RNA–Protein interactions for RNA: ENST00000588030.5

CIRBP-215, Transcript of cold inducible RNA binding protein, humanhuman

APPRIS P3 TSL 5 BASIC

Gene CIRBP, Length 1,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-215ENST00000588030 KRT33BQ14525 404 aa19.34■□□□□ 0.69
CIRBP-215ENST00000588030 PLCL1Q15111 1095 aa19.34■□□□□ 0.69
CIRBP-215ENST00000588030 ANKRD20A4Q4UJ75 823 aa19.34■□□□□ 0.69
CIRBP-215ENST00000588030 SYTL3Q4VX76 610 aa19.34■□□□□ 0.69
CIRBP-215ENST00000588030 OR4D9Q8NGE8 314 aa19.34■□□□□ 0.69
CIRBP-215ENST00000588030 CMKLR1Q99788 373 aa19.34■□□□□ 0.69
CIRBP-215ENST00000588030 DPH1Q9BZG8 443 aa19.34■□□□□ 0.69
CIRBP-215ENST00000588030 FAM237BA0A1B0GVD1 139 aa19.33■□□□□ 0.68
CIRBP-215ENST00000588030 UBA6A0AVT1 1052 aaPredicted RBP19.33■□□□□ 0.68
CIRBP-215ENST00000588030 MAGEB16A2A368 324 aa19.33■□□□□ 0.68
CIRBP-215ENST00000588030 IQCF5A8MTL0 148 aa19.33■□□□□ 0.68
CIRBP-215ENST00000588030 KLK10O43240 276 aa19.33■□□□□ 0.68
CIRBP-215ENST00000588030 IVDP26440 423 aa19.33■□□□□ 0.68
CIRBP-215ENST00000588030 MAGEA3P43357 314 aa19.33■□□□□ 0.68
CIRBP-215ENST00000588030 KIAA0930Q6ICG6 404 aaPredicted RBP19.33■□□□□ 0.68
CIRBP-215ENST00000588030 MRNIPQ6NTE8 343 aa19.33■□□□□ 0.68
CIRBP-215ENST00000588030 TMEM71Q6P5X7 295 aa19.33■□□□□ 0.68
CIRBP-215ENST00000588030 ZNF449Q6P9G9 518 aa19.33■□□□□ 0.68
CIRBP-215ENST00000588030 HOOK3Q86VS8 718 aa19.33■□□□□ 0.68
CIRBP-215ENST00000588030 STAMBPL1Q96FJ0 436 aa19.33■□□□□ 0.68
CIRBP-215ENST00000588030 PWWP2AQ96N64 755 aa19.33■□□□□ 0.68
CIRBP-215ENST00000588030 PDP2Q9P2J9 529 aa19.33■□□□□ 0.68
CIRBP-215ENST00000588030 EFCAB8A8MWE9 144 aa19.32■□□□□ 0.68
CIRBP-215ENST00000588030 IFRD1O00458 451 aaPredicted RBP19.32■□□□□ 0.68
CIRBP-215ENST00000588030 NVLO15381 856 aaKnown RBP19.32■□□□□ 0.68
CIRBP-215ENST00000588030 F7P08709 466 aaPredicted RBP19.32■□□□□ 0.68
CIRBP-215ENST00000588030 CCL4P13236 92 aa19.32■□□□□ 0.68
CIRBP-215ENST00000588030 ARCN1P48444 511 aaKnown RBP19.32■□□□□ 0.68
CIRBP-215ENST00000588030 ITGA8P53708 1063 aa19.32■□□□□ 0.68
CIRBP-215ENST00000588030 EIF3BP55884 814 aaKnown RBP19.32■□□□□ 0.68
CIRBP-215ENST00000588030 DHX9Q08211 1270 aaKnown RBP19.32■□□□□ 0.68
CIRBP-215ENST00000588030 BBS9Q3SYG4 887 aa19.32■□□□□ 0.68
CIRBP-215ENST00000588030 HP1BP3Q5SSJ5 553 aaPredicted RBP19.32■□□□□ 0.68
CIRBP-215ENST00000588030 PTRHD1Q6GMV3 140 aaKnown RBP19.32■□□□□ 0.68
CIRBP-215ENST00000588030 SDCCAG8Q86SQ7 713 aaPredicted RBP19.32■□□□□ 0.68
CIRBP-215ENST00000588030 RBM12BQ8IXT5 1001 aaKnown RBP19.32■□□□□ 0.68
CIRBP-215ENST00000588030 KRT222Q8N1A0 295 aa19.32■□□□□ 0.68
CIRBP-215ENST00000588030 LKAAEAR1Q8TD35 194 aa19.32■□□□□ 0.68
CIRBP-215ENST00000588030 RSC1A1Q92681 617 aa19.32■□□□□ 0.68
CIRBP-215ENST00000588030 SIGLEC10Q96LC7 697 aa19.32■□□□□ 0.68
CIRBP-215ENST00000588030 DPYSL5Q9BPU6 564 aa19.32■□□□□ 0.68
CIRBP-215ENST00000588030 UCK1Q9HA47 277 aa19.32■□□□□ 0.68
CIRBP-215ENST00000588030 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.32■□□□□ 0.68
CIRBP-215ENST00000588030 AHCTF1Q8WYP5 2266 aa19.31■□□□□ 0.68
CIRBP-215ENST00000588030 F8W8V4 182 aa19.31■□□□□ 0.68
CIRBP-215ENST00000588030 PRMT5O14744 637 aaPredicted RBP19.31■□□□□ 0.68
CIRBP-215ENST00000588030 URI1O94763 535 aaPredicted RBP19.31■□□□□ 0.68
CIRBP-215ENST00000588030 THRAP10827 490 aa19.31■□□□□ 0.68
CIRBP-215ENST00000588030 GFERP55789 205 aa19.31■□□□□ 0.68
CIRBP-215ENST00000588030 TRA2AQ13595 282 aaKnown RBP eCLIP19.31■□□□□ 0.68
CIRBP-215ENST00000588030 THOC5Q13769 683 aaKnown RBP19.31■□□□□ 0.68
CIRBP-215ENST00000588030 ZNF658BQ4V348 819 aaPredicted RBP19.31■□□□□ 0.68
CIRBP-215ENST00000588030 MSS51Q4VC12 460 aa19.31■□□□□ 0.68
CIRBP-215ENST00000588030 DNAJC21Q5F1R6 531 aaKnown RBP19.31■□□□□ 0.68
CIRBP-215ENST00000588030 CAPRIN2Q6IMN6 1127 aaKnown RBP19.31■□□□□ 0.68
CIRBP-215ENST00000588030 NEPROQ6NW34 567 aa19.31■□□□□ 0.68
CIRBP-215ENST00000588030 PHC3Q8NDX5 983 aa19.31■□□□□ 0.68
CIRBP-215ENST00000588030 USP7Q93009 1102 aa19.31■□□□□ 0.68
CIRBP-215ENST00000588030 SNF8Q96H20 258 aa19.31■□□□□ 0.68
CIRBP-215ENST00000588030 TGM7Q96PF1 710 aa19.31■□□□□ 0.68
CIRBP-215ENST00000588030 FERD3LQ96RJ6 166 aa19.31■□□□□ 0.68
CIRBP-215ENST00000588030 OR52A5Q9H2C5 316 aa19.31■□□□□ 0.68
CIRBP-215ENST00000588030 OGFRQ9NZT2 677 aa19.31■□□□□ 0.68
CIRBP-215ENST00000588030 AKAP7Q9P0M2 348 aaPredicted RBP19.31■□□□□ 0.68
CIRBP-215ENST00000588030 ACSL6Q9UKU0 697 aa19.31■□□□□ 0.68
CIRBP-215ENST00000588030 SNX24Q9Y343 169 aa19.31■□□□□ 0.68
CIRBP-215ENST00000588030 ZCWPW2A0A1B0GU75 182 aa19.3■□□□□ 0.68
CIRBP-215ENST00000588030 LIN7AO14910 233 aaPredicted RBP19.3■□□□□ 0.68
CIRBP-215ENST00000588030 HGSO14964 777 aaPredicted RBP19.3■□□□□ 0.68
CIRBP-215ENST00000588030 GSTM1P09488 218 aa19.3■□□□□ 0.68
CIRBP-215ENST00000588030 MAPK10P53779 464 aa19.3■□□□□ 0.68
CIRBP-215ENST00000588030 GSTM4Q03013 218 aa19.3■□□□□ 0.68
CIRBP-215ENST00000588030 CLN3Q13286 438 aa19.3■□□□□ 0.68
CIRBP-215ENST00000588030 MORF4L2Q15014 288 aa19.3■□□□□ 0.68
CIRBP-215ENST00000588030 SOWAHCQ53LP3 525 aaPredicted RBP19.3■□□□□ 0.68
CIRBP-215ENST00000588030 ZNF470Q6ECI4 717 aa19.3■□□□□ 0.68
CIRBP-215ENST00000588030 WDR74Q6RFH5 385 aaPredicted RBP19.3■□□□□ 0.68
CIRBP-215ENST00000588030 TMEM135Q86UB9 458 aa19.3■□□□□ 0.68
CIRBP-215ENST00000588030 TSSK1BQ9BXA7 367 aa19.3■□□□□ 0.68
CIRBP-215ENST00000588030 EPB41L1Q9H4G0 881 aa19.3■□□□□ 0.68
CIRBP-215ENST00000588030 C20orf96Q9NUD7 363 aaPredicted RBP19.3■□□□□ 0.68
CIRBP-215ENST00000588030 GNPTGQ9UJJ9 305 aa19.3■□□□□ 0.68
CIRBP-215ENST00000588030 CRYL1Q9Y2S2 319 aa19.3■□□□□ 0.68
CIRBP-215ENST00000588030 COLEC10Q9Y6Z7 277 aa19.3■□□□□ 0.68
CIRBP-215ENST00000588030 C9orf172C9J069 976 aa19.3■□□□□ 0.68
CIRBP-215ENST00000588030 RAD51CO43502 376 aa19.3■□□□□ 0.68
CIRBP-215ENST00000588030 PRAMEF10O60809 474 aa19.3■□□□□ 0.68
CIRBP-215ENST00000588030 USP1O94782 785 aa19.3■□□□□ 0.68
CIRBP-215ENST00000588030 SEC31AO94979 1220 aaKnown RBP19.3■□□□□ 0.68
CIRBP-215ENST00000588030 FGF3P11487 239 aaPredicted RBP19.3■□□□□ 0.68
CIRBP-215ENST00000588030 FMO4P31512 558 aa19.3■□□□□ 0.68
CIRBP-215ENST00000588030 CCR7P32248 378 aa19.3■□□□□ 0.68
CIRBP-215ENST00000588030 HSPA14Q0VDF9 509 aa19.3■□□□□ 0.68
CIRBP-215ENST00000588030 RPA4Q13156 261 aa19.3■□□□□ 0.68
CIRBP-215ENST00000588030 LONRF1Q17RB8 773 aa19.3■□□□□ 0.68
CIRBP-215ENST00000588030 BROXQ5VW32 411 aa19.3■□□□□ 0.68
CIRBP-215ENST00000588030 ARMC3Q5W041 872 aa19.3■□□□□ 0.68
CIRBP-215ENST00000588030 HIBCHQ6NVY1 386 aaPredicted RBP19.3■□□□□ 0.68
CIRBP-215ENST00000588030 IRGCQ6NXR0 463 aa19.3■□□□□ 0.68
CIRBP-215ENST00000588030 PLXDC1Q8IUK5 500 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms