RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 MS4A14Q96JA4 679 aa10.98□□□□□ -0.65
SMAD4-211ENST00000590499 CCDC74BQ96LY2 380 aa10.98□□□□□ -0.65
SMAD4-211ENST00000590499 COPS8Q99627 209 aa10.98□□□□□ -0.65
SMAD4-211ENST00000590499 TBC1D10AQ9BXI6 508 aa10.98□□□□□ -0.65
SMAD4-211ENST00000590499 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.98□□□□□ -0.65
SMAD4-211ENST00000590499 EPB41L1Q9H4G0 881 aa10.98□□□□□ -0.65
SMAD4-211ENST00000590499 STN1Q9H668 368 aaKnown RBP10.98□□□□□ -0.65
SMAD4-211ENST00000590499 POT1Q9NUX5 634 aa10.98□□□□□ -0.65
SMAD4-211ENST00000590499 OGFRQ9NZT2 677 aa10.98□□□□□ -0.65
SMAD4-211ENST00000590499 ZNF232Q9UNY5 417 aa10.98□□□□□ -0.65
SMAD4-211ENST00000590499 PCDHGA7Q9Y5G6 932 aa10.98□□□□□ -0.65
SMAD4-211ENST00000590499 SLC30A1Q9Y6M5 507 aa10.98□□□□□ -0.65
SMAD4-211ENST00000590499 SDK2Q58EX2 2172 aa10.98□□□□□ -0.65
SMAD4-211ENST00000590499 CACNA1GO43497 2377 aa10.97□□□□□ -0.65
SMAD4-211ENST00000590499 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.97□□□□□ -0.65
SMAD4-211ENST00000590499 PRAMEF33A0A0G2JMD5 474 aa10.97□□□□□ -0.65
SMAD4-211ENST00000590499 CCDC78A2IDD5 438 aa10.97□□□□□ -0.65
SMAD4-211ENST00000590499 HEATR9A2RTY3 570 aa10.97□□□□□ -0.65
SMAD4-211ENST00000590499 CCDC162PA2VCL2 907 aa10.97□□□□□ -0.65
SMAD4-211ENST00000590499 KLHL33A6NCF5 533 aa10.97□□□□□ -0.65
SMAD4-211ENST00000590499 USP27XA6NNY8 438 aa10.97□□□□□ -0.65
SMAD4-211ENST00000590499 E7EVH7 732 aa10.97□□□□□ -0.65
SMAD4-211ENST00000590499 DUX1O43812 170 aa10.97□□□□□ -0.65
SMAD4-211ENST00000590499 VIPP01282 170 aa10.97□□□□□ -0.65
SMAD4-211ENST00000590499 ARAFP10398 606 aa10.97□□□□□ -0.65
SMAD4-211ENST00000590499 ATP1B2P14415 290 aaPredicted RBP10.97□□□□□ -0.65
SMAD4-211ENST00000590499 ITIH1P19827 911 aa10.97□□□□□ -0.65
SMAD4-211ENST00000590499 CD33P20138 364 aa10.97□□□□□ -0.65
SMAD4-211ENST00000590499 ADRA1DP25100 572 aa10.97□□□□□ -0.65
SMAD4-211ENST00000590499 MSNP26038 577 aaKnown RBP10.97□□□□□ -0.65
SMAD4-211ENST00000590499 ITPKBP27987 946 aa10.97□□□□□ -0.65
SMAD4-211ENST00000590499 FOXN2P32314 431 aa10.97□□□□□ -0.65
SMAD4-211ENST00000590499 ETV5P41161 510 aa10.97□□□□□ -0.65
SMAD4-211ENST00000590499 MAGEA6P43360 314 aa10.97□□□□□ -0.65
SMAD4-211ENST00000590499 LMAN1P49257 510 aa10.97□□□□□ -0.65
SMAD4-211ENST00000590499 CACNG1Q06432 222 aa10.97□□□□□ -0.65
SMAD4-211ENST00000590499 DOC2BQ14184 412 aa10.97□□□□□ -0.65
SMAD4-211ENST00000590499 KCTD19Q17RG1 926 aaPredicted RBP10.97□□□□□ -0.65
SMAD4-211ENST00000590499 SKIDA1Q1XH10 827 aa10.97□□□□□ -0.65
SMAD4-211ENST00000590499 TSTD2Q5T7W7 516 aa10.97□□□□□ -0.65
SMAD4-211ENST00000590499 PPP1R21Q6ZMI0 780 aa10.97□□□□□ -0.65
SMAD4-211ENST00000590499 ZNF534Q76KX8 674 aa10.97□□□□□ -0.65
SMAD4-211ENST00000590499 RCBTB1Q8NDN9 531 aa10.97□□□□□ -0.65
SMAD4-211ENST00000590499 ZNF248Q8NDW4 579 aa10.97□□□□□ -0.65
SMAD4-211ENST00000590499 GPR150Q8NGU9 434 aa10.97□□□□□ -0.65
SMAD4-211ENST00000590499 ACTRT1Q8TDG2 376 aa10.97□□□□□ -0.65
SMAD4-211ENST00000590499 PEX13Q92968 403 aa10.97□□□□□ -0.65
SMAD4-211ENST00000590499 ZNF778Q96MU6 729 aa10.97□□□□□ -0.65
SMAD4-211ENST00000590499 OSBPL9Q96SU4 736 aa10.97□□□□□ -0.65
SMAD4-211ENST00000590499 CMKLR1Q99788 373 aa10.97□□□□□ -0.65
SMAD4-211ENST00000590499 SLC40A1Q9NP59 571 aa10.97□□□□□ -0.65
SMAD4-211ENST00000590499 TRMT1Q9NXH9 659 aaKnown RBP10.97□□□□□ -0.65
SMAD4-211ENST00000590499 SMARCAL1Q9NZC9 954 aa10.97□□□□□ -0.65
SMAD4-211ENST00000590499 PISDQ9UG56 409 aa10.97□□□□□ -0.65
SMAD4-211ENST00000590499 SLC2A6Q9UGQ3 507 aa10.97□□□□□ -0.65
SMAD4-211ENST00000590499 ACSL6Q9UKU0 697 aa10.97□□□□□ -0.65
SMAD4-211ENST00000590499 SNX12Q9UMY4 172 aa10.97□□□□□ -0.65
SMAD4-211ENST00000590499 NEU2Q9Y3R4 380 aa10.97□□□□□ -0.65
SMAD4-211ENST00000590499 TCAF1Q9Y4C2 921 aa10.97□□□□□ -0.65
SMAD4-211ENST00000590499 MN1Q10571 1320 aaPredicted RBP10.97□□□□□ -0.65
SMAD4-211ENST00000590499 TCRBV7S3A2A0A539 114 aa10.96□□□□□ -0.65
SMAD4-211ENST00000590499 OR51F1A6NGY5 319 aa10.96□□□□□ -0.65
SMAD4-211ENST00000590499 PGRMC1O00264 195 aaKnown RBP10.96□□□□□ -0.65
SMAD4-211ENST00000590499 CES2O00748 559 aa10.96□□□□□ -0.65
SMAD4-211ENST00000590499 NVLO15381 856 aaKnown RBP10.96□□□□□ -0.65
SMAD4-211ENST00000590499 RRP8O43159 456 aaKnown RBP10.96□□□□□ -0.65
SMAD4-211ENST00000590499 KIF5CO60282 957 aa10.96□□□□□ -0.65
SMAD4-211ENST00000590499 FAM157BP0CG42 384 aa10.96□□□□□ -0.65
SMAD4-211ENST00000590499 RALBP11234 206 aa10.96□□□□□ -0.65
SMAD4-211ENST00000590499 CCL4P13236 92 aa10.96□□□□□ -0.65
SMAD4-211ENST00000590499 TPSB2P20231 275 aa10.96□□□□□ -0.65
SMAD4-211ENST00000590499 MPSTP25325 297 aa10.96□□□□□ -0.65
SMAD4-211ENST00000590499 PBLDP30039 288 aaPredicted RBP10.96□□□□□ -0.65
SMAD4-211ENST00000590499 SLC5A2P31639 672 aa10.96□□□□□ -0.65
SMAD4-211ENST00000590499 BASP1P80723 227 aaKnown RBP10.96□□□□□ -0.65
SMAD4-211ENST00000590499 TLE3Q04726 772 aa10.96□□□□□ -0.65
SMAD4-211ENST00000590499 LAMB3Q13751 1172 aa10.96□□□□□ -0.65
SMAD4-211ENST00000590499 GPR18Q14330 331 aa10.96□□□□□ -0.65
SMAD4-211ENST00000590499 ITIH4Q14624 930 aa10.96□□□□□ -0.65
SMAD4-211ENST00000590499 KCNJ11Q14654 390 aa10.96□□□□□ -0.65
SMAD4-211ENST00000590499 TPSAB1Q15661 275 aa10.96□□□□□ -0.65
SMAD4-211ENST00000590499 RPE65Q16518 533 aa10.96□□□□□ -0.65
SMAD4-211ENST00000590499 COL28A1Q2UY09 1125 aa10.96□□□□□ -0.65
SMAD4-211ENST00000590499 ZRANB3Q5FWF4 1079 aa10.96□□□□□ -0.65
SMAD4-211ENST00000590499 C19orf48Q6RUI8 117 aa10.96□□□□□ -0.65
SMAD4-211ENST00000590499 PACS1Q6VY07 963 aa10.96□□□□□ -0.65
SMAD4-211ENST00000590499 NLRP9Q7RTR0 991 aa10.96□□□□□ -0.65
SMAD4-211ENST00000590499 GSTA5Q7RTV2 222 aa10.96□□□□□ -0.65
SMAD4-211ENST00000590499 ARHGAP22Q7Z5H3 698 aa10.96□□□□□ -0.65
SMAD4-211ENST00000590499 TRIM48Q8IWZ4 208 aa10.96□□□□□ -0.65
SMAD4-211ENST00000590499 SPACA3Q8IXA5 215 aa10.96□□□□□ -0.65
SMAD4-211ENST00000590499 RBM12BQ8IXT5 1001 aaKnown RBP10.96□□□□□ -0.65
SMAD4-211ENST00000590499 LILRA3Q8N6C8 439 aaPredicted RBP10.96□□□□□ -0.65
SMAD4-211ENST00000590499 HM13Q8TCT9 377 aa10.96□□□□□ -0.65
SMAD4-211ENST00000590499 HNRNPLLQ8WVV9 542 aaKnown RBP10.96□□□□□ -0.65
SMAD4-211ENST00000590499 DCUN1D1Q96GG9 259 aa10.96□□□□□ -0.65
SMAD4-211ENST00000590499 AHCYL2Q96HN2 611 aaKnown RBP10.96□□□□□ -0.65
SMAD4-211ENST00000590499 SGSM3Q96HU1 749 aa10.96□□□□□ -0.65
SMAD4-211ENST00000590499 AP1M1Q9BXS5 423 aa10.96□□□□□ -0.65
SMAD4-211ENST00000590499 B3GNT4Q9C0J1 378 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms