RNA–Protein interactions for RNA: ENST00000588230.5

CIRBP-217, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5 BASIC

Gene CIRBP, Length 1,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-217ENST00000588230 PCDHGA7Q9Y5G6 932 aa18.75■□□□□ 0.59
CIRBP-217ENST00000588230 CCDC188H7C350 402 aa18.74■□□□□ 0.59
CIRBP-217ENST00000588230 LIN7AO14910 233 aaPredicted RBP18.74■□□□□ 0.59
CIRBP-217ENST00000588230 FANCGO15287 622 aa18.74■□□□□ 0.59
CIRBP-217ENST00000588230 NDUFS3O75489 264 aa18.74■□□□□ 0.59
CIRBP-217ENST00000588230 CCL4P13236 92 aa18.74■□□□□ 0.59
CIRBP-217ENST00000588230 NDUFS1P28331 727 aa18.74■□□□□ 0.59
CIRBP-217ENST00000588230 PDHA2P29803 388 aa18.74■□□□□ 0.59
CIRBP-217ENST00000588230 CASQ1P31415 396 aa18.74■□□□□ 0.59
CIRBP-217ENST00000588230 SLC5A2P31639 672 aa18.74■□□□□ 0.59
CIRBP-217ENST00000588230 ETV5P41161 510 aa18.74■□□□□ 0.59
CIRBP-217ENST00000588230 CAPZBP47756 277 aa18.74■□□□□ 0.59
CIRBP-217ENST00000588230 CD151P48509 253 aa18.74■□□□□ 0.59
CIRBP-217ENST00000588230 DR1Q01658 176 aa18.74■□□□□ 0.59
CIRBP-217ENST00000588230 ZNF658BQ4V348 819 aaPredicted RBP18.74■□□□□ 0.59
CIRBP-217ENST00000588230 RNASEH2BQ5TBB1 312 aaKnown RBP18.74■□□□□ 0.59
CIRBP-217ENST00000588230 TMEM164Q5U3C3 297 aa18.74■□□□□ 0.59
CIRBP-217ENST00000588230 MRNIPQ6NTE8 343 aa18.74■□□□□ 0.59
CIRBP-217ENST00000588230 SYDE1Q6ZW31 735 aaPredicted RBP18.74■□□□□ 0.59
CIRBP-217ENST00000588230 ARHGAP22Q7Z5H3 698 aa18.74■□□□□ 0.59
CIRBP-217ENST00000588230 PCGF5Q86SE9 256 aa18.74■□□□□ 0.59
CIRBP-217ENST00000588230 JPH3Q8WXH2 748 aaPredicted RBP18.74■□□□□ 0.59
CIRBP-217ENST00000588230 RSC1A1Q92681 617 aa18.74■□□□□ 0.59
CIRBP-217ENST00000588230 USP7Q93009 1102 aa18.74■□□□□ 0.59
CIRBP-217ENST00000588230 TGM7Q96PF1 710 aa18.74■□□□□ 0.59
CIRBP-217ENST00000588230 FERD3LQ96RJ6 166 aa18.74■□□□□ 0.59
CIRBP-217ENST00000588230 TSSK1BQ9BXA7 367 aa18.74■□□□□ 0.59
CIRBP-217ENST00000588230 OR52A5Q9H2C5 316 aa18.74■□□□□ 0.59
CIRBP-217ENST00000588230 ACSL6Q9UKU0 697 aa18.74■□□□□ 0.59
CIRBP-217ENST00000588230 MAD1L1Q9Y6D9 718 aa18.74■□□□□ 0.59
CIRBP-217ENST00000588230 MN1Q10571 1320 aaPredicted RBP18.74■□□□□ 0.59
CIRBP-217ENST00000588230 FAM237BA0A1B0GVD1 139 aa18.73■□□□□ 0.59
CIRBP-217ENST00000588230 DNALI1O14645 258 aaPredicted RBP18.73■□□□□ 0.59
CIRBP-217ENST00000588230 PRMT5O14744 637 aaPredicted RBP18.73■□□□□ 0.59
CIRBP-217ENST00000588230 NVLO15381 856 aaKnown RBP18.73■□□□□ 0.59
CIRBP-217ENST00000588230 CAPN5O15484 640 aaPredicted RBP18.73■□□□□ 0.59
CIRBP-217ENST00000588230 C9P02748 559 aa18.73■□□□□ 0.59
CIRBP-217ENST00000588230 FGF3P11487 239 aaPredicted RBP18.73■□□□□ 0.59
CIRBP-217ENST00000588230 ARNTP27540 789 aa18.73■□□□□ 0.59
CIRBP-217ENST00000588230 GFERP55789 205 aa18.73■□□□□ 0.59
CIRBP-217ENST00000588230 ETF1P62495 437 aaKnown RBP18.73■□□□□ 0.59
CIRBP-217ENST00000588230 PLOD1Q02809 727 aaPredicted RBP18.73■□□□□ 0.59
CIRBP-217ENST00000588230 BOP1Q14137 746 aaKnown RBP18.73■□□□□ 0.59
CIRBP-217ENST00000588230 BRD3Q15059 726 aa18.73■□□□□ 0.59
CIRBP-217ENST00000588230 SYTL3Q4VX76 610 aa18.73■□□□□ 0.59
CIRBP-217ENST00000588230 KIAA0930Q6ICG6 404 aaPredicted RBP18.73■□□□□ 0.59
CIRBP-217ENST00000588230 FAM129CQ86XR2 697 aa18.73■□□□□ 0.59
CIRBP-217ENST00000588230 ZNF669Q96BR6 464 aaPredicted RBP18.73■□□□□ 0.59
CIRBP-217ENST00000588230 ZDHHC12Q96GR4 267 aa18.73■□□□□ 0.59
CIRBP-217ENST00000588230 C9orf72Q96LT7 481 aa18.73■□□□□ 0.59
CIRBP-217ENST00000588230 FCRL3Q96P31 734 aaPredicted RBP18.73■□□□□ 0.59
CIRBP-217ENST00000588230 DPH1Q9BZG8 443 aa18.73■□□□□ 0.59
CIRBP-217ENST00000588230 KIR3DX1Q9H7L2 352 aa18.73■□□□□ 0.59
CIRBP-217ENST00000588230 SLC24A2Q9UI40 661 aa18.73■□□□□ 0.59
CIRBP-217ENST00000588230 EFCAB7A8K855 629 aa18.72■□□□□ 0.59
CIRBP-217ENST00000588230 GOLGA8KD6RF30 607 aa18.72■□□□□ 0.59
CIRBP-217ENST00000588230 GOLGA8TH3BQL2 631 aa18.72■□□□□ 0.59
CIRBP-217ENST00000588230 PFDN6O15212 129 aa18.72■□□□□ 0.59
CIRBP-217ENST00000588230 ITGB6P18564 788 aa18.72■□□□□ 0.59
CIRBP-217ENST00000588230 CLN3Q13286 438 aa18.72■□□□□ 0.59
CIRBP-217ENST00000588230 DHX34Q14147 1143 aaKnown RBP18.72■□□□□ 0.59
CIRBP-217ENST00000588230 ANKRD20A4Q4UJ75 823 aa18.72■□□□□ 0.59
CIRBP-217ENST00000588230 IZUMO3Q5VZ72 239 aa18.72■□□□□ 0.59
CIRBP-217ENST00000588230 PTRHD1Q6GMV3 140 aaKnown RBP18.72■□□□□ 0.59
CIRBP-217ENST00000588230 IRGCQ6NXR0 463 aa18.72■□□□□ 0.59
CIRBP-217ENST00000588230 TFGQ92734 400 aaPredicted RBP18.72■□□□□ 0.59
CIRBP-217ENST00000588230 CARD6Q9BX69 1037 aa18.72■□□□□ 0.59
CIRBP-217ENST00000588230 MVB12BQ9H7P6 319 aa18.72■□□□□ 0.59
CIRBP-217ENST00000588230 EPHA6Q9UF33 1036 aa18.72■□□□□ 0.59
CIRBP-217ENST00000588230 RPS6KL1Q9Y6S9 549 aa18.72■□□□□ 0.59
CIRBP-217ENST00000588230 UBA6A0AVT1 1052 aaPredicted RBP18.71■□□□□ 0.59
CIRBP-217ENST00000588230 KLK10O43240 276 aa18.71■□□□□ 0.59
CIRBP-217ENST00000588230 PRAMEF10O60809 474 aa18.71■□□□□ 0.59
CIRBP-217ENST00000588230 RASSF9O75901 435 aa18.71■□□□□ 0.59
CIRBP-217ENST00000588230 MAGEA3P43357 314 aa18.71■□□□□ 0.59
CIRBP-217ENST00000588230 LEPRP48357 1165 aaKnown RBP18.71■□□□□ 0.59
CIRBP-217ENST00000588230 ARCN1P48444 511 aaKnown RBP18.71■□□□□ 0.59
CIRBP-217ENST00000588230 NEPROQ6NW34 567 aa18.71■□□□□ 0.59
CIRBP-217ENST00000588230 ARMC6Q6NXE6 501 aa18.71■□□□□ 0.59
CIRBP-217ENST00000588230 NAPRTQ6XQN6 538 aa18.71■□□□□ 0.59
CIRBP-217ENST00000588230 SYT10Q6XYQ8 523 aa18.71■□□□□ 0.59
CIRBP-217ENST00000588230 HOOK3Q86VS8 718 aa18.71■□□□□ 0.59
CIRBP-217ENST00000588230 LRRC6Q86X45 466 aa18.71■□□□□ 0.59
CIRBP-217ENST00000588230 PHC3Q8NDX5 983 aa18.71■□□□□ 0.59
CIRBP-217ENST00000588230 ACVR1CQ8NER5 493 aa18.71■□□□□ 0.59
CIRBP-217ENST00000588230 ART4Q93070 314 aa18.71■□□□□ 0.59
CIRBP-217ENST00000588230 SIGLEC10Q96LC7 697 aa18.71■□□□□ 0.59
CIRBP-217ENST00000588230 TAAR9Q96RI9 348 aa18.71■□□□□ 0.59
CIRBP-217ENST00000588230 TCF12Q99081 682 aa18.71■□□□□ 0.59
CIRBP-217ENST00000588230 TRIM56Q9BRZ2 755 aaKnown RBP18.71■□□□□ 0.59
CIRBP-217ENST00000588230 B3GNT4Q9C0J1 378 aa18.71■□□□□ 0.59
CIRBP-217ENST00000588230 RAB33BQ9H082 229 aa18.71■□□□□ 0.59
CIRBP-217ENST00000588230 HRASLS2Q9NWW9 162 aa18.71■□□□□ 0.59
CIRBP-217ENST00000588230 OCIAD1Q9NX40 245 aa18.71■□□□□ 0.59
CIRBP-217ENST00000588230 SLC39A1Q9NY26 324 aa18.71■□□□□ 0.59
CIRBP-217ENST00000588230 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.71■□□□□ 0.59
CIRBP-217ENST00000588230 GNPTGQ9UJJ9 305 aa18.71■□□□□ 0.59
CIRBP-217ENST00000588230 CFAP46Q8IYW2 2715 aa18.7■□□□□ 0.58
CIRBP-217ENST00000588230 SLC5A10A0PJK1 596 aa18.7■□□□□ 0.58
CIRBP-217ENST00000588230 B4E171 279 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms