RNA–Protein interactions for RNA: ENST00000589216.1

PTPN2-208, Transcript of protein tyrosine phosphatase, non-receptor type 2, human

TSL 3

Gene PTPN2, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN2-208	ENST00000589216	NVL	O15381	856 aa	Known RBP	9.62	□□□□□ -0.87
PTPN2-208	ENST00000589216	RRP8	O43159	456 aa	Known RBP	9.62	□□□□□ -0.87
PTPN2-208	ENST00000589216	VAPB	O95292	243 aa		9.62	□□□□□ -0.87
PTPN2-208	ENST00000589216	ANKRD34C	P0C6C1	535 aa		9.62	□□□□□ -0.87
PTPN2-208	ENST00000589216	AMD1	P17707	334 aa		9.62	□□□□□ -0.87
PTPN2-208	ENST00000589216	TCP1	P17987	556 aa	Known RBP	9.62	□□□□□ -0.87
PTPN2-208	ENST00000589216	WT1	P19544	449 aa	Predicted RBP	9.62	□□□□□ -0.87
PTPN2-208	ENST00000589216	CSTF2	P33240	577 aa	Known RBP eCLIP	9.62	□□□□□ -0.87
PTPN2-208	ENST00000589216	SEPHS1	P49903	392 aa		9.62	□□□□□ -0.87
PTPN2-208	ENST00000589216	SH3BP2	P78314	561 aa		9.62	□□□□□ -0.87
PTPN2-208	ENST00000589216	CDK16	Q00536	496 aa		9.62	□□□□□ -0.87
PTPN2-208	ENST00000589216	LAMB3	Q13751	1172 aa		9.62	□□□□□ -0.87
PTPN2-208	ENST00000589216	PTK6	Q13882	451 aa		9.62	□□□□□ -0.87
PTPN2-208	ENST00000589216	RNASEH2B	Q5TBB1	312 aa	Known RBP	9.62	□□□□□ -0.87
PTPN2-208	ENST00000589216	KIAA0930	Q6ICG6	404 aa	Predicted RBP	9.62	□□□□□ -0.87
PTPN2-208	ENST00000589216	FBXO38	Q6PIJ6	1188 aa		9.62	□□□□□ -0.87
PTPN2-208	ENST00000589216	LRRC69	Q6ZNQ3	347 aa		9.62	□□□□□ -0.87
PTPN2-208	ENST00000589216	NLRP9	Q7RTR0	991 aa		9.62	□□□□□ -0.87
PTPN2-208	ENST00000589216	PRSS42	Q7Z5A4	293 aa		9.62	□□□□□ -0.87
PTPN2-208	ENST00000589216	VRK3	Q8IV63	474 aa		9.62	□□□□□ -0.87
PTPN2-208	ENST00000589216	RBM12B	Q8IXT5	1001 aa	Known RBP	9.62	□□□□□ -0.87
PTPN2-208	ENST00000589216	KRT222	Q8N1A0	295 aa		9.62	□□□□□ -0.87
PTPN2-208	ENST00000589216	NAT8L	Q8N9F0	302 aa		9.62	□□□□□ -0.87
PTPN2-208	ENST00000589216	PHC3	Q8NDX5	983 aa		9.62	□□□□□ -0.87
PTPN2-208	ENST00000589216	ELMO1	Q92556	727 aa		9.62	□□□□□ -0.87
PTPN2-208	ENST00000589216	PEX13	Q92968	403 aa		9.62	□□□□□ -0.87
PTPN2-208	ENST00000589216	TBRG4	Q969Z0	631 aa	Known RBP eCLIP	9.62	□□□□□ -0.87
PTPN2-208	ENST00000589216	ZNF669	Q96BR6	464 aa	Predicted RBP	9.62	□□□□□ -0.87
PTPN2-208	ENST00000589216	SGSM3	Q96HU1	749 aa		9.62	□□□□□ -0.87
PTPN2-208	ENST00000589216	FCRL3	Q96P31	734 aa	Predicted RBP	9.62	□□□□□ -0.87
PTPN2-208	ENST00000589216	NAP1L3	Q99457	506 aa	Predicted RBP	9.62	□□□□□ -0.87
PTPN2-208	ENST00000589216	NAPG	Q99747	312 aa	Predicted RBP	9.62	□□□□□ -0.87
PTPN2-208	ENST00000589216	DPYSL5	Q9BPU6	564 aa		9.62	□□□□□ -0.87
PTPN2-208	ENST00000589216	TRIM51	Q9BSJ1	452 aa		9.62	□□□□□ -0.87
PTPN2-208	ENST00000589216	P2RY12	Q9H244	342 aa		9.62	□□□□□ -0.87
PTPN2-208	ENST00000589216	ZNF768	Q9H5H4	540 aa	Known RBP	9.62	□□□□□ -0.87
PTPN2-208	ENST00000589216	KIR3DX1	Q9H7L2	352 aa		9.62	□□□□□ -0.87
PTPN2-208	ENST00000589216	BFAR	Q9NZS9	450 aa		9.62	□□□□□ -0.87
PTPN2-208	ENST00000589216	ACSL5	Q9ULC5	683 aa		9.62	□□□□□ -0.87
PTPN2-208	ENST00000589216	CDYL	Q9Y232	598 aa		9.62	□□□□□ -0.87
PTPN2-208	ENST00000589216	SPTB	P11277	2137 aa		9.61	□□□□□ -0.87
PTPN2-208	ENST00000589216	FER1L5	A0AVI2	2057 aa		9.61	□□□□□ -0.87
PTPN2-208	ENST00000589216	IGHV5-51	A0A0C4DH38	117 aa		9.61	□□□□□ -0.87
PTPN2-208	ENST00000589216	TEX51	A0A1B0GUA7	166 aa		9.61	□□□□□ -0.87
PTPN2-208	ENST00000589216	C17orf113	A0A1B0GUU1	675 aa		9.61	□□□□□ -0.87
PTPN2-208	ENST00000589216	SLC5A10	A0PJK1	596 aa		9.61	□□□□□ -0.87
PTPN2-208	ENST00000589216	KLHL33	A6NCF5	533 aa		9.61	□□□□□ -0.87
PTPN2-208	ENST00000589216	KRT87P	A6NCN2	255 aa		9.61	□□□□□ -0.87
PTPN2-208	ENST00000589216	OR5K3	A6NET4	321 aa		9.61	□□□□□ -0.87
PTPN2-208	ENST00000589216		B4E171	279 aa		9.61	□□□□□ -0.87
PTPN2-208	ENST00000589216	BHMG1	C9JSJ3	638 aa	Predicted RBP	9.61	□□□□□ -0.87
PTPN2-208	ENST00000589216	CD3EAP	O15446	510 aa	Known RBP	9.61	□□□□□ -0.87
PTPN2-208	ENST00000589216	AP2A2	O94973	939 aa		9.61	□□□□□ -0.87
PTPN2-208	ENST00000589216	TPBGL	P0DKB5	382 aa		9.61	□□□□□ -0.87
PTPN2-208	ENST00000589216	LIPC	P11150	499 aa		9.61	□□□□□ -0.87
PTPN2-208	ENST00000589216	CCR7	P32248	378 aa		9.61	□□□□□ -0.87
PTPN2-208	ENST00000589216	TSPAN7	P41732	249 aa		9.61	□□□□□ -0.87
PTPN2-208	ENST00000589216	NPY2R	P49146	381 aa		9.61	□□□□□ -0.87
PTPN2-208	ENST00000589216	CXADR	P78310	365 aa		9.61	□□□□□ -0.87
PTPN2-208	ENST00000589216	KCNAB1	Q14722	419 aa		9.61	□□□□□ -0.87
PTPN2-208	ENST00000589216	FASTKD1	Q53R41	847 aa	Known RBP	9.61	□□□□□ -0.87
PTPN2-208	ENST00000589216	ZNF789	Q5FWF6	425 aa		9.61	□□□□□ -0.87
PTPN2-208	ENST00000589216	CTSL3P	Q5NE16	218 aa		9.61	□□□□□ -0.87
PTPN2-208	ENST00000589216	PLXDC1	Q8IUK5	500 aa		9.61	□□□□□ -0.87
PTPN2-208	ENST00000589216	KLHL7	Q8IXQ5	586 aa		9.61	□□□□□ -0.87
PTPN2-208	ENST00000589216	UNC5B	Q8IZJ1	945 aa		9.61	□□□□□ -0.87
PTPN2-208	ENST00000589216	OR5AR1	Q8NGP9	310 aa		9.61	□□□□□ -0.87
PTPN2-208	ENST00000589216	LPGAT1	Q92604	370 aa		9.61	□□□□□ -0.87
PTPN2-208	ENST00000589216	SLCO2A1	Q92959	643 aa		9.61	□□□□□ -0.87
PTPN2-208	ENST00000589216	BBC3	Q96PG8	261 aa	Predicted RBP	9.61	□□□□□ -0.87
PTPN2-208	ENST00000589216	MAP3K3	Q99759	626 aa		9.61	□□□□□ -0.87
PTPN2-208	ENST00000589216	WDR83	Q9BRX9	315 aa	Known RBP	9.61	□□□□□ -0.87
PTPN2-208	ENST00000589216	PRORY	Q9H606	182 aa		9.61	□□□□□ -0.87
PTPN2-208	ENST00000589216	XKR8	Q9H6D3	395 aa		9.61	□□□□□ -0.87
PTPN2-208	ENST00000589216	VPS37B	Q9H9H4	285 aa		9.61	□□□□□ -0.87
PTPN2-208	ENST00000589216	MRM3	Q9HC36	420 aa	Known RBP	9.61	□□□□□ -0.87
PTPN2-208	ENST00000589216	WDR70	Q9NW82	654 aa		9.61	□□□□□ -0.87
PTPN2-208	ENST00000589216	SLC39A1	Q9NY26	324 aa		9.61	□□□□□ -0.87
PTPN2-208	ENST00000589216	AKAP7	Q9P0M2	348 aa	Predicted RBP	9.61	□□□□□ -0.87
PTPN2-208	ENST00000589216	EPHA6	Q9UF33	1036 aa		9.61	□□□□□ -0.87
PTPN2-208	ENST00000589216	ASIC3	Q9UHC3	531 aa		9.61	□□□□□ -0.87
PTPN2-208	ENST00000589216	ICK	Q9UPZ9	632 aa		9.61	□□□□□ -0.87
PTPN2-208	ENST00000589216	RUVBL2	Q9Y230	463 aa	Known RBP	9.61	□□□□□ -0.87
PTPN2-208	ENST00000589216	PCDHGA3	Q9Y5H0	932 aa		9.61	□□□□□ -0.87
PTPN2-208	ENST00000589216	TLN1	Q9Y490	2541 aa	Known RBP	9.61	□□□□□ -0.87
PTPN2-208	ENST00000589216	ZCWPW2	A0A1B0GU75	182 aa		9.6	□□□□□ -0.87
PTPN2-208	ENST00000589216	OR6C74	A6NCV1	312 aa		9.6	□□□□□ -0.87
PTPN2-208	ENST00000589216	IQCJ-SCHIP1	C9J366	451 aa	Predicted RBP	9.6	□□□□□ -0.87
PTPN2-208	ENST00000589216	BTN3A3	O00478	584 aa		9.6	□□□□□ -0.87
PTPN2-208	ENST00000589216	BTN3A1	O00481	513 aa		9.6	□□□□□ -0.87
PTPN2-208	ENST00000589216	DNALI1	O14645	258 aa	Predicted RBP	9.6	□□□□□ -0.87
PTPN2-208	ENST00000589216	LIN7A	O14910	233 aa	Predicted RBP	9.6	□□□□□ -0.87
PTPN2-208	ENST00000589216	TP73	O15350	636 aa		9.6	□□□□□ -0.87
PTPN2-208	ENST00000589216	EFS	O43281	561 aa		9.6	□□□□□ -0.87
PTPN2-208	ENST00000589216	RASSF9	O75901	435 aa		9.6	□□□□□ -0.87
PTPN2-208	ENST00000589216	TIAF1	O95411	115 aa		9.6	□□□□□ -0.87
PTPN2-208	ENST00000589216	FTH1	P02794	183 aa		9.6	□□□□□ -0.87
PTPN2-208	ENST00000589216	OR56A5	P0C7T3	313 aa		9.6	□□□□□ -0.87
PTPN2-208	ENST00000589216	ZNF28	P17035	718 aa		9.6	□□□□□ -0.87
PTPN2-208	ENST00000589216	IVD	P26440	423 aa		9.6	□□□□□ -0.87

Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms