RNA–Protein interactions for RNA: ENST00000590000.1

SAFB2-205, Transcript of scaffold attachment factor B2, humanhuman

TSL 2

Gene SAFB2, Length 633 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB2-205ENST00000590000 TTC13Q8NBP0 860 aa13.81□□□□□ -0.2
SAFB2-205ENST00000590000 GALNT11Q8NCW6 608 aa13.81□□□□□ -0.2
SAFB2-205ENST00000590000 SPDYE1Q8NFV5 336 aaPredicted RBP13.81□□□□□ -0.2
SAFB2-205ENST00000590000 ATG4AQ8WYN0 398 aa13.81□□□□□ -0.2
SAFB2-205ENST00000590000 VPS35Q96QK1 796 aa13.81□□□□□ -0.2
SAFB2-205ENST00000590000 FICDQ9BVA6 458 aa13.81□□□□□ -0.2
SAFB2-205ENST00000590000 IL26Q9NPH9 171 aa13.81□□□□□ -0.2
SAFB2-205ENST00000590000 KCND3Q9UK17 655 aa13.81□□□□□ -0.2
SAFB2-205ENST00000590000 MDC1Q14676 2089 aaKnown RBP13.8□□□□□ -0.2
SAFB2-205ENST00000590000 TCP11X1B4DZS4 312 aa13.8□□□□□ -0.2
SAFB2-205ENST00000590000 GPR89AB7ZAQ6 455 aa13.8□□□□□ -0.2
SAFB2-205ENST00000590000 C21orf140B9A014 251 aa13.8□□□□□ -0.2
SAFB2-205ENST00000590000 VEGFDO43915 354 aa13.8□□□□□ -0.2
SAFB2-205ENST00000590000 CEACAM4O75871 244 aa13.8□□□□□ -0.2
SAFB2-205ENST00000590000 AGFG2O95081 481 aa13.8□□□□□ -0.2
SAFB2-205ENST00000590000 EPOP01588 193 aa13.8□□□□□ -0.2
SAFB2-205ENST00000590000 GPR89BP0CG08 455 aa13.8□□□□□ -0.2
SAFB2-205ENST00000590000 PTPN4P29074 926 aa13.8□□□□□ -0.2
SAFB2-205ENST00000590000 ARCN1P48444 511 aaKnown RBP13.8□□□□□ -0.2
SAFB2-205ENST00000590000 CCL11P51671 97 aa13.8□□□□□ -0.2
SAFB2-205ENST00000590000 GEMP55040 296 aa13.8□□□□□ -0.2
SAFB2-205ENST00000590000 ABRQ12979 859 aa13.8□□□□□ -0.2
SAFB2-205ENST00000590000 MPP3Q13368 585 aa13.8□□□□□ -0.2
SAFB2-205ENST00000590000 SNX1Q13596 522 aa13.8□□□□□ -0.2
SAFB2-205ENST00000590000 SLC1A5Q15758 541 aa13.8□□□□□ -0.2
SAFB2-205ENST00000590000 CHRNA6Q15825 494 aa13.8□□□□□ -0.2
SAFB2-205ENST00000590000 EIF2S3LQ2VIR3 472 aaKnown RBP13.8□□□□□ -0.2
SAFB2-205ENST00000590000 ZNF789Q5FWF6 425 aa13.8□□□□□ -0.2
SAFB2-205ENST00000590000 SEL1L2Q5TEA6 688 aa13.8□□□□□ -0.2
SAFB2-205ENST00000590000 ITPRIPL1Q6GPH6 555 aa13.8□□□□□ -0.2
SAFB2-205ENST00000590000 ZNF662Q6ZS27 426 aa13.8□□□□□ -0.2
SAFB2-205ENST00000590000 SLC13A5Q86YT5 568 aaPredicted RBP13.8□□□□□ -0.2
SAFB2-205ENST00000590000 LILRA3Q8N6C8 439 aaPredicted RBP13.8□□□□□ -0.2
SAFB2-205ENST00000590000 BEND7Q8N7W2 519 aaPredicted RBP13.8□□□□□ -0.2
SAFB2-205ENST00000590000 RBMXL3Q8N7X1 1067 aaKnown RBP13.8□□□□□ -0.2
SAFB2-205ENST00000590000 SLC35B2Q8TB61 432 aa13.8□□□□□ -0.2
SAFB2-205ENST00000590000 SSC4DQ8WTU2 575 aa13.8□□□□□ -0.2
SAFB2-205ENST00000590000 C1orf54Q8WWF1 131 aa13.8□□□□□ -0.2
SAFB2-205ENST00000590000 ZNF501Q96CX3 271 aaPredicted RBP13.8□□□□□ -0.2
SAFB2-205ENST00000590000 CXorf40BQ96DE9 158 aa13.8□□□□□ -0.2
SAFB2-205ENST00000590000 TCTN2Q96GX1 697 aa13.8□□□□□ -0.2
SAFB2-205ENST00000590000 SPATA13Q96N96 652 aa13.8□□□□□ -0.2
SAFB2-205ENST00000590000 INSM2Q96T92 566 aaPredicted RBP13.8□□□□□ -0.2
SAFB2-205ENST00000590000 FERMT1Q9BQL6 677 aa13.8□□□□□ -0.2
SAFB2-205ENST00000590000 TMEM121Q9BTD3 319 aa13.8□□□□□ -0.2
SAFB2-205ENST00000590000 NUDT9Q9BW91 350 aa13.8□□□□□ -0.2
SAFB2-205ENST00000590000 GBA3Q9H227 469 aa13.8□□□□□ -0.2
SAFB2-205ENST00000590000 CHST8Q9H2A9 424 aa13.8□□□□□ -0.2
SAFB2-205ENST00000590000 FGF21Q9NSA1 209 aa13.8□□□□□ -0.2
SAFB2-205ENST00000590000 RARRES3Q9UL19 164 aa13.8□□□□□ -0.2
SAFB2-205ENST00000590000 C5orf60A6NFR6 353 aa13.79□□□□□ -0.2
SAFB2-205ENST00000590000 SGTAO43765 313 aa13.79□□□□□ -0.2
SAFB2-205ENST00000590000 NRDCO43847 1150 aa13.79□□□□□ -0.2
SAFB2-205ENST00000590000 POP7O75817 140 aaKnown RBP13.79□□□□□ -0.2
SAFB2-205ENST00000590000 ANXA9O76027 345 aa13.79□□□□□ -0.2
SAFB2-205ENST00000590000 STK10O94804 968 aaKnown RBP13.79□□□□□ -0.2
SAFB2-205ENST00000590000 CLDN1O95832 211 aa13.79□□□□□ -0.2
SAFB2-205ENST00000590000 IDSP22304 550 aa13.79□□□□□ -0.2
SAFB2-205ENST00000590000 GDF10P55107 478 aa13.79□□□□□ -0.2
SAFB2-205ENST00000590000 ITGA1P56199 1179 aa13.79□□□□□ -0.2
SAFB2-205ENST00000590000 DMPKQ09013 629 aa13.79□□□□□ -0.2
SAFB2-205ENST00000590000 PRPSAP1Q14558 356 aa13.79□□□□□ -0.2
SAFB2-205ENST00000590000 PLEKHS1Q5SXH7 462 aa13.79□□□□□ -0.2
SAFB2-205ENST00000590000 PDPK2PQ6A1A2 396 aa13.79□□□□□ -0.2
SAFB2-205ENST00000590000 PRUNE1Q86TP1 453 aa13.79□□□□□ -0.2
SAFB2-205ENST00000590000 TRAPPC5Q8IUR0 188 aa13.79□□□□□ -0.2
SAFB2-205ENST00000590000 D2HGDHQ8N465 521 aa13.79□□□□□ -0.2
SAFB2-205ENST00000590000 AVL9Q8NBF6 648 aa13.79□□□□□ -0.2
SAFB2-205ENST00000590000 SIDT2Q8NBJ9 832 aaKnown RBP13.79□□□□□ -0.2
SAFB2-205ENST00000590000 FDCSPQ8NFU4 85 aa13.79□□□□□ -0.2
SAFB2-205ENST00000590000 BLOC1S5Q8TDH9 187 aa13.79□□□□□ -0.2
SAFB2-205ENST00000590000 C19orf60Q96EN9 201 aa13.79□□□□□ -0.2
SAFB2-205ENST00000590000 ZDHHC12Q96GR4 267 aa13.79□□□□□ -0.2
SAFB2-205ENST00000590000 ZNF514Q96K75 400 aaPredicted RBP13.79□□□□□ -0.2
SAFB2-205ENST00000590000 SLC25A23Q9BV35 468 aa13.79□□□□□ -0.2
SAFB2-205ENST00000590000 MFRPQ9BY79 579 aa13.79□□□□□ -0.2
SAFB2-205ENST00000590000 ING2Q9H160 280 aa13.79□□□□□ -0.2
SAFB2-205ENST00000590000 PCDHGA9Q9Y5G4 932 aaKnown RBP13.79□□□□□ -0.2
SAFB2-205ENST00000590000 SNRNP200O75643 2136 aaKnown RBP13.78□□□□□ -0.2
SAFB2-205ENST00000590000 POLEQ07864 2286 aa13.78□□□□□ -0.2
SAFB2-205ENST00000590000 OR5K3A6NET4 321 aa13.78□□□□□ -0.2
SAFB2-205ENST00000590000 MASP2O00187 686 aa13.78□□□□□ -0.2
SAFB2-205ENST00000590000 VPS4BO75351 444 aa13.78□□□□□ -0.2
SAFB2-205ENST00000590000 METTL18O95568 372 aa13.78□□□□□ -0.2
SAFB2-205ENST00000590000 CCNYL3P0C7X3 344 aa13.78□□□□□ -0.2
SAFB2-205ENST00000590000 ETS1P14921 441 aa13.78□□□□□ -0.2
SAFB2-205ENST00000590000 ADRA1AP35348 466 aa13.78□□□□□ -0.2
SAFB2-205ENST00000590000 TNNT3P45378 269 aaPredicted RBP13.78□□□□□ -0.2
SAFB2-205ENST00000590000 KPNA2P52292 529 aaKnown RBP13.78□□□□□ -0.2
SAFB2-205ENST00000590000 FOXL2P58012 376 aa13.78□□□□□ -0.2
SAFB2-205ENST00000590000 INPP5JQ15735 1006 aaPredicted RBP13.78□□□□□ -0.2
SAFB2-205ENST00000590000 KCTD19Q17RG1 926 aaPredicted RBP13.78□□□□□ -0.2
SAFB2-205ENST00000590000 FHL5Q5TD97 284 aa13.78□□□□□ -0.2
SAFB2-205ENST00000590000 FAM198BQ6UWH4 519 aa13.78□□□□□ -0.2
SAFB2-205ENST00000590000 UBXN4Q92575 508 aa13.78□□□□□ -0.2
SAFB2-205ENST00000590000 ALS2CR12Q96Q35 445 aa13.78□□□□□ -0.2
SAFB2-205ENST00000590000 FSD1LQ9BXM9 530 aa13.78□□□□□ -0.2
SAFB2-205ENST00000590000 TLR10Q9BXR5 811 aa13.78□□□□□ -0.2
SAFB2-205ENST00000590000 KCNF1Q9H3M0 494 aa13.78□□□□□ -0.2
SAFB2-205ENST00000590000 IL17CQ9P0M4 197 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms