RNA–Protein interactions for RNA: ENST00000588907.2

SCAMP4-211, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-211ENST00000588907 PATE3B3GLJ2 98 aa16.61■□□□□ 0.25
SCAMP4-211ENST00000588907 PHGDHO43175 533 aaKnown RBP16.61■□□□□ 0.25
SCAMP4-211ENST00000588907 PCDHGA12O60330 932 aa16.61■□□□□ 0.25
SCAMP4-211ENST00000588907 RFPL1O75677 317 aa16.61■□□□□ 0.25
SCAMP4-211ENST00000588907 C8GP07360 202 aa16.61■□□□□ 0.25
SCAMP4-211ENST00000588907 ANXA6P08133 673 aa16.61■□□□□ 0.25
SCAMP4-211ENST00000588907 GSTA1P08263 222 aa16.61■□□□□ 0.25
SCAMP4-211ENST00000588907 LTA4HP09960 611 aaKnown RBP16.61■□□□□ 0.25
SCAMP4-211ENST00000588907 F3P13726 295 aa16.61■□□□□ 0.25
SCAMP4-211ENST00000588907 IRX4P78413 519 aa16.61■□□□□ 0.25
SCAMP4-211ENST00000588907 SP140Q13342 867 aa16.61■□□□□ 0.25
SCAMP4-211ENST00000588907 SUZ12Q15022 739 aaKnown RBP16.61■□□□□ 0.25
SCAMP4-211ENST00000588907 CSRP2Q16527 193 aa16.61■□□□□ 0.25
SCAMP4-211ENST00000588907 UAP1L1Q3KQV9 507 aa16.61■□□□□ 0.25
SCAMP4-211ENST00000588907 SLC30A9Q6PML9 568 aa16.61■□□□□ 0.25
SCAMP4-211ENST00000588907 ABRAXAS1Q6UWZ7 409 aa16.61■□□□□ 0.25
SCAMP4-211ENST00000588907 UNC5DQ6UXZ4 953 aa16.61■□□□□ 0.25
SCAMP4-211ENST00000588907 TRABD2AQ86V40 505 aa16.61■□□□□ 0.25
SCAMP4-211ENST00000588907 CPNE9Q8IYJ1 553 aa16.61■□□□□ 0.25
SCAMP4-211ENST00000588907 ACVR1CQ8NER5 493 aa16.61■□□□□ 0.25
SCAMP4-211ENST00000588907 MAGEC3Q8TD91 643 aa16.61■□□□□ 0.25
SCAMP4-211ENST00000588907 SKA2Q8WVK7 121 aaPredicted RBP16.61■□□□□ 0.25
SCAMP4-211ENST00000588907 LINGO1Q96FE5 620 aa16.61■□□□□ 0.25
SCAMP4-211ENST00000588907 SMC6Q96SB8 1091 aa16.61■□□□□ 0.25
SCAMP4-211ENST00000588907 OR52A5Q9H2C5 316 aa16.61■□□□□ 0.25
SCAMP4-211ENST00000588907 TCEAL2Q9H3H9 227 aaPredicted RBP16.61■□□□□ 0.25
SCAMP4-211ENST00000588907 NMRAL1Q9HBL8 299 aa16.61■□□□□ 0.25
SCAMP4-211ENST00000588907 TMBIM4Q9HC24 238 aa16.61■□□□□ 0.25
SCAMP4-211ENST00000588907 TAAR2Q9P1P5 351 aa16.61■□□□□ 0.25
SCAMP4-211ENST00000588907 CDYLQ9Y232 598 aa16.61■□□□□ 0.25
SCAMP4-211ENST00000588907 PCDHGB2Q9Y5G2 931 aa16.61■□□□□ 0.25
SCAMP4-211ENST00000588907 KNL1Q8NG31 2342 aa16.61■□□□□ 0.25
SCAMP4-211ENST00000588907 RALGAPA1Q6GYQ0 2036 aa16.6■□□□□ 0.25
SCAMP4-211ENST00000588907 KIR2DS5A0A0G2JLQ3 304 aa16.6■□□□□ 0.25
SCAMP4-211ENST00000588907 A0A0G2JNG1 304 aa16.6■□□□□ 0.25
SCAMP4-211ENST00000588907 LNP1A1A4G5 178 aa16.6■□□□□ 0.25
SCAMP4-211ENST00000588907 KIR2DS3K7RE56 304 aa16.6■□□□□ 0.25
SCAMP4-211ENST00000588907 SCAMP1O15126 338 aa16.6■□□□□ 0.25
SCAMP4-211ENST00000588907 KDM1AO60341 852 aa16.6■□□□□ 0.25
SCAMP4-211ENST00000588907 KLHL2O95198 593 aa16.6■□□□□ 0.25
SCAMP4-211ENST00000588907 CCDC166P0CW27 439 aa16.6■□□□□ 0.25
SCAMP4-211ENST00000588907 KRT4P19013 534 aa16.6■□□□□ 0.25
SCAMP4-211ENST00000588907 NDUFS1P28331 727 aa16.6■□□□□ 0.25
SCAMP4-211ENST00000588907 CCNFP41002 786 aa16.6■□□□□ 0.25
SCAMP4-211ENST00000588907 CCT5P48643 541 aa16.6■□□□□ 0.25
SCAMP4-211ENST00000588907 KIR2DS5Q14953 304 aa16.6■□□□□ 0.25
SCAMP4-211ENST00000588907 ACSBG2Q5FVE4 666 aa16.6■□□□□ 0.25
SCAMP4-211ENST00000588907 TNFAIP8L3Q5GJ75 292 aa16.6■□□□□ 0.25
SCAMP4-211ENST00000588907 AGBL2Q5U5Z8 902 aa16.6■□□□□ 0.25
SCAMP4-211ENST00000588907 FAM83HQ6ZRV2 1179 aaPredicted RBP16.6■□□□□ 0.25
SCAMP4-211ENST00000588907 ADAMTSL2Q86TH1 951 aa16.6■□□□□ 0.25
SCAMP4-211ENST00000588907 NRROSQ86YC3 692 aa16.6■□□□□ 0.25
SCAMP4-211ENST00000588907 CYP4X1Q8N118 509 aa16.6■□□□□ 0.25
SCAMP4-211ENST00000588907 SLC30A3Q99726 388 aa16.6■□□□□ 0.25
SCAMP4-211ENST00000588907 SH3GL2Q99962 352 aa16.6■□□□□ 0.25
SCAMP4-211ENST00000588907 GTPBP2Q9BX10 602 aaKnown RBP16.6■□□□□ 0.25
SCAMP4-211ENST00000588907 VPS11Q9H270 941 aa16.6■□□□□ 0.25
SCAMP4-211ENST00000588907 STN1Q9H668 368 aaKnown RBP16.6■□□□□ 0.25
SCAMP4-211ENST00000588907 SSU72Q9NP77 194 aaKnown RBP16.6■□□□□ 0.25
SCAMP4-211ENST00000588907 DNAAF2Q9NVR5 837 aaKnown RBP16.6■□□□□ 0.25
SCAMP4-211ENST00000588907 ZNF446Q9NWS9 450 aa16.6■□□□□ 0.25
SCAMP4-211ENST00000588907 MKS1Q9NXB0 559 aa16.6■□□□□ 0.25
SCAMP4-211ENST00000588907 NLGN3Q9NZ94 848 aa16.6■□□□□ 0.25
SCAMP4-211ENST00000588907 NCKIPSDQ9NZQ3 722 aa16.6■□□□□ 0.25
SCAMP4-211ENST00000588907 GALPQ9UBC7 116 aa16.6■□□□□ 0.25
SCAMP4-211ENST00000588907 FAM8A1Q9UBU6 413 aa16.6■□□□□ 0.25
SCAMP4-211ENST00000588907 DCDC2Q9UHG0 476 aa16.6■□□□□ 0.25
SCAMP4-211ENST00000588907 TMEM131Q92545 1883 aa16.6■□□□□ 0.25
SCAMP4-211ENST00000588907 A6NCN8 305 aa16.59■□□□□ 0.25
SCAMP4-211ENST00000588907 PABPN1LA6NDY0 278 aaKnown RBP16.59■□□□□ 0.25
SCAMP4-211ENST00000588907 AGPSO00116 658 aa16.59■□□□□ 0.25
SCAMP4-211ENST00000588907 SLC16A5O15375 505 aa16.59■□□□□ 0.25
SCAMP4-211ENST00000588907 GLRA3O75311 464 aa16.59■□□□□ 0.25
SCAMP4-211ENST00000588907 SASH3O75995 380 aa16.59■□□□□ 0.25
SCAMP4-211ENST00000588907 TSPAN12O95859 305 aa16.59■□□□□ 0.25
SCAMP4-211ENST00000588907 ENO2P09104 434 aaPredicted RBP16.59■□□□□ 0.25
SCAMP4-211ENST00000588907 AK4P27144 223 aaPredicted RBP16.59■□□□□ 0.25
SCAMP4-211ENST00000588907 PREPP48147 710 aa16.59■□□□□ 0.25
SCAMP4-211ENST00000588907 SLC14A1Q13336 389 aa16.59■□□□□ 0.25
SCAMP4-211ENST00000588907 ZNF460Q14592 562 aa16.59■□□□□ 0.25
SCAMP4-211ENST00000588907 HSP90B2PQ58FF3 399 aa16.59■□□□□ 0.25
SCAMP4-211ENST00000588907 CAPRIN2Q6IMN6 1127 aaKnown RBP16.59■□□□□ 0.25
SCAMP4-211ENST00000588907 TTC23LQ6PF05 361 aa16.59■□□□□ 0.25
SCAMP4-211ENST00000588907 RBM12BQ8IXT5 1001 aaKnown RBP16.59■□□□□ 0.25
SCAMP4-211ENST00000588907 MINDY1Q8N5J2 469 aa16.59■□□□□ 0.25
SCAMP4-211ENST00000588907 FAM46DQ8NEK8 389 aa16.59■□□□□ 0.25
SCAMP4-211ENST00000588907 SAP25Q8TEE9 199 aa16.59■□□□□ 0.25
SCAMP4-211ENST00000588907 EEF1AKMT1Q8WVE0 214 aa16.59■□□□□ 0.25
SCAMP4-211ENST00000588907 IQCGQ9H095 443 aaKnown RBP16.59■□□□□ 0.25
SCAMP4-211ENST00000588907 SEMA4GQ9NTN9 838 aa16.59■□□□□ 0.25
SCAMP4-211ENST00000588907 PCMTD2Q9NV79 361 aa16.59■□□□□ 0.25
SCAMP4-211ENST00000588907 FAM86C1Q9NVL1 165 aa16.59■□□□□ 0.25
SCAMP4-211ENST00000588907 TBC1D29Q9UFV1 150 aa16.59■□□□□ 0.25
SCAMP4-211ENST00000588907 COLEC10Q9Y6Z7 277 aa16.59■□□□□ 0.25
SCAMP4-211ENST00000588907 HMGB1P1B2RPK0 211 aaPredicted RBP16.58■□□□□ 0.24
SCAMP4-211ENST00000588907 SNX2O60749 519 aa16.58■□□□□ 0.24
SCAMP4-211ENST00000588907 MATN4O95460 622 aa16.58■□□□□ 0.24
SCAMP4-211ENST00000588907 CATP04040 527 aaKnown RBP16.58■□□□□ 0.24
SCAMP4-211ENST00000588907 PYGBP11216 843 aa16.58■□□□□ 0.24
SCAMP4-211ENST00000588907 SLC18A2Q05940 514 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms