 C19orf57Q0VDD7 668 aa14.88□□□□□ -0.03
TRIM28-203ENST00000593582 PRKAA1Q13131 559 aa14.88□□□□□ -0.03
TRIM28-203ENST00000593582 COL9A2Q14055 689 aaPredicted RBP14.88□□□□□ -0.03
TRIM28-203ENST00000593582 ZNF658BQ4V348 819 aaPredicted RBP14.88□□□□□ -0.03
TRIM28-203ENST00000593582 RASGRP3Q8IV61 690 aa14.88□□□□□ -0.03
TRIM28-203ENST00000593582 ACVR1CQ8NER5 493 aa14.88□□□□□ -0.03
TRIM28-203ENST00000593582 LCN9Q8WX39 176 aa14.88□□□□□ -0.03
TRIM28-203ENST00000593582 KIAA1143Q96AT1 154 aaPredicted RBP14.88□□□□□ -0.03
TRIM28-203ENST00000593582 ZNF778Q96MU6 729 aa14.88□□□□□ -0.03
TRIM28-203ENST00000593582 FERD3LQ96RJ6 166 aa14.88□□□□□ -0.03
TRIM28-203ENST00000593582 SEMA5BQ9P283 1151 aa14.88□□□□□ -0.03
TRIM28-203ENST00000593582 SDK2Q58EX2 2172 aa14.88□□□□□ -0.03
TRIM28-203ENST00000593582 GOLGA6L3A6NEY3 463 aa14.87□□□□□ -0.03
TRIM28-203ENST00000593582 WT1P19544 449 aaPredicted RBP14.87□□□□□ -0.03
TRIM28-203ENST00000593582 PDHA2P29803 388 aa14.87□□□□□ -0.03
TRIM28-203ENST00000593582 PREPP48147 710 aa14.87□□□□□ -0.03
TRIM28-203ENST00000593582 SESN2P58004 480 aaPredicted RBP14.87□□□□□ -0.03
TRIM28-203ENST00000593582 CDK16Q00536 496 aa14.87□□□□□ -0.03
TRIM28-203ENST00000593582 PLOD1Q02809 727 aaPredicted RBP14.87□□□□□ -0.03
TRIM28-203ENST00000593582 FASTKD1Q53R41 847 aaKnown RBP14.87□□□□□ -0.03
TRIM28-203ENST00000593582 AARS2Q5JTZ9 985 aaKnown RBP14.87□□□□□ -0.03
TRIM28-203ENST00000593582 PCID2Q5JVF3 399 aa14.87□□□□□ -0.03
TRIM28-203ENST00000593582 TIPARPQ7Z3E1 657 aaKnown RBP14.87□□□□□ -0.03
TRIM28-203ENST00000593582 KMT5CQ86Y97 462 aa14.87□□□□□ -0.03
TRIM28-203ENST00000593582 ESX1Q8N693 406 aa14.87□□□□□ -0.03
TRIM28-203ENST00000593582 PRELID2Q8N945 189 aa14.87□□□□□ -0.03
TRIM28-203ENST00000593582 SIDT2Q8NBJ9 832 aaKnown RBP14.87□□□□□ -0.03
TRIM28-203ENST00000593582 OR4E2Q8NGC2 313 aa14.87□□□□□ -0.03
TRIM28-203ENST00000593582 ELMO1Q92556 727 aa14.87□□□□□ -0.03
TRIM28-203ENST00000593582 TFGQ92734 400 aaPredicted RBP14.87□□□□□ -0.03
TRIM28-203ENST00000593582 SGSM3Q96HU1 749 aa14.87□□□□□ -0.03
TRIM28-203ENST00000593582 ELMO2Q96JJ3 720 aa14.87□□□□□ -0.03
TRIM28-203ENST00000593582 SLC41A2Q96JW4 573 aa14.87□□□□□ -0.03
TRIM28-203ENST00000593582 PBKQ96KB5 322 aa14.87□□□□□ -0.03
TRIM28-203ENST00000593582 MAP3K3Q99759 626 aa14.87□□□□□ -0.03
TRIM28-203ENST00000593582 EFHD1Q9BUP0 239 aa14.87□□□□□ -0.03
TRIM28-203ENST00000593582 IL22Q9GZX6 179 aa14.87□□□□□ -0.03
TRIM28-203ENST00000593582 SRMSQ9H3Y6 488 aa14.87□□□□□ -0.03
TRIM28-203ENST00000593582 MVB12BQ9H7P6 319 aa14.87□□□□□ -0.03
TRIM28-203ENST00000593582 GPN2Q9H9Y4 310 aaPredicted RBP14.87□□□□□ -0.03
TRIM28-203ENST00000593582 PDE7BQ9NP56 450 aa14.87□□□□□ -0.03
TRIM28-203ENST00000593582 CHRAC1Q9NRG0 131 aa14.87□□□□□ -0.03
TRIM28-203ENST00000593582 BFARQ9NZS9 450 aa14.87□□□□□ -0.03
TRIM28-203ENST00000593582 ANAPC5Q9UJX4 755 aa14.87□□□□□ -0.03
TRIM28-203ENST00000593582 PRSS21Q9Y6M0 314 aa14.87□□□□□ -0.03
TRIM28-203ENST00000593582 MATN2O00339 956 aa14.86□□□□□ -0.03
TRIM28-203ENST00000593582 OR1I1O60431 355 aa14.86□□□□□ -0.03
TRIM28-203ENST00000593582 DLGAP3O95886 979 aa14.86□□□□□ -0.03
TRIM28-203ENST00000593582 FGF5P12034 268 aa14.86□□□□□ -0.03
TRIM28-203ENST00000593582 NPY2RP49146 381 aa14.86□□□□□ -0.03
TRIM28-203ENST00000593582 HSD11B2P80365 405 aa14.86□□□□□ -0.03
TRIM28-203ENST00000593582 ACY1Q03154 408 aa14.86□□□□□ -0.03
TRIM28-203ENST00000593582 ABHD18Q0P651 414 aa14.86□□□□□ -0.03
TRIM28-203ENST00000593582 TUBB3Q13509 450 aa14.86□□□□□ -0.03
TRIM28-203ENST00000593582 LY6DQ14210 128 aa14.86□□□□□ -0.03
TRIM28-203ENST00000593582 MAP7Q14244 749 aa14.86□□□□□ -0.03
TRIM28-203ENST00000593582 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.86□□□□□ -0.03
TRIM28-203ENST00000593582 SYTL3Q4VX76 610 aa14.86□□□□□ -0.03
TRIM28-203ENST00000593582 PPP1R3BQ86XI6 285 aa14.86□□□□□ -0.03
TRIM28-203ENST00000593582 CARFQ8N187 725 aa14.86□□□□□ -0.03
TRIM28-203ENST00000593582 EXTL1Q92935 676 aa14.86□□□□□ -0.03
TRIM28-203ENST00000593582 NAP1L3Q99457 506 aaPredicted RBP14.86□□□□□ -0.03
TRIM28-203ENST00000593582 ARHGAP9Q9BRR9 750 aa14.86□□□□□ -0.03
TRIM28-203ENST00000593582 TSSK1BQ9BXA7 367 aa14.86□□□□□ -0.03
TRIM28-203ENST00000593582 TFB2MQ9H5Q4 396 aaKnown RBP14.86□□□□□ -0.03
TRIM28-203ENST00000593582 ZNF891A8MT65 544 aaPredicted RBP14.85□□□□□ -0.03
TRIM28-203ENST00000593582 ZSCAN12O43309 604 aa14.85□□□□□ -0.03
TRIM28-203ENST00000593582 C1QL1O75973 258 aa14.85□□□□□ -0.03
TRIM28-203ENST00000593582 ZBTB11O95625 1053 aaPredicted RBP14.85□□□□□ -0.03
TRIM28-203ENST00000593582 FOLR1P15328 257 aa14.85□□□□□ -0.03
TRIM28-203ENST00000593582 ZNF28P17035 718 aa14.85□□□□□ -0.03
TRIM28-203ENST00000593582 POLR2CP19387 275 aaPredicted RBP14.85□□□□□ -0.03
TRIM28-203ENST00000593582 TPSB2P20231 275 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms