RNA–Protein interactions for RNA: ENST00000592412.5

CIRBP-238, Transcript of cold inducible RNA binding protein, humanhuman

TSL 4

Gene CIRBP, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-238ENST00000592412 GPR83Q9NYM4 423 aa17.77■□□□□ 0.44
CIRBP-238ENST00000592412 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.77■□□□□ 0.44
CIRBP-238ENST00000592412 HACD3Q9P035 362 aa17.77■□□□□ 0.44
CIRBP-238ENST00000592412 ACSL5Q9ULC5 683 aa17.77■□□□□ 0.44
CIRBP-238ENST00000592412 TMEM150CB9EJG8 249 aa17.76■□□□□ 0.43
CIRBP-238ENST00000592412 GOLGA6L22H0YM25 854 aa17.76■□□□□ 0.43
CIRBP-238ENST00000592412 MSL3P1P0C860 447 aa17.76■□□□□ 0.43
CIRBP-238ENST00000592412 ST6GAL1P15907 406 aa17.76■□□□□ 0.43
CIRBP-238ENST00000592412 HLA-DPA1P20036 260 aa17.76■□□□□ 0.43
CIRBP-238ENST00000592412 CDKN2BP42772 138 aa17.76■□□□□ 0.43
CIRBP-238ENST00000592412 LONRF2Q1L5Z9 754 aa17.76■□□□□ 0.43
CIRBP-238ENST00000592412 PLEKHN1Q494U1 663 aaPredicted RBP17.76■□□□□ 0.43
CIRBP-238ENST00000592412 LRRC38Q5VT99 294 aa17.76■□□□□ 0.43
CIRBP-238ENST00000592412 MED25Q71SY5 747 aa17.76■□□□□ 0.43
CIRBP-238ENST00000592412 MAMDC2Q7Z304 686 aaPredicted RBP17.76■□□□□ 0.43
CIRBP-238ENST00000592412 HPS6Q86YV9 775 aa17.76■□□□□ 0.43
CIRBP-238ENST00000592412 ZNF567Q8N184 647 aa17.76■□□□□ 0.43
CIRBP-238ENST00000592412 TMEM102Q8N9M5 508 aaPredicted RBP17.76■□□□□ 0.43
CIRBP-238ENST00000592412 OR4E2Q8NGC2 313 aa17.76■□□□□ 0.43
CIRBP-238ENST00000592412 ZNF398Q8TD17 642 aa17.76■□□□□ 0.43
CIRBP-238ENST00000592412 IQCDQ96DY2 449 aa17.76■□□□□ 0.43
CIRBP-238ENST00000592412 CLIP3Q96DZ5 547 aa17.76■□□□□ 0.43
CIRBP-238ENST00000592412 LINC00615Q96LM1 132 aaPredicted RBP17.76■□□□□ 0.43
CIRBP-238ENST00000592412 FCRL5Q96RD9 977 aa17.76■□□□□ 0.43
CIRBP-238ENST00000592412 GORASP1Q9BQQ3 440 aa17.76■□□□□ 0.43
CIRBP-238ENST00000592412 ACTR5Q9H9F9 607 aaPredicted RBP17.76■□□□□ 0.43
CIRBP-238ENST00000592412 C1GALT1Q9NS00 363 aa17.76■□□□□ 0.43
CIRBP-238ENST00000592412 HYOU1Q9Y4L1 999 aa17.76■□□□□ 0.43
CIRBP-238ENST00000592412 APCP25054 2843 aa17.76■□□□□ 0.43
CIRBP-238ENST00000592412 BTN3A3O00478 584 aa17.75■□□□□ 0.43
CIRBP-238ENST00000592412 KLF7O75840 302 aaPredicted RBP17.75■□□□□ 0.43
CIRBP-238ENST00000592412 CBX6O95503 412 aa17.75■□□□□ 0.43
CIRBP-238ENST00000592412 PRAMEF1O95521 474 aa17.75■□□□□ 0.43
CIRBP-238ENST00000592412 MSH3P20585 1137 aa17.75■□□□□ 0.43
CIRBP-238ENST00000592412 CDH3P22223 829 aa17.75■□□□□ 0.43
CIRBP-238ENST00000592412 AKT1P31749 480 aa17.75■□□□□ 0.43
CIRBP-238ENST00000592412 LMAN1P49257 510 aa17.75■□□□□ 0.43
CIRBP-238ENST00000592412 NCF4Q15080 339 aa17.75■□□□□ 0.43
CIRBP-238ENST00000592412 LLGL1Q15334 1064 aa17.75■□□□□ 0.43
CIRBP-238ENST00000592412 NR6A1Q15406 480 aa17.75■□□□□ 0.43
CIRBP-238ENST00000592412 BCL7AQ4VC05 210 aa17.75■□□□□ 0.43
CIRBP-238ENST00000592412 ARMC6Q6NXE6 501 aa17.75■□□□□ 0.43
CIRBP-238ENST00000592412 IPMKQ8NFU5 416 aa17.75■□□□□ 0.43
CIRBP-238ENST00000592412 TFB1MQ8WVM0 346 aaKnown RBP17.75■□□□□ 0.43
CIRBP-238ENST00000592412 RANBP9Q96S59 729 aa17.75■□□□□ 0.43
CIRBP-238ENST00000592412 PITPNM3Q9BZ71 974 aa17.75■□□□□ 0.43
CIRBP-238ENST00000592412 SLC29A3Q9BZD2 475 aa17.75■□□□□ 0.43
CIRBP-238ENST00000592412 ASF1BQ9NVP2 202 aa17.75■□□□□ 0.43
CIRBP-238ENST00000592412 PKP3Q9Y446 797 aa17.75■□□□□ 0.43
CIRBP-238ENST00000592412 ARL5AQ9Y689 179 aa17.75■□□□□ 0.43
CIRBP-238ENST00000592412 POLBP06746 335 aa17.74■□□□□ 0.43
CIRBP-238ENST00000592412 SLC35G4P0C7Q5 338 aa17.74■□□□□ 0.43
CIRBP-238ENST00000592412 PRDX3P30048 256 aaKnown RBP17.74■□□□□ 0.43
CIRBP-238ENST00000592412 ARHGAP25P42331 645 aa17.74■□□□□ 0.43
CIRBP-238ENST00000592412 NR2C2P49116 596 aa17.74■□□□□ 0.43
CIRBP-238ENST00000592412 XIAPP98170 497 aa17.74■□□□□ 0.43
CIRBP-238ENST00000592412 ZNF658BQ4V348 819 aaPredicted RBP17.74■□□□□ 0.43
CIRBP-238ENST00000592412 CAVIN1Q6NZI2 390 aaKnown RBP17.74■□□□□ 0.43
CIRBP-238ENST00000592412 INPP5DQ92835 1189 aa17.74■□□□□ 0.43
CIRBP-238ENST00000592412 FANCEQ9HB96 536 aa17.74■□□□□ 0.43
CIRBP-238ENST00000592412 MAP10Q9P2G4 905 aa17.74■□□□□ 0.43
CIRBP-238ENST00000592412 ANKRD17O75179 2603 aaKnown RBP17.74■□□□□ 0.43
CIRBP-238ENST00000592412 PIKFYVEQ9Y2I7 2098 aa17.73■□□□□ 0.43
CIRBP-238ENST00000592412 POLEQ07864 2286 aa17.73■□□□□ 0.43
CIRBP-238ENST00000592412 AGAP14A8MT82 685 aa17.73■□□□□ 0.43
CIRBP-238ENST00000592412 H3BMH7 237 aa17.73■□□□□ 0.43
CIRBP-238ENST00000592412 BTN3A1O00481 513 aa17.73■□□□□ 0.43
CIRBP-238ENST00000592412 CST8O60676 142 aa17.73■□□□□ 0.43
CIRBP-238ENST00000592412 PVRP15151 417 aa17.73■□□□□ 0.43
CIRBP-238ENST00000592412 CYP2A7P20853 494 aa17.73■□□□□ 0.43
CIRBP-238ENST00000592412 PREPP48147 710 aa17.73■□□□□ 0.43
CIRBP-238ENST00000592412 RRADP55042 308 aa17.73■□□□□ 0.43
CIRBP-238ENST00000592412 OLIG2Q13516 323 aa17.73■□□□□ 0.43
CIRBP-238ENST00000592412 CRB2Q5IJ48 1285 aa17.73■□□□□ 0.43
CIRBP-238ENST00000592412 SPOCD1Q6ZMY3 1216 aa17.73■□□□□ 0.43
CIRBP-238ENST00000592412 CDHR3Q6ZTQ4 885 aa17.73■□□□□ 0.43
CIRBP-238ENST00000592412 MICALCLQ6ZW33 695 aa17.73■□□□□ 0.43
CIRBP-238ENST00000592412 MRGPREQ86SM8 312 aa17.73■□□□□ 0.43
CIRBP-238ENST00000592412 TMEM151BQ8IW70 566 aa17.73■□□□□ 0.43
CIRBP-238ENST00000592412 CFAP206Q8IYR0 622 aa17.73■□□□□ 0.43
CIRBP-238ENST00000592412 ACVR1CQ8NER5 493 aa17.73■□□□□ 0.43
CIRBP-238ENST00000592412 TRAPPC9Q96Q05 1148 aa17.73■□□□□ 0.43
CIRBP-238ENST00000592412 KLHL25Q9H0H3 589 aa17.73■□□□□ 0.43
CIRBP-238ENST00000592412 SYTL2Q9HCH5 934 aa17.73■□□□□ 0.43
CIRBP-238ENST00000592412 KLHL8Q9P2G9 620 aaPredicted RBP17.73■□□□□ 0.43
CIRBP-238ENST00000592412 FKBPLQ9UIM3 349 aa17.73■□□□□ 0.43
CIRBP-238ENST00000592412 GSAPA4D1B5 854 aa17.72■□□□□ 0.43
CIRBP-238ENST00000592412 KLHL33A6NCF5 533 aa17.72■□□□□ 0.43
CIRBP-238ENST00000592412 MASP2O00187 686 aa17.72■□□□□ 0.43
CIRBP-238ENST00000592412 STX7O15400 261 aaKnown RBP17.72■□□□□ 0.43
CIRBP-238ENST00000592412 ZNF749O43361 778 aa17.72■□□□□ 0.43
CIRBP-238ENST00000592412 HCRTR1O43613 425 aa17.72■□□□□ 0.43
CIRBP-238ENST00000592412 SRP72O76094 671 aaKnown RBP17.72■□□□□ 0.43
CIRBP-238ENST00000592412 AGTP01019 485 aa17.72■□□□□ 0.43
CIRBP-238ENST00000592412 TNNT1P13805 278 aa17.72■□□□□ 0.43
CIRBP-238ENST00000592412 VARSP26640 1264 aaKnown RBP17.72■□□□□ 0.43
CIRBP-238ENST00000592412 NDUFS1P28331 727 aa17.72■□□□□ 0.43
CIRBP-238ENST00000592412 PRLHRP49683 370 aa17.72■□□□□ 0.43
CIRBP-238ENST00000592412 PRKAA1Q13131 559 aa17.72■□□□□ 0.43
CIRBP-238ENST00000592412 MPP3Q13368 585 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms