RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 ZNF501Q96CX3 271 aaPredicted RBP18.38■□□□□ 0.53
CCDC43-205ENST00000592333 FANCEQ9HB96 536 aa18.38■□□□□ 0.53
CCDC43-205ENST00000592333 FLNCQ14315 2725 aa18.37■□□□□ 0.53
CCDC43-205ENST00000592333 MAP3K7O43318 606 aa18.37■□□□□ 0.53
CCDC43-205ENST00000592333 TIAF1O95411 115 aa18.37■□□□□ 0.53
CCDC43-205ENST00000592333 KLK3P07288 261 aaPredicted RBP18.37■□□□□ 0.53
CCDC43-205ENST00000592333 FURINP09958 794 aa18.37■□□□□ 0.53
CCDC43-205ENST00000592333 PBLDP30039 288 aaPredicted RBP18.37■□□□□ 0.53
CCDC43-205ENST00000592333 SEMA5AQ13591 1074 aa18.37■□□□□ 0.53
CCDC43-205ENST00000592333 KRT33BQ14525 404 aa18.37■□□□□ 0.53
CCDC43-205ENST00000592333 DENND5AQ6IQ26 1287 aa18.37■□□□□ 0.53
CCDC43-205ENST00000592333 DET1Q7L5Y6 550 aa18.37■□□□□ 0.53
CCDC43-205ENST00000592333 CFAP206Q8IYR0 622 aa18.37■□□□□ 0.53
CCDC43-205ENST00000592333 TBL1YQ9BQ87 522 aa18.37■□□□□ 0.53
CCDC43-205ENST00000592333 ACTL8Q9H568 366 aa18.37■□□□□ 0.53
CCDC43-205ENST00000592333 TFB2MQ9H5Q4 396 aaKnown RBP18.37■□□□□ 0.53
CCDC43-205ENST00000592333 POMT2Q9UKY4 750 aa18.37■□□□□ 0.53
CCDC43-205ENST00000592333 MAN2B2Q9Y2E5 1009 aa18.37■□□□□ 0.53
CCDC43-205ENST00000592333 CFAP20Q9Y6A4 193 aaKnown RBP18.37■□□□□ 0.53
CCDC43-205ENST00000592333 MAST4O15021 2626 aa18.36■□□□□ 0.53
CCDC43-205ENST00000592333 TRBV5-4A0A0C4DH59 114 aa18.36■□□□□ 0.53
CCDC43-205ENST00000592333 CDC14CA4D256 554 aa18.36■□□□□ 0.53
CCDC43-205ENST00000592333 OR6C74A6NCV1 312 aa18.36■□□□□ 0.53
CCDC43-205ENST00000592333 GOLGA6L9A6NEM1 432 aa18.36■□□□□ 0.53
CCDC43-205ENST00000592333 LDB2O43679 373 aa18.36■□□□□ 0.53
CCDC43-205ENST00000592333 SCRG1O75711 98 aa18.36■□□□□ 0.53
CCDC43-205ENST00000592333 RAB40ALP0C0E4 278 aa18.36■□□□□ 0.53
CCDC43-205ENST00000592333 KCNAB1Q14722 419 aa18.36■□□□□ 0.53
CCDC43-205ENST00000592333 PARP6Q2NL67 630 aa18.36■□□□□ 0.53
CCDC43-205ENST00000592333 TMEM126BQ8IUX1 230 aa18.36■□□□□ 0.53
CCDC43-205ENST00000592333 TEX19Q8NA77 164 aa18.36■□□□□ 0.53
CCDC43-205ENST00000592333 SPDYE1Q8NFV5 336 aaPredicted RBP18.36■□□□□ 0.53
CCDC43-205ENST00000592333 CPT1BQ92523 772 aa18.36■□□□□ 0.53
CCDC43-205ENST00000592333 MRFAP1L1Q96HT8 127 aa18.36■□□□□ 0.53
CCDC43-205ENST00000592333 RMDN2Q96LZ7 410 aa18.36■□□□□ 0.53
CCDC43-205ENST00000592333 MVB12BQ9H7P6 319 aa18.36■□□□□ 0.53
CCDC43-205ENST00000592333 ZDHHC3Q9NYG2 299 aa18.36■□□□□ 0.53
CCDC43-205ENST00000592333 FARSAQ9Y285 508 aaKnown RBP18.36■□□□□ 0.53
CCDC43-205ENST00000592333 TP53TG5Q9Y2B4 290 aa18.36■□□□□ 0.53
CCDC43-205ENST00000592333 PTPN13Q12923 2485 aa18.35■□□□□ 0.53
CCDC43-205ENST00000592333 QSOX1O00391 747 aa18.35■□□□□ 0.53
CCDC43-205ENST00000592333 IFRD1O00458 451 aaPredicted RBP18.35■□□□□ 0.53
CCDC43-205ENST00000592333 PSMD3O43242 534 aa18.35■□□□□ 0.53
CCDC43-205ENST00000592333 AP2A2O94973 939 aa18.35■□□□□ 0.53
CCDC43-205ENST00000592333 NTRK1P04629 796 aa18.35■□□□□ 0.53
CCDC43-205ENST00000592333 PSMA3P25788 255 aa18.35■□□□□ 0.53
CCDC43-205ENST00000592333 CD97P48960 835 aa18.35■□□□□ 0.53
CCDC43-205ENST00000592333 KPNA2P52292 529 aaKnown RBP18.35■□□□□ 0.53
CCDC43-205ENST00000592333 NAP1L1P55209 391 aaKnown RBP18.35■□□□□ 0.53
CCDC43-205ENST00000592333 LAMB3Q13751 1172 aa18.35■□□□□ 0.53
CCDC43-205ENST00000592333 P3H1Q32P28 736 aa18.35■□□□□ 0.53
CCDC43-205ENST00000592333 ZNF658BQ4V348 819 aaPredicted RBP18.35■□□□□ 0.53
CCDC43-205ENST00000592333 COLEC12Q5KU26 742 aa18.35■□□□□ 0.53
CCDC43-205ENST00000592333 KCTD11Q693B1 232 aa18.35■□□□□ 0.53
CCDC43-205ENST00000592333 ASB18Q6ZVZ8 466 aa18.35■□□□□ 0.53
CCDC43-205ENST00000592333 TXLNBQ8N3L3 684 aa18.35■□□□□ 0.53
CCDC43-205ENST00000592333 OR13C4Q8NGS5 318 aa18.35■□□□□ 0.53
CCDC43-205ENST00000592333 CCDC110Q8TBZ0 833 aa18.35■□□□□ 0.53
CCDC43-205ENST00000592333 UBE2Q2Q8WVN8 375 aa18.35■□□□□ 0.53
CCDC43-205ENST00000592333 APOL2Q9BQE5 337 aa18.35■□□□□ 0.53
CCDC43-205ENST00000592333 OR52A5Q9H2C5 316 aa18.35■□□□□ 0.53
CCDC43-205ENST00000592333 SRMSQ9H3Y6 488 aa18.35■□□□□ 0.53
CCDC43-205ENST00000592333 C10orf88Q9H8K7 445 aa18.35■□□□□ 0.53
CCDC43-205ENST00000592333 COG4Q9H9E3 785 aa18.35■□□□□ 0.53
CCDC43-205ENST00000592333 TLK1Q9UKI8 766 aa18.35■□□□□ 0.53
CCDC43-205ENST00000592333 TFR2Q9UP52 801 aa18.35■□□□□ 0.53
CCDC43-205ENST00000592333 PCDHGB7Q9Y5F8 929 aa18.35■□□□□ 0.53
CCDC43-205ENST00000592333 PCDHGA9Q9Y5G4 932 aaKnown RBP18.35■□□□□ 0.53
CCDC43-205ENST00000592333 MACROD2A1Z1Q3 448 aa18.34■□□□□ 0.53
CCDC43-205ENST00000592333 CLEC18AA5D8T8 446 aa18.34■□□□□ 0.53
CCDC43-205ENST00000592333 MIF4GDA9UHW6 222 aaKnown RBP18.34■□□□□ 0.53
CCDC43-205ENST00000592333 POLBP06746 335 aa18.34■□□□□ 0.53
CCDC43-205ENST00000592333 CDH3P22223 829 aa18.34■□□□□ 0.53
CCDC43-205ENST00000592333 ACRV1P26436 265 aa18.34■□□□□ 0.53
CCDC43-205ENST00000592333 UBAP2LQ14157 1087 aaKnown RBP18.34■□□□□ 0.53
CCDC43-205ENST00000592333 CLEC18BQ6UXF7 455 aa18.34■□□□□ 0.53
CCDC43-205ENST00000592333 SYCE1Q8N0S2 351 aa18.34■□□□□ 0.53
CCDC43-205ENST00000592333 UBL4BQ8N7F7 174 aa18.34■□□□□ 0.53
CCDC43-205ENST00000592333 LRRC57Q8N9N7 239 aa18.34■□□□□ 0.53
CCDC43-205ENST00000592333 CLEC18CQ8NCF0 446 aa18.34■□□□□ 0.53
CCDC43-205ENST00000592333 OR4E2Q8NGC2 313 aa18.34■□□□□ 0.53
CCDC43-205ENST00000592333 LCN9Q8WX39 176 aa18.34■□□□□ 0.53
CCDC43-205ENST00000592333 DPH2Q9BQC3 489 aaPredicted RBP18.34■□□□□ 0.53
CCDC43-205ENST00000592333 PITPNM3Q9BZ71 974 aa18.34■□□□□ 0.53
CCDC43-205ENST00000592333 LRRC40Q9H9A6 602 aa18.34■□□□□ 0.53
CCDC43-205ENST00000592333 NLE1Q9NVX2 485 aaPredicted RBP18.34■□□□□ 0.53
CCDC43-205ENST00000592333 RCCD1A6NED2 376 aa18.33■□□□□ 0.52
CCDC43-205ENST00000592333 POLR2CP19387 275 aaPredicted RBP18.33■□□□□ 0.52
CCDC43-205ENST00000592333 PRDX3P30048 256 aaKnown RBP18.33■□□□□ 0.52
CCDC43-205ENST00000592333 MC4RP32245 332 aa18.33■□□□□ 0.52
CCDC43-205ENST00000592333 PLOD1Q02809 727 aaPredicted RBP18.33■□□□□ 0.52
CCDC43-205ENST00000592333 CACNG1Q06432 222 aa18.33■□□□□ 0.52
CCDC43-205ENST00000592333 PAPD7Q5XG87 772 aaKnown RBP18.33■□□□□ 0.52
CCDC43-205ENST00000592333 DUS1LQ6P1R4 473 aaKnown RBP18.33■□□□□ 0.52
CCDC43-205ENST00000592333 CERS6Q6ZMG9 384 aa18.33■□□□□ 0.52
CCDC43-205ENST00000592333 ARHGEF18Q6ZSZ5 1173 aa18.33■□□□□ 0.52
CCDC43-205ENST00000592333 ATCAYQ86WG3 371 aa18.33■□□□□ 0.52
CCDC43-205ENST00000592333 HPS6Q86YV9 775 aa18.33■□□□□ 0.52
CCDC43-205ENST00000592333 STYXQ8WUJ0 223 aa18.33■□□□□ 0.52
CCDC43-205ENST00000592333 ALG3Q92685 438 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms