RNA–Protein interactions for RNA: ENST00000592942.1

TRIM47-206, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 793 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-206ENST00000592942 DPH5Q9H2P9 285 aa14.95□□□□□ -0.02
TRIM47-206ENST00000592942 STN1Q9H668 368 aaKnown RBP14.95□□□□□ -0.02
TRIM47-206ENST00000592942 VPS37BQ9H9H4 285 aa14.95□□□□□ -0.02
TRIM47-206ENST00000592942 EPB41L5Q9HCM4 733 aa14.95□□□□□ -0.02
TRIM47-206ENST00000592942 IMP3Q9NV31 184 aaKnown RBP14.95□□□□□ -0.02
TRIM47-206ENST00000592942 WHRNQ9P202 907 aa14.95□□□□□ -0.02
TRIM47-206ENST00000592942 GALPQ9UBC7 116 aa14.95□□□□□ -0.02
TRIM47-206ENST00000592942 SATB2Q9UPW6 733 aa14.95□□□□□ -0.02
TRIM47-206ENST00000592942 MRFAP1Q9Y605 127 aa14.95□□□□□ -0.02
TRIM47-206ENST00000592942 ATRXP46100 2492 aa14.94□□□□□ -0.02
TRIM47-206ENST00000592942 DMXL2Q8TDJ6 3036 aa14.94□□□□□ -0.02
TRIM47-206ENST00000592942 TMX2-CTNND1H3BSU7 103 aa14.94□□□□□ -0.02
TRIM47-206ENST00000592942 UBXN7O94888 489 aa14.94□□□□□ -0.02
TRIM47-206ENST00000592942 SLC35G4P0C7Q5 338 aa14.94□□□□□ -0.02
TRIM47-206ENST00000592942 THRAP10827 490 aa14.94□□□□□ -0.02
TRIM47-206ENST00000592942 TYRP1P17643 537 aa14.94□□□□□ -0.02
TRIM47-206ENST00000592942 GABRB3P28472 473 aa14.94□□□□□ -0.02
TRIM47-206ENST00000592942 FMO4P31512 558 aa14.94□□□□□ -0.02
TRIM47-206ENST00000592942 TUBB2AQ13885 445 aa14.94□□□□□ -0.02
TRIM47-206ENST00000592942 C16orf72Q14CZ0 275 aa14.94□□□□□ -0.02
TRIM47-206ENST00000592942 FASTKD3Q14CZ7 662 aaKnown RBP14.94□□□□□ -0.02
TRIM47-206ENST00000592942 HSP90AA5PQ58FG0 334 aa14.94□□□□□ -0.02
TRIM47-206ENST00000592942 DNAJC21Q5F1R6 531 aaKnown RBP14.94□□□□□ -0.02
TRIM47-206ENST00000592942 STEAP4Q687X5 459 aa14.94□□□□□ -0.02
TRIM47-206ENST00000592942 UNC5AQ6ZN44 842 aa14.94□□□□□ -0.02
TRIM47-206ENST00000592942 LRRC6Q86X45 466 aa14.94□□□□□ -0.02
TRIM47-206ENST00000592942 SPNS2Q8IVW8 549 aa14.94□□□□□ -0.02
TRIM47-206ENST00000592942 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.94□□□□□ -0.02
TRIM47-206ENST00000592942 NCSTNQ92542 709 aa14.94□□□□□ -0.02
TRIM47-206ENST00000592942 AHCYL2Q96HN2 611 aaKnown RBP14.94□□□□□ -0.02
TRIM47-206ENST00000592942 NAT9Q9BTE0 207 aa14.94□□□□□ -0.02
TRIM47-206ENST00000592942 LRRC1Q9BTT6 524 aa14.94□□□□□ -0.02
TRIM47-206ENST00000592942 TUBB2BQ9BVA1 445 aa14.94□□□□□ -0.02
TRIM47-206ENST00000592942 POLR1BQ9H9Y6 1135 aa14.94□□□□□ -0.02
TRIM47-206ENST00000592942 C20orf96Q9NUD7 363 aaPredicted RBP14.94□□□□□ -0.02
TRIM47-206ENST00000592942 CRYL1Q9Y2S2 319 aa14.94□□□□□ -0.02
TRIM47-206ENST00000592942 PCDHGA8Q9Y5G5 932 aa14.94□□□□□ -0.02
TRIM47-206ENST00000592942 CCDC187A0A096LP49 1063 aa14.93□□□□□ -0.02
TRIM47-206ENST00000592942 DUX1O43812 170 aa14.93□□□□□ -0.02
TRIM47-206ENST00000592942 BRINP1O60477 761 aa14.93□□□□□ -0.02
TRIM47-206ENST00000592942 DXOO77932 396 aaKnown RBP14.93□□□□□ -0.02
TRIM47-206ENST00000592942 SLCO2B1O94956 709 aa14.93□□□□□ -0.02
TRIM47-206ENST00000592942 TTC4O95801 387 aa14.93□□□□□ -0.02
TRIM47-206ENST00000592942 C9P02748 559 aa14.93□□□□□ -0.02
TRIM47-206ENST00000592942 TPBGLP0DKB5 382 aa14.93□□□□□ -0.02
TRIM47-206ENST00000592942 ERVK-10P10266 1014 aa14.93□□□□□ -0.02
TRIM47-206ENST00000592942 ARL4CP56559 192 aa14.93□□□□□ -0.02
TRIM47-206ENST00000592942 GABREP78334 506 aa14.93□□□□□ -0.02
TRIM47-206ENST00000592942 SLC7A5Q01650 507 aa14.93□□□□□ -0.02
TRIM47-206ENST00000592942 CKAP4Q07065 602 aaKnown RBP14.93□□□□□ -0.02
TRIM47-206ENST00000592942 HIF1AQ16665 826 aa14.93□□□□□ -0.02
TRIM47-206ENST00000592942 MAP9Q49MG5 647 aa14.93□□□□□ -0.02
TRIM47-206ENST00000592942 C3orf38Q5JPI3 329 aa14.93□□□□□ -0.02
TRIM47-206ENST00000592942 SPANXN3Q5MJ09 141 aa14.93□□□□□ -0.02
TRIM47-206ENST00000592942 ZNF549Q6P9A3 640 aa14.93□□□□□ -0.02
TRIM47-206ENST00000592942 IGF2-ASQ6U949 168 aa14.93□□□□□ -0.02
TRIM47-206ENST00000592942 ZDHHC24Q6UX98 284 aa14.93□□□□□ -0.02
TRIM47-206ENST00000592942 ARHGAP22Q7Z5H3 698 aa14.93□□□□□ -0.02
TRIM47-206ENST00000592942 RCBTB1Q8NDN9 531 aa14.93□□□□□ -0.02
TRIM47-206ENST00000592942 WDR36Q8NI36 951 aaKnown RBP14.93□□□□□ -0.02
TRIM47-206ENST00000592942 RSC1A1Q92681 617 aa14.93□□□□□ -0.02
TRIM47-206ENST00000592942 TFGQ92734 400 aaPredicted RBP14.93□□□□□ -0.02
TRIM47-206ENST00000592942 ART4Q93070 314 aa14.93□□□□□ -0.02
TRIM47-206ENST00000592942 LRRC39Q96DD0 335 aa14.93□□□□□ -0.02
TRIM47-206ENST00000592942 CCDC74BQ96LY2 380 aa14.93□□□□□ -0.02
TRIM47-206ENST00000592942 SLC46A1Q96NT5 459 aa14.93□□□□□ -0.02
TRIM47-206ENST00000592942 DPYSL5Q9BPU6 564 aa14.93□□□□□ -0.02
TRIM47-206ENST00000592942 EPB41L1Q9H4G0 881 aa14.93□□□□□ -0.02
TRIM47-206ENST00000592942 CCDC86Q9H6F5 360 aaKnown RBP14.93□□□□□ -0.02
TRIM47-206ENST00000592942 KIR3DX1Q9H7L2 352 aa14.93□□□□□ -0.02
TRIM47-206ENST00000592942 ASCL3Q9NQ33 180 aa14.93□□□□□ -0.02
TRIM47-206ENST00000592942 LATS2Q9NRM7 1088 aa14.93□□□□□ -0.02
TRIM47-206ENST00000592942 INTS10Q9NVR2 710 aaKnown RBP14.93□□□□□ -0.02
TRIM47-206ENST00000592942 SLC24A2Q9UI40 661 aa14.93□□□□□ -0.02
TRIM47-206ENST00000592942 FBXO5Q9UKT4 447 aa14.93□□□□□ -0.02
TRIM47-206ENST00000592942 CHMP2BQ9UQN3 213 aa14.93□□□□□ -0.02
TRIM47-206ENST00000592942 MED16Q9Y2X0 877 aa14.93□□□□□ -0.02
TRIM47-206ENST00000592942 UBA6A0AVT1 1052 aaPredicted RBP14.92□□□□□ -0.02
TRIM47-206ENST00000592942 NIPSNAP2O75323 286 aa14.92□□□□□ -0.02
TRIM47-206ENST00000592942 HAUS5O94927 633 aa14.92□□□□□ -0.02
TRIM47-206ENST00000592942 ESR1P03372 595 aa14.92□□□□□ -0.02
TRIM47-206ENST00000592942 HGFP14210 728 aa14.92□□□□□ -0.02
TRIM47-206ENST00000592942 SLC1A2P43004 574 aa14.92□□□□□ -0.02
TRIM47-206ENST00000592942 MAPK9P45984 424 aa14.92□□□□□ -0.02
TRIM47-206ENST00000592942 CSE1LP55060 971 aaKnown RBP14.92□□□□□ -0.02
TRIM47-206ENST00000592942 GFERP55789 205 aa14.92□□□□□ -0.02
TRIM47-206ENST00000592942 EIF3BP55884 814 aaKnown RBP14.92□□□□□ -0.02
TRIM47-206ENST00000592942 PDIA2Q13087 525 aaKnown RBP14.92□□□□□ -0.02
TRIM47-206ENST00000592942 TRA2AQ13595 282 aaKnown RBP eCLIP14.92□□□□□ -0.02
TRIM47-206ENST00000592942 THOC5Q13769 683 aaKnown RBP14.92□□□□□ -0.02
TRIM47-206ENST00000592942 BOP1Q14137 746 aaKnown RBP14.92□□□□□ -0.02
TRIM47-206ENST00000592942 GBX1Q14549 363 aa14.92□□□□□ -0.02
TRIM47-206ENST00000592942 DNTTIP2Q5QJE6 756 aaKnown RBP14.92□□□□□ -0.02
TRIM47-206ENST00000592942 PHF19Q5T6S3 580 aa14.92□□□□□ -0.02
TRIM47-206ENST00000592942 RNF187Q5TA31 235 aaPredicted RBP14.92□□□□□ -0.02
TRIM47-206ENST00000592942 ZNF470Q6ECI4 717 aa14.92□□□□□ -0.02
TRIM47-206ENST00000592942 PTRHD1Q6GMV3 140 aaKnown RBP14.92□□□□□ -0.02
TRIM47-206ENST00000592942 TRMT10BQ6PF06 316 aaKnown RBP14.92□□□□□ -0.02
TRIM47-206ENST00000592942 RAB11FIP2Q7L804 512 aa14.92□□□□□ -0.02
TRIM47-206ENST00000592942 PDZD3Q86UT5 571 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 145 ms