RNA–Protein interactions for RNA: ENST00000588885.1

RFX1-204, Transcript of regulatory factor X1, humanhuman

TSL 3

Gene RFX1, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-204ENST00000588885 SNF8Q96H20 258 aa11.31□□□□□ -0.6
RFX1-204ENST00000588885 INSM2Q96T92 566 aaPredicted RBP11.31□□□□□ -0.6
RFX1-204ENST00000588885 PARD6BQ9BYG5 372 aa11.31□□□□□ -0.6
RFX1-204ENST00000588885 WWP1Q9H0M0 922 aa11.31□□□□□ -0.6
RFX1-204ENST00000588885 ETNK1Q9HBU6 452 aa11.31□□□□□ -0.6
RFX1-204ENST00000588885 APMAPQ9HDC9 416 aa11.31□□□□□ -0.6
RFX1-204ENST00000588885 WASH6PQ9NQA3 447 aa11.31□□□□□ -0.6
RFX1-204ENST00000588885 IMP3Q9NV31 184 aaKnown RBP11.31□□□□□ -0.6
RFX1-204ENST00000588885 SMOXQ9NWM0 555 aa11.31□□□□□ -0.6
RFX1-204ENST00000588885 PAK5Q9P286 719 aa11.31□□□□□ -0.6
RFX1-204ENST00000588885 FEZ2Q9UHY8 353 aaPredicted RBP11.31□□□□□ -0.6
RFX1-204ENST00000588885 ACSL6Q9UKU0 697 aa11.31□□□□□ -0.6
RFX1-204ENST00000588885 RAB21Q9UL25 225 aa11.31□□□□□ -0.6
RFX1-204ENST00000588885 CFAP46Q8IYW2 2715 aa11.3□□□□□ -0.6
RFX1-204ENST00000588885 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.3□□□□□ -0.6
RFX1-204ENST00000588885 MGAT4DA6NG13 374 aa11.3□□□□□ -0.6
RFX1-204ENST00000588885 B4E171 279 aa11.3□□□□□ -0.6
RFX1-204ENST00000588885 E7EVH7 732 aa11.3□□□□□ -0.6
RFX1-204ENST00000588885 STMND1H3BQB6 276 aa11.3□□□□□ -0.6
RFX1-204ENST00000588885 PSMD3O43242 534 aa11.3□□□□□ -0.6
RFX1-204ENST00000588885 KCNJ13O60928 360 aa11.3□□□□□ -0.6
RFX1-204ENST00000588885 ZNF189O75820 626 aaPredicted RBP11.3□□□□□ -0.6
RFX1-204ENST00000588885 RASSF9O75901 435 aa11.3□□□□□ -0.6
RFX1-204ENST00000588885 TMEM63AO94886 807 aa11.3□□□□□ -0.6
RFX1-204ENST00000588885 AP2A1O95782 977 aa11.3□□□□□ -0.6
RFX1-204ENST00000588885 STIP1P31948 543 aaKnown RBP11.3□□□□□ -0.6
RFX1-204ENST00000588885 TSPAN7P41732 249 aa11.3□□□□□ -0.6
RFX1-204ENST00000588885 GRIA1P42261 906 aa11.3□□□□□ -0.6
RFX1-204ENST00000588885 PPP1CAP62136 330 aa11.3□□□□□ -0.6
RFX1-204ENST00000588885 CYP4F2P78329 520 aa11.3□□□□□ -0.6
RFX1-204ENST00000588885 BASP1P80723 227 aaKnown RBP11.3□□□□□ -0.6
RFX1-204ENST00000588885 MC2RQ01718 297 aa11.3□□□□□ -0.6
RFX1-204ENST00000588885 FOXM1Q08050 763 aa11.3□□□□□ -0.6
RFX1-204ENST00000588885 ANKRD22Q5VYY1 191 aa11.3□□□□□ -0.6
RFX1-204ENST00000588885 METRNLQ641Q3 311 aa11.3□□□□□ -0.6
RFX1-204ENST00000588885 IRGCQ6NXR0 463 aa11.3□□□□□ -0.6
RFX1-204ENST00000588885 WDR93Q6P2C0 686 aa11.3□□□□□ -0.6
RFX1-204ENST00000588885 PCSK4Q6UW60 755 aa11.3□□□□□ -0.6
RFX1-204ENST00000588885 SNX20Q7Z614 316 aa11.3□□□□□ -0.6
RFX1-204ENST00000588885 SERPINA9Q86WD7 417 aa11.3□□□□□ -0.6
RFX1-204ENST00000588885 DTX1Q86Y01 620 aa11.3□□□□□ -0.6
RFX1-204ENST00000588885 KLHDC8BQ8IXV7 354 aa11.3□□□□□ -0.6
RFX1-204ENST00000588885 IFT20Q8IY31 132 aa11.3□□□□□ -0.6
RFX1-204ENST00000588885 NXPE1Q8N323 547 aa11.3□□□□□ -0.6
RFX1-204ENST00000588885 BMPERQ8N8U9 685 aa11.3□□□□□ -0.6
RFX1-204ENST00000588885 DNAAF3Q8N9W5 541 aa11.3□□□□□ -0.6
RFX1-204ENST00000588885 IFT81Q8WYA0 676 aa11.3□□□□□ -0.6
RFX1-204ENST00000588885 ULK4Q96C45 1275 aa11.3□□□□□ -0.6
RFX1-204ENST00000588885 ELMO2Q96JJ3 720 aa11.3□□□□□ -0.6
RFX1-204ENST00000588885 C9orf72Q96LT7 481 aa11.3□□□□□ -0.6
RFX1-204ENST00000588885 COPS8Q99627 209 aa11.3□□□□□ -0.6
RFX1-204ENST00000588885 ARHGAP9Q9BRR9 750 aa11.3□□□□□ -0.6
RFX1-204ENST00000588885 EPB41L1Q9H4G0 881 aa11.3□□□□□ -0.6
RFX1-204ENST00000588885 UCK1Q9HA47 277 aa11.3□□□□□ -0.6
RFX1-204ENST00000588885 FAM114A2Q9NRY5 505 aa11.3□□□□□ -0.6
RFX1-204ENST00000588885 POT1Q9NUX5 634 aa11.3□□□□□ -0.6
RFX1-204ENST00000588885 DNMT3AQ9Y6K1 912 aaPredicted RBP11.3□□□□□ -0.6
RFX1-204ENST00000588885 BOD1L1Q8NFC6 3051 aa11.29□□□□□ -0.6
RFX1-204ENST00000588885 TCRBV7S3A2A0A539 114 aa11.29□□□□□ -0.6
RFX1-204ENST00000588885 OR51F1A6NGY5 319 aa11.29□□□□□ -0.6
RFX1-204ENST00000588885 TP73O15350 636 aa11.29□□□□□ -0.6
RFX1-204ENST00000588885 SGTAO43765 313 aa11.29□□□□□ -0.6
RFX1-204ENST00000588885 ZIC2O95409 532 aaPredicted RBP11.29□□□□□ -0.6
RFX1-204ENST00000588885 RALBP11234 206 aa11.29□□□□□ -0.6
RFX1-204ENST00000588885 ATP1B2P14415 290 aaPredicted RBP11.29□□□□□ -0.6
RFX1-204ENST00000588885 HADHAP40939 763 aa11.29□□□□□ -0.6
RFX1-204ENST00000588885 ITGA8P53708 1063 aa11.29□□□□□ -0.6
RFX1-204ENST00000588885 SH3BP2P78314 561 aa11.29□□□□□ -0.6
RFX1-204ENST00000588885 DMPKQ09013 629 aa11.29□□□□□ -0.6
RFX1-204ENST00000588885 CUL1Q13616 776 aa11.29□□□□□ -0.6
RFX1-204ENST00000588885 LY6DQ14210 128 aa11.29□□□□□ -0.6
RFX1-204ENST00000588885 KRT33BQ14525 404 aa11.29□□□□□ -0.6
RFX1-204ENST00000588885 KCNJ11Q14654 390 aa11.29□□□□□ -0.6
RFX1-204ENST00000588885 PLCL1Q15111 1095 aa11.29□□□□□ -0.6
RFX1-204ENST00000588885 RNASEH2BQ5TBB1 312 aaKnown RBP11.29□□□□□ -0.6
RFX1-204ENST00000588885 CACHD1Q5VU97 1274 aa11.29□□□□□ -0.6
RFX1-204ENST00000588885 PPP1R21Q6ZMI0 780 aa11.29□□□□□ -0.6
RFX1-204ENST00000588885 PIANPQ8IYJ0 282 aa11.29□□□□□ -0.6
RFX1-204ENST00000588885 UNC5BQ8IZJ1 945 aa11.29□□□□□ -0.6
RFX1-204ENST00000588885 CACNA2D3Q8IZS8 1091 aa11.29□□□□□ -0.6
RFX1-204ENST00000588885 CLDN19Q8N6F1 224 aa11.29□□□□□ -0.6
RFX1-204ENST00000588885 IL22RA1Q8N6P7 574 aa11.29□□□□□ -0.6
RFX1-204ENST00000588885 OR2L2Q8NH16 312 aa11.29□□□□□ -0.6
RFX1-204ENST00000588885 CPT1BQ92523 772 aa11.29□□□□□ -0.6
RFX1-204ENST00000588885 NKD1Q969G9 470 aa11.29□□□□□ -0.6
RFX1-204ENST00000588885 CDKN2AIPNLQ96HQ2 116 aa11.29□□□□□ -0.6
RFX1-204ENST00000588885 ZNF514Q96K75 400 aaPredicted RBP11.29□□□□□ -0.6
RFX1-204ENST00000588885 C12orf66Q96MD2 445 aa11.29□□□□□ -0.6
RFX1-204ENST00000588885 DDA1Q9BW61 102 aa11.29□□□□□ -0.6
RFX1-204ENST00000588885 ASPSCR1Q9BZE9 553 aa11.29□□□□□ -0.6
RFX1-204ENST00000588885 RAB6BQ9NRW1 208 aa11.29□□□□□ -0.6
RFX1-204ENST00000588885 NLE1Q9NVX2 485 aaPredicted RBP11.29□□□□□ -0.6
RFX1-204ENST00000588885 WHRNQ9P202 907 aa11.29□□□□□ -0.6
RFX1-204ENST00000588885 NFU1Q9UMS0 254 aa11.29□□□□□ -0.6
RFX1-204ENST00000588885 PCDHGA3Q9Y5H0 932 aa11.29□□□□□ -0.6
RFX1-204ENST00000588885 CFAP99D6REC4 459 aa11.28□□□□□ -0.6
RFX1-204ENST00000588885 POLR1CO15160 346 aaPredicted RBP11.28□□□□□ -0.6
RFX1-204ENST00000588885 RAD1O60671 282 aa11.28□□□□□ -0.6
RFX1-204ENST00000588885 C1QL1O75973 258 aa11.28□□□□□ -0.6
RFX1-204ENST00000588885 C9P02748 559 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms