RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 KCNJ13O60928 360 aa16.86■□□□□ 0.29
RETREG3-210ENST00000590541 ZRANB2O95218 330 aaKnown RBP eCLIP16.86■□□□□ 0.29
RETREG3-210ENST00000590541 ZNF75DP51815 510 aa16.86■□□□□ 0.29
RETREG3-210ENST00000590541 KPNA2P52292 529 aaKnown RBP16.86■□□□□ 0.29
RETREG3-210ENST00000590541 ZBTB17Q13105 803 aa16.86■□□□□ 0.29
RETREG3-210ENST00000590541 NCF4Q15080 339 aa16.86■□□□□ 0.29
RETREG3-210ENST00000590541 TEX44Q53QW1 395 aa16.86■□□□□ 0.29
RETREG3-210ENST00000590541 TFDP3Q5H9I0 405 aa16.86■□□□□ 0.29
RETREG3-210ENST00000590541 MFSD7Q6UXD7 560 aa16.86■□□□□ 0.29
RETREG3-210ENST00000590541 AMZ2Q86W34 360 aa16.86■□□□□ 0.29
RETREG3-210ENST00000590541 OOSP2Q86WS3 158 aa16.86■□□□□ 0.29
RETREG3-210ENST00000590541 KATNAL2Q8IYT4 538 aa16.86■□□□□ 0.29
RETREG3-210ENST00000590541 ST6GALNAC3Q8NDV1 305 aa16.86■□□□□ 0.29
RETREG3-210ENST00000590541 IMP4Q96G21 291 aaKnown RBP16.86■□□□□ 0.29
RETREG3-210ENST00000590541 RBM41Q96IZ5 413 aaKnown RBP16.86■□□□□ 0.29
RETREG3-210ENST00000590541 GPR63Q9BZJ6 419 aa16.86■□□□□ 0.29
RETREG3-210ENST00000590541 ILKAPQ9H0C8 392 aaPredicted RBP16.86■□□□□ 0.29
RETREG3-210ENST00000590541 SLC25A51Q9H1U9 297 aa16.86■□□□□ 0.29
RETREG3-210ENST00000590541 ZNF552Q9H707 407 aaPredicted RBP16.86■□□□□ 0.29
RETREG3-210ENST00000590541 SOHLH2Q9NX45 425 aa16.86■□□□□ 0.29
RETREG3-210ENST00000590541 PCDHGA10Q9Y5H3 936 aa16.86■□□□□ 0.29
RETREG3-210ENST00000590541 CFAP20Q9Y6A4 193 aaKnown RBP16.86■□□□□ 0.29
RETREG3-210ENST00000590541 APCP25054 2843 aa16.86■□□□□ 0.29
RETREG3-210ENST00000590541 POLEQ07864 2286 aa16.85■□□□□ 0.29
RETREG3-210ENST00000590541 AURKAO14965 403 aa16.85■□□□□ 0.29
RETREG3-210ENST00000590541 LRRTM2O43300 516 aa16.85■□□□□ 0.29
RETREG3-210ENST00000590541 POP7O75817 140 aaKnown RBP16.85■□□□□ 0.29
RETREG3-210ENST00000590541 MTHFD1P11586 935 aaKnown RBP16.85■□□□□ 0.29
RETREG3-210ENST00000590541 TNNT1P13805 278 aa16.85■□□□□ 0.29
RETREG3-210ENST00000590541 GLRBP48167 497 aa16.85■□□□□ 0.29
RETREG3-210ENST00000590541 CTSCP53634 463 aa16.85■□□□□ 0.29
RETREG3-210ENST00000590541 GTF2H3Q13889 308 aa16.85■□□□□ 0.29
RETREG3-210ENST00000590541 NFE2L1Q14494 772 aa16.85■□□□□ 0.29
RETREG3-210ENST00000590541 NAA30Q147X3 362 aaPredicted RBP16.85■□□□□ 0.29
RETREG3-210ENST00000590541 MYBPC3Q14896 1274 aa16.85■□□□□ 0.29
RETREG3-210ENST00000590541 ZRSR2Q15696 482 aaKnown RBP16.85■□□□□ 0.29
RETREG3-210ENST00000590541 PTCHD3Q3KNS1 767 aa16.85■□□□□ 0.29
RETREG3-210ENST00000590541 LYPLAL1Q5VWZ2 237 aa16.85■□□□□ 0.29
RETREG3-210ENST00000590541 SP5Q6BEB4 398 aaPredicted RBP16.85■□□□□ 0.29
RETREG3-210ENST00000590541 CCDC70Q6NSX1 233 aa16.85■□□□□ 0.29
RETREG3-210ENST00000590541 SPOCD1Q6ZMY3 1216 aa16.85■□□□□ 0.29
RETREG3-210ENST00000590541 Q6ZS92 163 aa16.85■□□□□ 0.29
RETREG3-210ENST00000590541 CUZD1Q86UP6 607 aa16.85■□□□□ 0.29
RETREG3-210ENST00000590541 RAB43Q86YS6 212 aa16.85■□□□□ 0.29
RETREG3-210ENST00000590541 CARFQ8N187 725 aa16.85■□□□□ 0.29
RETREG3-210ENST00000590541 OR1L3Q8NH93 324 aa16.85■□□□□ 0.29
RETREG3-210ENST00000590541 TFB1MQ8WVM0 346 aaKnown RBP16.85■□□□□ 0.29
RETREG3-210ENST00000590541 VAT1Q99536 393 aa16.85■□□□□ 0.29
RETREG3-210ENST00000590541 ACTR5Q9H9F9 607 aaPredicted RBP16.85■□□□□ 0.29
RETREG3-210ENST00000590541 IMP3Q9NV31 184 aaKnown RBP16.85■□□□□ 0.29
RETREG3-210ENST00000590541 EPN1Q9Y6I3 576 aaPredicted RBP16.85■□□□□ 0.29
RETREG3-210ENST00000590541 PIKFYVEQ9Y2I7 2098 aa16.84■□□□□ 0.29
RETREG3-210ENST00000590541 OR6C74A6NCV1 312 aa16.84■□□□□ 0.29
RETREG3-210ENST00000590541 CST8O60676 142 aa16.84■□□□□ 0.29
RETREG3-210ENST00000590541 KLF7O75840 302 aaPredicted RBP16.84■□□□□ 0.29
RETREG3-210ENST00000590541 OTX2P32243 289 aa16.84■□□□□ 0.29
RETREG3-210ENST00000590541 ARCN1P48444 511 aaKnown RBP16.84■□□□□ 0.29
RETREG3-210ENST00000590541 COPS2P61201 443 aa16.84■□□□□ 0.29
RETREG3-210ENST00000590541 DYNLT1P63172 113 aa16.84■□□□□ 0.29
RETREG3-210ENST00000590541 PRKD1Q15139 912 aaPredicted RBP16.84■□□□□ 0.29
RETREG3-210ENST00000590541 ZNF385CQ66K41 422 aaPredicted RBP16.84■□□□□ 0.29
RETREG3-210ENST00000590541 DUS1LQ6P1R4 473 aaKnown RBP16.84■□□□□ 0.29
RETREG3-210ENST00000590541 NPNTQ6UXI9 565 aa16.84■□□□□ 0.29
RETREG3-210ENST00000590541 MRGPREQ86SM8 312 aa16.84■□□□□ 0.29
RETREG3-210ENST00000590541 GALNT16Q8N428 558 aa16.84■□□□□ 0.29
RETREG3-210ENST00000590541 RASGEF1AQ8N9B8 481 aa16.84■□□□□ 0.29
RETREG3-210ENST00000590541 GDAP1Q8TB36 358 aa16.84■□□□□ 0.29
RETREG3-210ENST00000590541 BRSK1Q8TDC3 778 aa16.84■□□□□ 0.29
RETREG3-210ENST00000590541 P3H4Q92791 437 aa16.84■□□□□ 0.29
RETREG3-210ENST00000590541 TADA1Q96BN2 335 aa16.84■□□□□ 0.29
RETREG3-210ENST00000590541 TEKT5Q96M29 485 aa16.84■□□□□ 0.29
RETREG3-210ENST00000590541 AGAP3Q96P47 875 aa16.84■□□□□ 0.29
RETREG3-210ENST00000590541 INSM2Q96T92 566 aaPredicted RBP16.84■□□□□ 0.29
RETREG3-210ENST00000590541 ZBTB20Q9HC78 741 aaPredicted RBP16.84■□□□□ 0.29
RETREG3-210ENST00000590541 BPIFA1Q9NP55 256 aa16.84■□□□□ 0.29
RETREG3-210ENST00000590541 HYOU1Q9Y4L1 999 aa16.84■□□□□ 0.29
RETREG3-210ENST00000590541 SPO11Q9Y5K1 396 aa16.84■□□□□ 0.29
RETREG3-210ENST00000590541 CSMD2Q7Z408 3487 aa16.84■□□□□ 0.29
RETREG3-210ENST00000590541 SPTBP11277 2137 aa16.84■□□□□ 0.29
RETREG3-210ENST00000590541 SLC9B1P1A6NJY1 282 aa16.83■□□□□ 0.28
RETREG3-210ENST00000590541 BTNL10A8MVZ5 291 aa16.83■□□□□ 0.28
RETREG3-210ENST00000590541 HACD1B0YJ81 288 aa16.83■□□□□ 0.28
RETREG3-210ENST00000590541 TMEM150CB9EJG8 249 aa16.83■□□□□ 0.28
RETREG3-210ENST00000590541 PDZD2O15018 2839 aa16.83■□□□□ 0.28
RETREG3-210ENST00000590541 ALPPP05187 535 aa16.83■□□□□ 0.28
RETREG3-210ENST00000590541 XRCC4Q13426 336 aa16.83■□□□□ 0.28
RETREG3-210ENST00000590541 LLGL1Q15334 1064 aa16.83■□□□□ 0.28
RETREG3-210ENST00000590541 PPP2R5EQ16537 467 aa16.83■□□□□ 0.28
RETREG3-210ENST00000590541 DCAF10Q5QP82 559 aa16.83■□□□□ 0.28
RETREG3-210ENST00000590541 DAAM2Q86T65 1068 aa16.83■□□□□ 0.28
RETREG3-210ENST00000590541 KCNMB4Q86W47 210 aa16.83■□□□□ 0.28
RETREG3-210ENST00000590541 MCEMP1Q8IX19 187 aa16.83■□□□□ 0.28
RETREG3-210ENST00000590541 TTC25Q96NG3 672 aa16.83■□□□□ 0.28
RETREG3-210ENST00000590541 RBSNQ9H1K0 784 aa16.83■□□□□ 0.28
RETREG3-210ENST00000590541 FANCEQ9HB96 536 aa16.83■□□□□ 0.28
RETREG3-210ENST00000590541 GLOD4Q9HC38 313 aa16.83■□□□□ 0.28
RETREG3-210ENST00000590541 SLC24A2Q9UI40 661 aa16.83■□□□□ 0.28
RETREG3-210ENST00000590541 EFR3BQ9Y2G0 817 aa16.83■□□□□ 0.28
RETREG3-210ENST00000590541 MASP2O00187 686 aa16.82■□□□□ 0.28
RETREG3-210ENST00000590541 E2F3O00716 465 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms