RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 RANGRFQ9HD47 186 aaPredicted RBP4.83□□□□□ -1.64
SMAD4-216ENST00000593223 INTS10Q9NVR2 710 aaKnown RBP4.83□□□□□ -1.64
SMAD4-216ENST00000593223 ABI3Q9P2A4 366 aa4.83□□□□□ -1.64
SMAD4-216ENST00000593223 SH3BGRL2Q9UJC5 107 aa4.83□□□□□ -1.64
SMAD4-216ENST00000593223 FBXL5Q9UKA1 691 aa4.83□□□□□ -1.64
SMAD4-216ENST00000593223 KCNS2Q9ULS6 477 aa4.83□□□□□ -1.64
SMAD4-216ENST00000593223 KIF3AQ9Y496 699 aa4.83□□□□□ -1.64
SMAD4-216ENST00000593223 LOXL2Q9Y4K0 774 aa4.83□□□□□ -1.64
SMAD4-216ENST00000593223 PSAT1Q9Y617 370 aa4.83□□□□□ -1.64
SMAD4-216ENST00000593223 RGPD8O14715 1765 aaPredicted RBP4.83□□□□□ -1.64
SMAD4-216ENST00000593223 CRYBG1Q9Y4K1 1723 aa4.83□□□□□ -1.64
SMAD4-216ENST00000593223 ERBINQ96RT1 1412 aa4.82□□□□□ -1.64
SMAD4-216ENST00000593223 FLT1P17948 1338 aa4.82□□□□□ -1.64
SMAD4-216ENST00000593223 VCANP13611 3396 aa4.82□□□□□ -1.64
SMAD4-216ENST00000593223 A0A0G2JPF8 293 aa4.82□□□□□ -1.64
SMAD4-216ENST00000593223 HNRNPCL3B7ZW38 293 aa4.82□□□□□ -1.64
SMAD4-216ENST00000593223 CASQ2O14958 399 aaPredicted RBP4.82□□□□□ -1.64
SMAD4-216ENST00000593223 EIF2S1P05198 315 aaKnown RBP4.82□□□□□ -1.64
SMAD4-216ENST00000593223 LINC00271P0C7V0 271 aa4.82□□□□□ -1.64
SMAD4-216ENST00000593223 HNRNPCL4P0DMR1 293 aa4.82□□□□□ -1.64
SMAD4-216ENST00000593223 IL4RP24394 825 aa4.82□□□□□ -1.64
SMAD4-216ENST00000593223 HOXD13P35453 343 aa4.82□□□□□ -1.64
SMAD4-216ENST00000593223 ACTN2P35609 894 aa4.82□□□□□ -1.64
SMAD4-216ENST00000593223 RPL36AP83881 106 aaKnown RBP4.82□□□□□ -1.64
SMAD4-216ENST00000593223 TFCP2Q12800 502 aa4.82□□□□□ -1.64
SMAD4-216ENST00000593223 WTAPQ15007 396 aa4.82□□□□□ -1.64
SMAD4-216ENST00000593223 KLHL22Q53GT1 634 aa4.82□□□□□ -1.64
SMAD4-216ENST00000593223 TTI2Q6NXR4 508 aa4.82□□□□□ -1.64
SMAD4-216ENST00000593223 ALKBH5Q6P6C2 394 aaKnown RBP4.82□□□□□ -1.64
SMAD4-216ENST00000593223 CACNA2D4Q7Z3S7 1137 aa4.82□□□□□ -1.64
SMAD4-216ENST00000593223 PXKQ7Z7A4 578 aa4.82□□□□□ -1.64
SMAD4-216ENST00000593223 SFR1Q86XK3 245 aa4.82□□□□□ -1.64
SMAD4-216ENST00000593223 TBC1D21Q8IYX1 336 aa4.82□□□□□ -1.64
SMAD4-216ENST00000593223 OR8H3Q8N146 312 aa4.82□□□□□ -1.64
SMAD4-216ENST00000593223 KCNH5Q8NCM2 988 aa4.82□□□□□ -1.64
SMAD4-216ENST00000593223 GOT1L1Q8NHS2 421 aaPredicted RBP4.82□□□□□ -1.64
SMAD4-216ENST00000593223 UTP15Q8TED0 518 aaKnown RBP4.82□□□□□ -1.64
SMAD4-216ENST00000593223 ARHGEF2Q92974 986 aaKnown RBP4.82□□□□□ -1.64
SMAD4-216ENST00000593223 IGSF8Q969P0 613 aa4.82□□□□□ -1.64
SMAD4-216ENST00000593223 ARHGEF26Q96DR7 871 aa4.82□□□□□ -1.64
SMAD4-216ENST00000593223 WDFY2Q96P53 400 aa4.82□□□□□ -1.64
SMAD4-216ENST00000593223 ACOX2Q99424 681 aa4.82□□□□□ -1.64
SMAD4-216ENST00000593223 CMKLR1Q99788 373 aa4.82□□□□□ -1.64
SMAD4-216ENST00000593223 OR10A4Q9H209 315 aa4.82□□□□□ -1.64
SMAD4-216ENST00000593223 RPAP3Q9H6T3 665 aaPredicted RBP4.82□□□□□ -1.64
SMAD4-216ENST00000593223 MMP25Q9NPA2 562 aa4.82□□□□□ -1.64
SMAD4-216ENST00000593223 ACSS1Q9NUB1 689 aaPredicted RBP4.82□□□□□ -1.64
SMAD4-216ENST00000593223 MCM9Q9NXL9 1143 aa4.82□□□□□ -1.64
SMAD4-216ENST00000593223 MOSPD1Q9UJG1 213 aa4.82□□□□□ -1.64
SMAD4-216ENST00000593223 LRP12Q9Y561 859 aa4.82□□□□□ -1.64
SMAD4-216ENST00000593223 ANGPTL3Q9Y5C1 460 aa4.82□□□□□ -1.64
SMAD4-216ENST00000593223 SNX8Q9Y5X2 465 aa4.82□□□□□ -1.64
SMAD4-216ENST00000593223 LTBP1Q14766 1721 aa4.82□□□□□ -1.64
SMAD4-216ENST00000593223 TAF1P21675 1872 aa4.81□□□□□ -1.64
SMAD4-216ENST00000593223 PLEKHH1Q9ULM0 1364 aa4.81□□□□□ -1.64
SMAD4-216ENST00000593223 ALS2Q96Q42 1657 aa4.81□□□□□ -1.64
SMAD4-216ENST00000593223 EME2A4GXA9 379 aaPredicted RBP4.81□□□□□ -1.64
SMAD4-216ENST00000593223 GOLGA6L9A6NEM1 432 aa4.81□□□□□ -1.64
SMAD4-216ENST00000593223 MID1O15344 667 aa4.81□□□□□ -1.64
SMAD4-216ENST00000593223 SLC16A5O15375 505 aa4.81□□□□□ -1.64
SMAD4-216ENST00000593223 SLC7A4O43246 635 aa4.81□□□□□ -1.64
SMAD4-216ENST00000593223 NDUFS3O75489 264 aa4.81□□□□□ -1.64
SMAD4-216ENST00000593223 ADRB2P07550 413 aa4.81□□□□□ -1.64
SMAD4-216ENST00000593223 SNRNP70P08621 437 aaKnown RBP4.81□□□□□ -1.64
SMAD4-216ENST00000593223 PPARGP37231 505 aaPredicted RBP4.81□□□□□ -1.64
SMAD4-216ENST00000593223 TMPOP42166 694 aaKnown RBP4.81□□□□□ -1.64
SMAD4-216ENST00000593223 NLRP5P59047 1200 aa4.81□□□□□ -1.64
SMAD4-216ENST00000593223 PDE1BQ01064 536 aa4.81□□□□□ -1.64
SMAD4-216ENST00000593223 DMTNQ08495 405 aa4.81□□□□□ -1.64
SMAD4-216ENST00000593223 BFSP1Q12934 665 aa4.81□□□□□ -1.64
SMAD4-216ENST00000593223 GRIK2Q13002 908 aa4.81□□□□□ -1.64
SMAD4-216ENST00000593223 NAB2Q15742 525 aa4.81□□□□□ -1.64
SMAD4-216ENST00000593223 ANKDD1AQ495B1 522 aa4.81□□□□□ -1.64
SMAD4-216ENST00000593223 KCNT1Q5JUK3 1230 aa4.81□□□□□ -1.64
SMAD4-216ENST00000593223 UNQ6126/PRO20091Q6UXV3 157 aa4.81□□□□□ -1.64
SMAD4-216ENST00000593223 DPPA4Q7L190 304 aa4.81□□□□□ -1.64
SMAD4-216ENST00000593223 ADSSL1Q8N142 457 aa4.81□□□□□ -1.64
SMAD4-216ENST00000593223 SPC24Q8NBT2 197 aa4.81□□□□□ -1.64
SMAD4-216ENST00000593223 CTNNBL1Q8WYA6 563 aaPredicted RBP4.81□□□□□ -1.64
SMAD4-216ENST00000593223 POMGNT1Q8WZA1 660 aa4.81□□□□□ -1.64
SMAD4-216ENST00000593223 FIG4Q92562 907 aa4.81□□□□□ -1.64
SMAD4-216ENST00000593223 CDCA5Q96FF9 252 aa4.81□□□□□ -1.64
SMAD4-216ENST00000593223 ZNF830Q96NB3 372 aaPredicted RBP4.81□□□□□ -1.64
SMAD4-216ENST00000593223 IL17FQ96PD4 163 aa4.81□□□□□ -1.64
SMAD4-216ENST00000593223 MTERF1Q99551 399 aaKnown RBP4.81□□□□□ -1.64
SMAD4-216ENST00000593223 DDX31Q9H8H2 851 aaKnown RBP4.81□□□□□ -1.64
SMAD4-216ENST00000593223 FANCFQ9NPI8 374 aa4.81□□□□□ -1.64
SMAD4-216ENST00000593223 CCDC177Q9NQR7 707 aaPredicted RBP4.81□□□□□ -1.64
SMAD4-216ENST00000593223 C1RLQ9NZP8 487 aa4.81□□□□□ -1.64
SMAD4-216ENST00000593223 C6orf203Q9P0P8 240 aaPredicted RBP4.81□□□□□ -1.64
SMAD4-216ENST00000593223 PCDHAC2Q9Y5I4 1007 aa4.81□□□□□ -1.64
SMAD4-216ENST00000593223 USP6P35125 1406 aa4.8□□□□□ -1.64
SMAD4-216ENST00000593223 SPATA31E1Q6ZUB1 1445 aa4.8□□□□□ -1.64
SMAD4-216ENST00000593223 TRPM3Q9HCF6 1732 aaPredicted RBP4.8□□□□□ -1.64
SMAD4-216ENST00000593223 C1orf226A1L170 272 aa4.8□□□□□ -1.64
SMAD4-216ENST00000593223 PRSS44E7EML9 344 aa4.8□□□□□ -1.64
SMAD4-216ENST00000593223 BOLA2-SMG1P6H3BVE0 249 aa4.8□□□□□ -1.64
SMAD4-216ENST00000593223 CAPN9O14815 690 aa4.8□□□□□ -1.64
SMAD4-216ENST00000593223 SPINT2O43291 252 aa4.8□□□□□ -1.64
SMAD4-216ENST00000593223 JRKO75564 520 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms