RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 ZNF217O75362 1048 aa13.22□□□□□ -0.29
VMP1-217ENST00000593168 H2AFYO75367 372 aaKnown RBP13.22□□□□□ -0.29
VMP1-217ENST00000593168 SERPINE1P05121 402 aa13.22□□□□□ -0.29
VMP1-217ENST00000593168 HOXC4P09017 264 aaPredicted RBP13.22□□□□□ -0.29
VMP1-217ENST00000593168 GPR89BP0CG08 455 aa13.22□□□□□ -0.29
VMP1-217ENST00000593168 TPBGLP0DKB5 382 aa13.22□□□□□ -0.29
VMP1-217ENST00000593168 KCNC1P48547 511 aa13.22□□□□□ -0.29
VMP1-217ENST00000593168 CTSCP53634 463 aa13.22□□□□□ -0.29
VMP1-217ENST00000593168 BST1Q10588 318 aa13.22□□□□□ -0.29
VMP1-217ENST00000593168 STX3Q13277 289 aa13.22□□□□□ -0.29
VMP1-217ENST00000593168 OR4D1Q15615 310 aa13.22□□□□□ -0.29
VMP1-217ENST00000593168 LIPMQ5VYY2 423 aa13.22□□□□□ -0.29
VMP1-217ENST00000593168 ANO7Q6IWH7 933 aa13.22□□□□□ -0.29
VMP1-217ENST00000593168 TMEM220Q6QAJ8 160 aa13.22□□□□□ -0.29
VMP1-217ENST00000593168 CYHR1Q6ZMK1 362 aa13.22□□□□□ -0.29
VMP1-217ENST00000593168 HEATR4Q86WZ0 1026 aa13.22□□□□□ -0.29
VMP1-217ENST00000593168 SLC22A9Q8IVM8 553 aa13.22□□□□□ -0.29
VMP1-217ENST00000593168 MYO1HQ8N1T3 1032 aa13.22□□□□□ -0.29
VMP1-217ENST00000593168 PPP1R14CQ8TAE6 165 aa13.22□□□□□ -0.29
VMP1-217ENST00000593168 BCAS4Q8TDM0 211 aa13.22□□□□□ -0.29
VMP1-217ENST00000593168 NAT14Q8WUY8 206 aa13.22□□□□□ -0.29
VMP1-217ENST00000593168 ASZ1Q8WWH4 475 aa13.22□□□□□ -0.29
VMP1-217ENST00000593168 KLK6Q92876 244 aa13.22□□□□□ -0.29
VMP1-217ENST00000593168 GRAMD1AQ96CP6 724 aa13.22□□□□□ -0.29
VMP1-217ENST00000593168 LINC00615Q96LM1 132 aaPredicted RBP13.22□□□□□ -0.29
VMP1-217ENST00000593168 CCM2Q9BSQ5 444 aa13.22□□□□□ -0.29
VMP1-217ENST00000593168 OR2AG1Q9H205 316 aa13.22□□□□□ -0.29
VMP1-217ENST00000593168 CD93Q9NPY3 652 aa13.22□□□□□ -0.29
VMP1-217ENST00000593168 PHPT1Q9NRX4 125 aaPredicted RBP13.22□□□□□ -0.29
VMP1-217ENST00000593168 THAP1Q9NVV9 213 aa13.22□□□□□ -0.29
VMP1-217ENST00000593168 ATXN10Q9UBB4 475 aa13.22□□□□□ -0.29
VMP1-217ENST00000593168 TMCO1Q9UM00 188 aa13.22□□□□□ -0.29
VMP1-217ENST00000593168 ATRXP46100 2492 aa13.22□□□□□ -0.29
VMP1-217ENST00000593168 IGF2RP11717 2491 aa13.21□□□□□ -0.29
VMP1-217ENST00000593168 C17orf113A0A1B0GUU1 675 aa13.21□□□□□ -0.29
VMP1-217ENST00000593168 OR2AG2A6NM03 316 aa13.21□□□□□ -0.29
VMP1-217ENST00000593168 PATE3B3GLJ2 98 aa13.21□□□□□ -0.29
VMP1-217ENST00000593168 CDC7O00311 574 aa13.21□□□□□ -0.29
VMP1-217ENST00000593168 RAD51BO15315 384 aa13.21□□□□□ -0.29
VMP1-217ENST00000593168 LATO43561 262 aa13.21□□□□□ -0.29
VMP1-217ENST00000593168 SMIM24O75264 130 aa13.21□□□□□ -0.29
VMP1-217ENST00000593168 SNNO75324 88 aaPredicted RBP13.21□□□□□ -0.29
VMP1-217ENST00000593168 GPC4O75487 556 aa13.21□□□□□ -0.29
VMP1-217ENST00000593168 APBB3O95704 486 aa13.21□□□□□ -0.29
VMP1-217ENST00000593168 SEMA4FO95754 770 aa13.21□□□□□ -0.29
VMP1-217ENST00000593168 MPC1LP0DKB6 136 aa13.21□□□□□ -0.29
VMP1-217ENST00000593168 PPP2CBP62714 309 aa13.21□□□□□ -0.29
VMP1-217ENST00000593168 PPP2CAP67775 309 aa13.21□□□□□ -0.29
VMP1-217ENST00000593168 NFKB2Q00653 900 aa13.21□□□□□ -0.29
VMP1-217ENST00000593168 INPP5AQ14642 412 aa13.21□□□□□ -0.29
VMP1-217ENST00000593168 TSNQ15631 228 aaKnown RBP13.21□□□□□ -0.29
VMP1-217ENST00000593168 NEK10Q6ZWH5 1172 aa13.21□□□□□ -0.29
VMP1-217ENST00000593168 ADAMTSL2Q86TH1 951 aa13.21□□□□□ -0.29
VMP1-217ENST00000593168 TRIM74Q86UV6 250 aa13.21□□□□□ -0.29
VMP1-217ENST00000593168 ELMO1Q92556 727 aa13.21□□□□□ -0.29
VMP1-217ENST00000593168 FUBP1Q96AE4 644 aaKnown RBP13.21□□□□□ -0.29
VMP1-217ENST00000593168 C7orf26Q96N11 449 aa13.21□□□□□ -0.29
VMP1-217ENST00000593168 GATA5Q9BWX5 397 aaPredicted RBP13.21□□□□□ -0.29
VMP1-217ENST00000593168 TPSD1Q9BZJ3 242 aa13.21□□□□□ -0.29
VMP1-217ENST00000593168 WDR26Q9H7D7 661 aa13.21□□□□□ -0.29
VMP1-217ENST00000593168 SLCO1B3Q9NPD5 702 aa13.21□□□□□ -0.29
VMP1-217ENST00000593168 FGFR1OP2Q9NVK5 253 aa13.21□□□□□ -0.29
VMP1-217ENST00000593168 WSB2Q9NYS7 404 aaPredicted RBP13.21□□□□□ -0.29
VMP1-217ENST00000593168 IKZF3Q9UKT9 509 aa13.21□□□□□ -0.29
VMP1-217ENST00000593168 DNMT3AQ9Y6K1 912 aaPredicted RBP13.21□□□□□ -0.29
VMP1-217ENST00000593168 BPTFQ12830 3046 aa13.21□□□□□ -0.3
VMP1-217ENST00000593168 DOCK9Q9BZ29 2069 aa13.2□□□□□ -0.3
VMP1-217ENST00000593168 TMEM114B3SHH9 223 aa13.2□□□□□ -0.3
VMP1-217ENST00000593168 BTN3A1O00481 513 aa13.2□□□□□ -0.3
VMP1-217ENST00000593168 NDUFAB1O14561 156 aa13.2□□□□□ -0.3
VMP1-217ENST00000593168 CDX4O14627 284 aaPredicted RBP13.2□□□□□ -0.3
VMP1-217ENST00000593168 CHUKO15111 745 aa13.2□□□□□ -0.3
VMP1-217ENST00000593168 SLC31A1O15431 190 aa13.2□□□□□ -0.3
VMP1-217ENST00000593168 KLK8O60259 260 aa13.2□□□□□ -0.3
VMP1-217ENST00000593168 IPO13O94829 963 aaKnown RBP13.2□□□□□ -0.3
VMP1-217ENST00000593168 SLCO2B1O94956 709 aa13.2□□□□□ -0.3
VMP1-217ENST00000593168 MYCLP1P12525 358 aaPredicted RBP13.2□□□□□ -0.3
VMP1-217ENST00000593168 MTHFD2P13995 350 aa13.2□□□□□ -0.3
VMP1-217ENST00000593168 ZNF8P17098 575 aaPredicted RBP13.2□□□□□ -0.3
VMP1-217ENST00000593168 HNRNPA2B1P22626 353 aaKnown RBP13.2□□□□□ -0.3
VMP1-217ENST00000593168 CD6P30203 668 aa13.2□□□□□ -0.3
VMP1-217ENST00000593168 MAT2AP31153 395 aaKnown RBP13.2□□□□□ -0.3
VMP1-217ENST00000593168 IGFALSP35858 605 aa13.2□□□□□ -0.3
VMP1-217ENST00000593168 NUDT1P36639 197 aa13.2□□□□□ -0.3
VMP1-217ENST00000593168 CCR5P51681 352 aa13.2□□□□□ -0.3
VMP1-217ENST00000593168 OCRLQ01968 901 aa13.2□□□□□ -0.3
VMP1-217ENST00000593168 PLOD1Q02809 727 aaPredicted RBP13.2□□□□□ -0.3
VMP1-217ENST00000593168 HSPA14Q0VDF9 509 aa13.2□□□□□ -0.3
VMP1-217ENST00000593168 PMS2CLQ68D20 193 aa13.2□□□□□ -0.3
VMP1-217ENST00000593168 PIWIL4Q7Z3Z4 852 aaKnown RBP13.2□□□□□ -0.3
VMP1-217ENST00000593168 PIGWQ7Z7B1 504 aa13.2□□□□□ -0.3
VMP1-217ENST00000593168 BEND7Q8N7W2 519 aaPredicted RBP13.2□□□□□ -0.3
VMP1-217ENST00000593168 ZNF473Q8WTR7 871 aaKnown RBP13.2□□□□□ -0.3
VMP1-217ENST00000593168 GATA6Q92908 595 aa13.2□□□□□ -0.3
VMP1-217ENST00000593168 FOXJ1Q92949 421 aa13.2□□□□□ -0.3
VMP1-217ENST00000593168 LGR4Q9BXB1 951 aa13.2□□□□□ -0.3
VMP1-217ENST00000593168 TMEM9BQ9NQ34 198 aa13.2□□□□□ -0.3
VMP1-217ENST00000593168 RNF112Q9ULX5 631 aa13.2□□□□□ -0.3
VMP1-217ENST00000593168 ZFYVE26Q68DK2 2539 aa13.19□□□□□ -0.3
VMP1-217ENST00000593168 SLC5A10A0PJK1 596 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms