RNA–Protein interactions for RNA: ENST00000589228.5

PRKAR1A-217, Transcript of protein kinase cAMP-dependent type I regulatory subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAR1A, Length 4,256 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAR1A-217ENST00000589228 BTBD3Q9Y2F9 522 aa11.88□□□□□ -0.51
PRKAR1A-217ENST00000589228 ITGB4P16144 1822 aa11.88□□□□□ -0.51
PRKAR1A-217ENST00000589228 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.88□□□□□ -0.51
PRKAR1A-217ENST00000589228 PRR23D1E9PI22 279 aaPredicted RBP11.88□□□□□ -0.51
PRKAR1A-217ENST00000589228 SAP18O00422 153 aaKnown RBP11.88□□□□□ -0.51
PRKAR1A-217ENST00000589228 CNMDO75829 334 aa11.88□□□□□ -0.51
PRKAR1A-217ENST00000589228 PRR23D2P0DMB1 279 aaPredicted RBP11.88□□□□□ -0.51
PRKAR1A-217ENST00000589228 CDH3P22223 829 aa11.88□□□□□ -0.51
PRKAR1A-217ENST00000589228 TPP2P29144 1249 aaPredicted RBP11.88□□□□□ -0.51
PRKAR1A-217ENST00000589228 BUD31P41223 144 aaPredicted RBP11.88□□□□□ -0.51
PRKAR1A-217ENST00000589228 SPANXN4Q5MJ08 99 aa11.88□□□□□ -0.51
PRKAR1A-217ENST00000589228 XKR5Q6UX68 686 aa11.88□□□□□ -0.51
PRKAR1A-217ENST00000589228 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.88□□□□□ -0.51
PRKAR1A-217ENST00000589228 CXorf40AQ8TE69 158 aa11.88□□□□□ -0.51
PRKAR1A-217ENST00000589228 TMBIM1Q969X1 311 aa11.88□□□□□ -0.51
PRKAR1A-217ENST00000589228 TADA1Q96BN2 335 aa11.88□□□□□ -0.51
PRKAR1A-217ENST00000589228 MCMBPQ9BTE3 642 aa11.88□□□□□ -0.51
PRKAR1A-217ENST00000589228 DNAJC25-GNG10A0A024R161 153 aa11.87□□□□□ -0.51
PRKAR1A-217ENST00000589228 A0A0U1RQS6 177 aa11.87□□□□□ -0.51
PRKAR1A-217ENST00000589228 A0A1W2PP18 115 aa11.87□□□□□ -0.51
PRKAR1A-217ENST00000589228 A0A1W2PRU2 124 aa11.87□□□□□ -0.51
PRKAR1A-217ENST00000589228 CLTBP09497 229 aa11.87□□□□□ -0.51
PRKAR1A-217ENST00000589228 RAP2AP10114 183 aa11.87□□□□□ -0.51
PRKAR1A-217ENST00000589228 CCND3P30281 292 aaPredicted RBP11.87□□□□□ -0.51
PRKAR1A-217ENST00000589228 SERINC3Q13530 473 aa11.87□□□□□ -0.51
PRKAR1A-217ENST00000589228 CHSY3Q70JA7 882 aa11.87□□□□□ -0.51
PRKAR1A-217ENST00000589228 ST13P5Q8NFI4 369 aaPredicted RBP11.87□□□□□ -0.51
PRKAR1A-217ENST00000589228 AURKBQ96GD4 344 aaPredicted RBP11.87□□□□□ -0.51
PRKAR1A-217ENST00000589228 HDHD2Q9H0R4 259 aa11.87□□□□□ -0.51
PRKAR1A-217ENST00000589228 IMP3Q9NV31 184 aaKnown RBP11.87□□□□□ -0.51
PRKAR1A-217ENST00000589228 IFT80Q9P2H3 777 aaPredicted RBP11.87□□□□□ -0.51
PRKAR1A-217ENST00000589228 ANGPT4Q9Y264 503 aa11.87□□□□□ -0.51
PRKAR1A-217ENST00000589228 SPACA6W5XKT8 324 aa11.87□□□□□ -0.51
PRKAR1A-217ENST00000589228 LOC730098B7Z3J9 87 aa11.87□□□□□ -0.51
PRKAR1A-217ENST00000589228 G3V2L1 256 aa11.87□□□□□ -0.51
PRKAR1A-217ENST00000589228 GJB5O95377 273 aa11.87□□□□□ -0.51
PRKAR1A-217ENST00000589228 GLUD1P00367 558 aa11.87□□□□□ -0.51
PRKAR1A-217ENST00000589228 NSG1P42857 185 aa11.87□□□□□ -0.51
PRKAR1A-217ENST00000589228 DGKEP52429 567 aa11.87□□□□□ -0.51
PRKAR1A-217ENST00000589228 CDKN2DP55273 166 aa11.87□□□□□ -0.51
PRKAR1A-217ENST00000589228 MS4A2Q01362 244 aa11.87□□□□□ -0.51
PRKAR1A-217ENST00000589228 KRR1Q13601 381 aaKnown RBP11.87□□□□□ -0.51
PRKAR1A-217ENST00000589228 TGFBIQ15582 683 aa11.87□□□□□ -0.51
PRKAR1A-217ENST00000589228 GPAT3Q53EU6 434 aa11.87□□□□□ -0.51
PRKAR1A-217ENST00000589228 PDE12Q6L8Q7 609 aaKnown RBP11.87□□□□□ -0.51
PRKAR1A-217ENST00000589228 CAPN13Q6MZZ7 669 aaPredicted RBP11.87□□□□□ -0.51
PRKAR1A-217ENST00000589228 RNF19BQ6ZMZ0 732 aa11.87□□□□□ -0.51
PRKAR1A-217ENST00000589228 CYS1Q717R9 158 aa11.87□□□□□ -0.51
PRKAR1A-217ENST00000589228 CHPFQ8IZ52 775 aa11.87□□□□□ -0.51
PRKAR1A-217ENST00000589228 MYDGFQ969H8 173 aa11.87□□□□□ -0.51
PRKAR1A-217ENST00000589228 KIAA1191Q96A73 305 aa11.87□□□□□ -0.51
PRKAR1A-217ENST00000589228 CCDC3Q9BQI4 270 aa11.87□□□□□ -0.51
PRKAR1A-217ENST00000589228 DHRS4Q9BTZ2 278 aa11.87□□□□□ -0.51
PRKAR1A-217ENST00000589228 TIMMDC1Q9NPL8 285 aa11.87□□□□□ -0.51
PRKAR1A-217ENST00000589228 CLN6Q9NWW5 311 aa11.87□□□□□ -0.51
PRKAR1A-217ENST00000589228 TRNAU1APQ9NX07 287 aaKnown RBP11.87□□□□□ -0.51
PRKAR1A-217ENST00000589228 ENOPH1Q9UHY7 261 aa11.87□□□□□ -0.51
PRKAR1A-217ENST00000589228 ERGIC3Q9Y282 383 aa11.87□□□□□ -0.51
PRKAR1A-217ENST00000589228 COL18A1P39060 1754 aa11.87□□□□□ -0.51
PRKAR1A-217ENST00000589228 RGS10O43665 173 aa11.87□□□□□ -0.51
PRKAR1A-217ENST00000589228 SCELO95171 688 aa11.87□□□□□ -0.51
PRKAR1A-217ENST00000589228 TNNI3P19429 210 aa11.87□□□□□ -0.51
PRKAR1A-217ENST00000589228 FMO3P31513 532 aa11.87□□□□□ -0.51
PRKAR1A-217ENST00000589228 SLC11A1P49279 550 aa11.87□□□□□ -0.51
PRKAR1A-217ENST00000589228 PIK3R6Q5UE93 754 aa11.87□□□□□ -0.51
PRKAR1A-217ENST00000589228 ZNF57Q68EA5 555 aaPredicted RBP11.87□□□□□ -0.51
PRKAR1A-217ENST00000589228 PTCHD4Q6ZW05 846 aa11.87□□□□□ -0.51
PRKAR1A-217ENST00000589228 DSG4Q86SJ6 1040 aa11.87□□□□□ -0.51
PRKAR1A-217ENST00000589228 IFNL1Q8IU54 200 aa11.87□□□□□ -0.51
PRKAR1A-217ENST00000589228 SLC34A3Q8N130 599 aa11.87□□□□□ -0.51
PRKAR1A-217ENST00000589228 TTC9BQ8N6N2 239 aa11.87□□□□□ -0.51
PRKAR1A-217ENST00000589228 ANKRD49Q8WVL7 239 aa11.87□□□□□ -0.51
PRKAR1A-217ENST00000589228 GTPBP3Q969Y2 492 aaKnown RBP11.87□□□□□ -0.51
PRKAR1A-217ENST00000589228 CRISPLD1Q9H336 500 aa11.87□□□□□ -0.51
PRKAR1A-217ENST00000589228 CTPS2Q9NRF8 586 aa11.87□□□□□ -0.51
PRKAR1A-217ENST00000589228 SLC22A14Q9Y267 594 aa11.87□□□□□ -0.51
PRKAR1A-217ENST00000589228 CAB39Q9Y376 341 aaPredicted RBP11.87□□□□□ -0.51
PRKAR1A-217ENST00000589228 LTBP3Q9NS15 1303 aa11.87□□□□□ -0.51
PRKAR1A-217ENST00000589228 LCHNA4D1U4 455 aa11.86□□□□□ -0.51
PRKAR1A-217ENST00000589228 MTMR11A4FU01 709 aa11.86□□□□□ -0.51
PRKAR1A-217ENST00000589228 J3QRK9 145 aa11.86□□□□□ -0.51
PRKAR1A-217ENST00000589228 TFECO14948 347 aaPredicted RBP11.86□□□□□ -0.51
PRKAR1A-217ENST00000589228 TULP3O75386 442 aa11.86□□□□□ -0.51
PRKAR1A-217ENST00000589228 FAM163BP0C2L3 166 aa11.86□□□□□ -0.51
PRKAR1A-217ENST00000589228 CDH12P55289 794 aa11.86□□□□□ -0.51
PRKAR1A-217ENST00000589228 NFKB2Q00653 900 aa11.86□□□□□ -0.51
PRKAR1A-217ENST00000589228 DAG1Q14118 895 aa11.86□□□□□ -0.51
PRKAR1A-217ENST00000589228 PTGR1Q14914 329 aa11.86□□□□□ -0.51
PRKAR1A-217ENST00000589228 TIMM50Q3ZCQ8 353 aa11.86□□□□□ -0.51
PRKAR1A-217ENST00000589228 CMTM8Q8IZV2 173 aa11.86□□□□□ -0.51
PRKAR1A-217ENST00000589228 FBXL8Q96CD0 374 aa11.86□□□□□ -0.51
PRKAR1A-217ENST00000589228 IMP4Q96G21 291 aaKnown RBP11.86□□□□□ -0.51
PRKAR1A-217ENST00000589228 GPR62Q9BZJ7 368 aa11.86□□□□□ -0.51
PRKAR1A-217ENST00000589228 WDR6Q9NNW5 1121 aaKnown RBP11.86□□□□□ -0.51
PRKAR1A-217ENST00000589228 ACTR3BQ9P1U1 418 aa11.86□□□□□ -0.51
PRKAR1A-217ENST00000589228 ACTL7AQ9Y615 435 aa11.86□□□□□ -0.51
PRKAR1A-217ENST00000589228 TRBV23OR9-2A0A075B6M9 112 aa11.86□□□□□ -0.51
PRKAR1A-217ENST00000589228 ILVBLA1L0T0 632 aa11.86□□□□□ -0.51
PRKAR1A-217ENST00000589228 SLC28A2O43868 658 aa11.86□□□□□ -0.51
PRKAR1A-217ENST00000589228 S1PR4O95977 384 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms