RNA–Protein interactions for RNA: ENST00000587774.1

TRIM47-205, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 720 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-205ENST00000587774 PADI1Q9ULC6 663 aa18.3■□□□□ 0.52
TRIM47-205ENST00000587774 PCDHGA6Q9Y5G7 932 aa18.3■□□□□ 0.52
TRIM47-205ENST00000587774 NAV2Q8IVL1 2488 aa18.29■□□□□ 0.52
TRIM47-205ENST00000587774 IGLV3-16A0A075B6K0 115 aa18.29■□□□□ 0.52
TRIM47-205ENST00000587774 NTRK1P04629 796 aa18.29■□□□□ 0.52
TRIM47-205ENST00000587774 PRSS56P0CW18 603 aa18.29■□□□□ 0.52
TRIM47-205ENST00000587774 ATP1B2P14415 290 aaPredicted RBP18.29■□□□□ 0.52
TRIM47-205ENST00000587774 ARL4DP49703 201 aa18.29■□□□□ 0.52
TRIM47-205ENST00000587774 CDKN1CP49918 316 aaPredicted RBP18.29■□□□□ 0.52
TRIM47-205ENST00000587774 KPNA2P52292 529 aaKnown RBP18.29■□□□□ 0.52
TRIM47-205ENST00000587774 SEPT6Q14141 434 aa18.29■□□□□ 0.52
TRIM47-205ENST00000587774 GSE1Q14687 1217 aa18.29■□□□□ 0.52
TRIM47-205ENST00000587774 GPR19Q15760 415 aa18.29■□□□□ 0.52
TRIM47-205ENST00000587774 FBXO38Q6PIJ6 1188 aa18.29■□□□□ 0.52
TRIM47-205ENST00000587774 ARHGEF18Q6ZSZ5 1173 aa18.29■□□□□ 0.52
TRIM47-205ENST00000587774 TMEM135Q86UB9 458 aa18.29■□□□□ 0.52
TRIM47-205ENST00000587774 D2HGDHQ8N465 521 aa18.29■□□□□ 0.52
TRIM47-205ENST00000587774 LRRC45Q96CN5 670 aa18.29■□□□□ 0.52
TRIM47-205ENST00000587774 FCRL4Q96PJ5 515 aa18.29■□□□□ 0.52
TRIM47-205ENST00000587774 RUFY1Q96T51 708 aa18.29■□□□□ 0.52
TRIM47-205ENST00000587774 COG4Q9H9E3 785 aa18.29■□□□□ 0.52
TRIM47-205ENST00000587774 AKIRIN1Q9H9L7 192 aaPredicted RBP18.29■□□□□ 0.52
TRIM47-205ENST00000587774 AMFRQ9UKV5 643 aa18.29■□□□□ 0.52
TRIM47-205ENST00000587774 POLHQ9Y253 713 aa18.29■□□□□ 0.52
TRIM47-205ENST00000587774 SHANK1Q9Y566 2161 aa18.28■□□□□ 0.52
TRIM47-205ENST00000587774 TRBV5-4A0A0C4DH59 114 aa18.28■□□□□ 0.52
TRIM47-205ENST00000587774 A0A0U1RQJ8 604 aa18.28■□□□□ 0.52
TRIM47-205ENST00000587774 CDC14CA4D256 554 aa18.28■□□□□ 0.52
TRIM47-205ENST00000587774 C21orf140B9A014 251 aa18.28■□□□□ 0.52
TRIM47-205ENST00000587774 CFAP99D6REC4 459 aa18.28■□□□□ 0.52
TRIM47-205ENST00000587774 CREG1O75629 220 aa18.28■□□□□ 0.52
TRIM47-205ENST00000587774 ZNF189O75820 626 aaPredicted RBP18.28■□□□□ 0.52
TRIM47-205ENST00000587774 METTL18O95568 372 aa18.28■□□□□ 0.52
TRIM47-205ENST00000587774 ZBTB11O95625 1053 aaPredicted RBP18.28■□□□□ 0.52
TRIM47-205ENST00000587774 PTMAP06454 111 aaKnown RBP18.28■□□□□ 0.52
TRIM47-205ENST00000587774 ACRV1P26436 265 aa18.28■□□□□ 0.52
TRIM47-205ENST00000587774 GDF10P55107 478 aa18.28■□□□□ 0.52
TRIM47-205ENST00000587774 KLF1Q13351 362 aaPredicted RBP18.28■□□□□ 0.52
TRIM47-205ENST00000587774 GPR33Q49SQ1 333 aa18.28■□□□□ 0.52
TRIM47-205ENST00000587774 LACTB2Q53H82 288 aaPredicted RBP18.28■□□□□ 0.52
TRIM47-205ENST00000587774 ARMC6Q6NXE6 501 aa18.28■□□□□ 0.52
TRIM47-205ENST00000587774 PEX26Q7Z412 305 aa18.28■□□□□ 0.52
TRIM47-205ENST00000587774 TMEM139Q8IV31 216 aa18.28■□□□□ 0.52
TRIM47-205ENST00000587774 FAM71DQ8N9W8 422 aa18.28■□□□□ 0.52
TRIM47-205ENST00000587774 CCM2Q9BSQ5 444 aa18.28■□□□□ 0.52
TRIM47-205ENST00000587774 ACTL8Q9H568 366 aa18.28■□□□□ 0.52
TRIM47-205ENST00000587774 SOHLH2Q9NX45 425 aa18.28■□□□□ 0.52
TRIM47-205ENST00000587774 ZDHHC3Q9NYG2 299 aa18.28■□□□□ 0.52
TRIM47-205ENST00000587774 ANAPC2Q9UJX6 822 aa18.28■□□□□ 0.52
TRIM47-205ENST00000587774 POMT2Q9UKY4 750 aa18.28■□□□□ 0.52
TRIM47-205ENST00000587774 TP53TG5Q9Y2B4 290 aa18.28■□□□□ 0.52
TRIM47-205ENST00000587774 R3HDM2Q9Y2K5 976 aaKnown RBP18.28■□□□□ 0.52
TRIM47-205ENST00000587774 HEBP2Q9Y5Z4 205 aa18.28■□□□□ 0.52
TRIM47-205ENST00000587774 COLEC10Q9Y6Z7 277 aa18.28■□□□□ 0.52
TRIM47-205ENST00000587774 PCSK5Q92824 1860 aa18.28■□□□□ 0.52
TRIM47-205ENST00000587774 C17orf113A0A1B0GUU1 675 aa18.27■□□□□ 0.52
TRIM47-205ENST00000587774 GOLGA6L9A6NEM1 432 aa18.27■□□□□ 0.52
TRIM47-205ENST00000587774 H7C0S8 307 aa18.27■□□□□ 0.52
TRIM47-205ENST00000587774 SCRG1O75711 98 aa18.27■□□□□ 0.52
TRIM47-205ENST00000587774 FTCDO95954 541 aa18.27■□□□□ 0.52
TRIM47-205ENST00000587774 TPH1P17752 444 aa18.27■□□□□ 0.52
TRIM47-205ENST00000587774 POLR2CP19387 275 aaPredicted RBP18.27■□□□□ 0.52
TRIM47-205ENST00000587774 NR1D1P20393 614 aa18.27■□□□□ 0.52
TRIM47-205ENST00000587774 NDUFS1P28331 727 aa18.27■□□□□ 0.52
TRIM47-205ENST00000587774 CASRP41180 1078 aa18.27■□□□□ 0.52
TRIM47-205ENST00000587774 TUBB4BP68371 445 aa18.27■□□□□ 0.52
TRIM47-205ENST00000587774 TUBB2AQ13885 445 aa18.27■□□□□ 0.52
TRIM47-205ENST00000587774 KRT33BQ14525 404 aa18.27■□□□□ 0.52
TRIM47-205ENST00000587774 POU6F1Q14863 301 aa18.27■□□□□ 0.52
TRIM47-205ENST00000587774 PARP6Q2NL67 630 aa18.27■□□□□ 0.52
TRIM47-205ENST00000587774 ZNF658BQ4V348 819 aaPredicted RBP18.27■□□□□ 0.52
TRIM47-205ENST00000587774 ZRANB3Q5FWF4 1079 aa18.27■□□□□ 0.52
TRIM47-205ENST00000587774 FAM199XQ6PEV8 388 aaPredicted RBP18.27■□□□□ 0.52
TRIM47-205ENST00000587774 BPHLQ86WA6 291 aaPredicted RBP18.27■□□□□ 0.52
TRIM47-205ENST00000587774 SERPINA9Q86WD7 417 aa18.27■□□□□ 0.52
TRIM47-205ENST00000587774 CARFQ8N187 725 aa18.27■□□□□ 0.52
TRIM47-205ENST00000587774 UBL4BQ8N7F7 174 aa18.27■□□□□ 0.52
TRIM47-205ENST00000587774 TTC13Q8NBP0 860 aa18.27■□□□□ 0.52
TRIM47-205ENST00000587774 ACVR1CQ8NER5 493 aa18.27■□□□□ 0.52
TRIM47-205ENST00000587774 OR4E2Q8NGC2 313 aa18.27■□□□□ 0.52
TRIM47-205ENST00000587774 HEXDCQ8WVB3 486 aa18.27■□□□□ 0.52
TRIM47-205ENST00000587774 ZNF501Q96CX3 271 aaPredicted RBP18.27■□□□□ 0.52
TRIM47-205ENST00000587774 BAG1Q99933 345 aaPredicted RBP18.27■□□□□ 0.52
TRIM47-205ENST00000587774 TUBB2BQ9BVA1 445 aa18.27■□□□□ 0.52
TRIM47-205ENST00000587774 TLR10Q9BXR5 811 aa18.27■□□□□ 0.52
TRIM47-205ENST00000587774 TWSG1Q9GZX9 223 aa18.27■□□□□ 0.52
TRIM47-205ENST00000587774 OR52A5Q9H2C5 316 aa18.27■□□□□ 0.52
TRIM47-205ENST00000587774 LRRC40Q9H9A6 602 aa18.27■□□□□ 0.52
TRIM47-205ENST00000587774 NLE1Q9NVX2 485 aaPredicted RBP18.27■□□□□ 0.52
TRIM47-205ENST00000587774 PIH1D1Q9NWS0 290 aaKnown RBP18.27■□□□□ 0.52
TRIM47-205ENST00000587774 BTRCQ9Y297 605 aa18.27■□□□□ 0.52
TRIM47-205ENST00000587774 DOCK10Q96BY6 2186 aa18.26■□□□□ 0.51
TRIM47-205ENST00000587774 TCRBV7S2A1N4TA0A589 114 aa18.26■□□□□ 0.51
TRIM47-205ENST00000587774 PIPSLA2A3N6 862 aa18.26■□□□□ 0.51
TRIM47-205ENST00000587774 MIF4GDA9UHW6 222 aaKnown RBP18.26■□□□□ 0.51
TRIM47-205ENST00000587774 DDX3YO15523 660 aaKnown RBP18.26■□□□□ 0.51
TRIM47-205ENST00000587774 CPNE3O75131 537 aaKnown RBP18.26■□□□□ 0.51
TRIM47-205ENST00000587774 RPS18P62269 152 aaKnown RBP18.26■□□□□ 0.51
TRIM47-205ENST00000587774 PRKAA1Q13131 559 aa18.26■□□□□ 0.51
TRIM47-205ENST00000587774 P3H1Q32P28 736 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms