RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 TREHO43280 583 aa14.95□□□□□ -0.02
CIRBP-228ENST00000590347 CRCPO75575 148 aa14.95□□□□□ -0.02
CIRBP-228ENST00000590347 PRDX3P30048 256 aaKnown RBP14.95□□□□□ -0.02
CIRBP-228ENST00000590347 CA5AP35218 305 aa14.95□□□□□ -0.02
CIRBP-228ENST00000590347 GRK3P35626 688 aa14.95□□□□□ -0.02
CIRBP-228ENST00000590347 CLCN7P51798 805 aa14.95□□□□□ -0.02
CIRBP-228ENST00000590347 PFKFB4Q16877 469 aa14.95□□□□□ -0.02
CIRBP-228ENST00000590347 IDO2Q6ZQW0 420 aa14.95□□□□□ -0.02
CIRBP-228ENST00000590347 PHC2Q8IXK0 858 aa14.95□□□□□ -0.02
CIRBP-228ENST00000590347 YIPF7Q8N8F6 280 aa14.95□□□□□ -0.02
CIRBP-228ENST00000590347 BEST2Q8NFU1 509 aa14.95□□□□□ -0.02
CIRBP-228ENST00000590347 PABPC5Q96DU9 382 aaKnown RBP14.95□□□□□ -0.02
CIRBP-228ENST00000590347 C1QTNF7Q9BXJ2 289 aa14.95□□□□□ -0.02
CIRBP-228ENST00000590347 MCCC2Q9HCC0 563 aa14.95□□□□□ -0.02
CIRBP-228ENST00000590347 IGSF5Q9NSI5 407 aa14.95□□□□□ -0.02
CIRBP-228ENST00000590347 RNF181Q9P0P0 153 aa14.95□□□□□ -0.02
CIRBP-228ENST00000590347 POLG2Q9UHN1 485 aa14.95□□□□□ -0.02
CIRBP-228ENST00000590347 RGS10O43665 173 aa14.95□□□□□ -0.02
CIRBP-228ENST00000590347 SDHBP21912 280 aa14.95□□□□□ -0.02
CIRBP-228ENST00000590347 PKLRP30613 574 aa14.95□□□□□ -0.02
CIRBP-228ENST00000590347 NKX3-2P78367 333 aa14.95□□□□□ -0.02
CIRBP-228ENST00000590347 GPR50Q13585 617 aa14.95□□□□□ -0.02
CIRBP-228ENST00000590347 CTU1Q7Z7A3 348 aaKnown RBP14.95□□□□□ -0.02
CIRBP-228ENST00000590347 HORMAD1Q86X24 394 aa14.95□□□□□ -0.02
CIRBP-228ENST00000590347 RASSF5Q8WWW0 418 aa14.95□□□□□ -0.02
CIRBP-228ENST00000590347 AURKBQ96GD4 344 aaPredicted RBP14.95□□□□□ -0.02
CIRBP-228ENST00000590347 COPS4Q9BT78 406 aa14.95□□□□□ -0.02
CIRBP-228ENST00000590347 GBA2Q9HCG7 927 aaPredicted RBP14.95□□□□□ -0.02
CIRBP-228ENST00000590347 VNN3Q9NY84 501 aa14.95□□□□□ -0.02
CIRBP-228ENST00000590347 SLC23A1Q9UHI7 598 aa14.95□□□□□ -0.02
CIRBP-228ENST00000590347 CHRM5P08912 532 aaPredicted RBP14.95□□□□□ -0.02
CIRBP-228ENST00000590347 HOXD8P13378 290 aaPredicted RBP14.95□□□□□ -0.02
CIRBP-228ENST00000590347 DNAJB1P25685 340 aa14.95□□□□□ -0.02
CIRBP-228ENST00000590347 MCCD1P59942 119 aaPredicted RBP14.95□□□□□ -0.02
CIRBP-228ENST00000590347 PARP15Q460N3 678 aa14.95□□□□□ -0.02
CIRBP-228ENST00000590347 SPDYE7PQ495Y7 208 aa14.95□□□□□ -0.02
CIRBP-228ENST00000590347 GPAT3Q53EU6 434 aa14.95□□□□□ -0.02
CIRBP-228ENST00000590347 ZNF691Q5VV52 312 aa14.95□□□□□ -0.02
CIRBP-228ENST00000590347 HACD2Q6Y1H2 254 aa14.95□□□□□ -0.02
CIRBP-228ENST00000590347 MILR1Q7Z6M3 343 aa14.95□□□□□ -0.02
CIRBP-228ENST00000590347 SLC44A2Q8IWA5 706 aaPredicted RBP14.95□□□□□ -0.02
CIRBP-228ENST00000590347 OR4M2Q8NGB6 313 aa14.95□□□□□ -0.02
CIRBP-228ENST00000590347 C8orf48Q96LL4 319 aa14.95□□□□□ -0.02
CIRBP-228ENST00000590347 MMP27Q9H306 513 aa14.95□□□□□ -0.02
CIRBP-228ENST00000590347 ZNF408Q9H9D4 720 aa14.95□□□□□ -0.02
CIRBP-228ENST00000590347 LRRC4Q9HBW1 653 aa14.95□□□□□ -0.02
CIRBP-228ENST00000590347 RNF6Q9Y252 685 aa14.95□□□□□ -0.02
CIRBP-228ENST00000590347 ANKRD6Q9Y2G4 727 aa14.95□□□□□ -0.02
CIRBP-228ENST00000590347 CRYL1Q9Y2S2 319 aa14.95□□□□□ -0.02
CIRBP-228ENST00000590347 ZNF638Q14966 1978 aaKnown RBP14.94□□□□□ -0.02
CIRBP-228ENST00000590347 GAS2O43903 313 aaKnown RBP14.94□□□□□ -0.02
CIRBP-228ENST00000590347 B4GALT4O60513 344 aa14.94□□□□□ -0.02
CIRBP-228ENST00000590347 CILPO75339 1184 aa14.94□□□□□ -0.02
CIRBP-228ENST00000590347 AP2A1O95782 977 aa14.94□□□□□ -0.02
CIRBP-228ENST00000590347 FCER2P06734 321 aa14.94□□□□□ -0.02
CIRBP-228ENST00000590347 CYP2C8P10632 490 aa14.94□□□□□ -0.02
CIRBP-228ENST00000590347 DPYSL2Q16555 572 aa14.94□□□□□ -0.02
CIRBP-228ENST00000590347 PM20D1Q6GTS8 502 aa14.94□□□□□ -0.02
CIRBP-228ENST00000590347 TUBA3EQ6PEY2 450 aa14.94□□□□□ -0.02
CIRBP-228ENST00000590347 OTOP2Q7RTS6 562 aa14.94□□□□□ -0.02
CIRBP-228ENST00000590347 CAMKK1Q8N5S9 505 aa14.94□□□□□ -0.02
CIRBP-228ENST00000590347 OR10A6Q8NH74 314 aa14.94□□□□□ -0.02
CIRBP-228ENST00000590347 NPLOC4Q8TAT6 608 aa14.94□□□□□ -0.02
CIRBP-228ENST00000590347 SLC7A6Q92536 515 aa14.94□□□□□ -0.02
CIRBP-228ENST00000590347 OR2A14Q96R47 310 aa14.94□□□□□ -0.02
CIRBP-228ENST00000590347 ACTR8Q9H981 624 aa14.94□□□□□ -0.02
CIRBP-228ENST00000590347 EXOSC4Q9NPD3 245 aaKnown RBP14.94□□□□□ -0.02
CIRBP-228ENST00000590347 ZNF224Q9NZL3 707 aa14.94□□□□□ -0.02
CIRBP-228ENST00000590347 ADGRE2Q9UHX3 823 aa14.94□□□□□ -0.02
CIRBP-228ENST00000590347 UBXN8O00124 270 aa14.94□□□□□ -0.02
CIRBP-228ENST00000590347 TLL1O43897 1013 aa14.94□□□□□ -0.02
CIRBP-228ENST00000590347 CDK14O94921 469 aa14.94□□□□□ -0.02
CIRBP-228ENST00000590347 CPB1P15086 417 aa14.94□□□□□ -0.02
CIRBP-228ENST00000590347 KRT20P35900 424 aa14.94□□□□□ -0.02
CIRBP-228ENST00000590347 DDOSTP39656 456 aa14.94□□□□□ -0.02
CIRBP-228ENST00000590347 PTPN5P54829 565 aa14.94□□□□□ -0.02
CIRBP-228ENST00000590347 SLC35A2P78381 396 aa14.94□□□□□ -0.02
CIRBP-228ENST00000590347 SLC6A3Q01959 620 aa14.94□□□□□ -0.02
CIRBP-228ENST00000590347 YWHAHQ04917 246 aaPredicted RBP14.94□□□□□ -0.02
CIRBP-228ENST00000590347 GBX1Q14549 363 aa14.94□□□□□ -0.02
CIRBP-228ENST00000590347 STARD3Q14849 445 aa14.94□□□□□ -0.02
CIRBP-228ENST00000590347 TECRLQ5HYJ1 363 aa14.94□□□□□ -0.02
CIRBP-228ENST00000590347 BLOC1S3Q6QNY0 202 aa14.94□□□□□ -0.02
CIRBP-228ENST00000590347 CATSPERGQ6ZRH7 1159 aa14.94□□□□□ -0.02
CIRBP-228ENST00000590347 PHACTR4Q8IZ21 702 aa14.94□□□□□ -0.02
CIRBP-228ENST00000590347 PTGR2Q8N8N7 351 aaPredicted RBP14.94□□□□□ -0.02
CIRBP-228ENST00000590347 RNF149Q8NC42 400 aa14.94□□□□□ -0.02
CIRBP-228ENST00000590347 THUMPD3Q9BV44 507 aaKnown RBP14.94□□□□□ -0.02
CIRBP-228ENST00000590347 JPH1Q9HDC5 661 aaPredicted RBP14.94□□□□□ -0.02
CIRBP-228ENST00000590347 CPSF3Q9UKF6 684 aaKnown RBP14.94□□□□□ -0.02
CIRBP-228ENST00000590347 STYXL1Q9Y6J8 313 aa14.94□□□□□ -0.02
CIRBP-228ENST00000590347 OR51F1A6NGY5 319 aa14.93□□□□□ -0.02
CIRBP-228ENST00000590347 ASB14A6NK59 587 aa14.93□□□□□ -0.02
CIRBP-228ENST00000590347 PMPCBO75439 489 aa14.93□□□□□ -0.02
CIRBP-228ENST00000590347 RAP2AP10114 183 aa14.93□□□□□ -0.02
CIRBP-228ENST00000590347 UNC50Q53HI1 259 aa14.93□□□□□ -0.02
CIRBP-228ENST00000590347 OR8H3Q8N146 312 aa14.93□□□□□ -0.02
CIRBP-228ENST00000590347 CYP4Z2PQ8N1L4 340 aa14.93□□□□□ -0.02
CIRBP-228ENST00000590347 GALNT11Q8NCW6 608 aa14.93□□□□□ -0.02
CIRBP-228ENST00000590347 RNF139Q8WU17 664 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms