RNA–Protein interactions for RNA: ENST00000585437.1

ATG4D-202, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-202ENST00000585437 TMBIM4Q9HC24 238 aa8.46□□□□□ -1.06
ATG4D-202ENST00000585437 ZDHHC3Q9NYG2 299 aa8.46□□□□□ -1.06
ATG4D-202ENST00000585437 TMEM9Q9P0T7 183 aa8.46□□□□□ -1.06
ATG4D-202ENST00000585437 TCAF1Q9Y4C2 921 aa8.46□□□□□ -1.06
ATG4D-202ENST00000585437 LOXL2Q9Y4K0 774 aa8.46□□□□□ -1.06
ATG4D-202ENST00000585437 SLC30A1Q9Y6M5 507 aa8.46□□□□□ -1.06
ATG4D-202ENST00000585437 MGAQ8IWI9 3026 aa8.46□□□□□ -1.06
ATG4D-202ENST00000585437 TRBV23OR9-2A0A075B6M9 112 aa8.45□□□□□ -1.06
ATG4D-202ENST00000585437 C17orf113A0A1B0GUU1 675 aa8.45□□□□□ -1.06
ATG4D-202ENST00000585437 CCDC162PA2VCL2 907 aa8.45□□□□□ -1.06
ATG4D-202ENST00000585437 MGAT4DA6NG13 374 aa8.45□□□□□ -1.06
ATG4D-202ENST00000585437 OR51F1A6NGY5 319 aa8.45□□□□□ -1.06
ATG4D-202ENST00000585437 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.45□□□□□ -1.06
ATG4D-202ENST00000585437 E7EVH7 732 aa8.45□□□□□ -1.06
ATG4D-202ENST00000585437 NVLO15381 856 aaKnown RBP8.45□□□□□ -1.06
ATG4D-202ENST00000585437 TNFSF15O95150 251 aa8.45□□□□□ -1.06
ATG4D-202ENST00000585437 C9P02748 559 aa8.45□□□□□ -1.06
ATG4D-202ENST00000585437 ANKRD34CP0C6C1 535 aa8.45□□□□□ -1.06
ATG4D-202ENST00000585437 RALBP11234 206 aa8.45□□□□□ -1.06
ATG4D-202ENST00000585437 MTHFD1P11586 935 aaKnown RBP8.45□□□□□ -1.06
ATG4D-202ENST00000585437 HGFP14210 728 aa8.45□□□□□ -1.06
ATG4D-202ENST00000585437 ATP1B2P14415 290 aaPredicted RBP8.45□□□□□ -1.06
ATG4D-202ENST00000585437 ITIH1P19827 911 aa8.45□□□□□ -1.06
ATG4D-202ENST00000585437 NR1D1P20393 614 aa8.45□□□□□ -1.06
ATG4D-202ENST00000585437 ATP5DP30049 168 aa8.45□□□□□ -1.06
ATG4D-202ENST00000585437 ETV5P41161 510 aa8.45□□□□□ -1.06
ATG4D-202ENST00000585437 HALP42357 657 aa8.45□□□□□ -1.06
ATG4D-202ENST00000585437 CAPZBP47756 277 aa8.45□□□□□ -1.06
ATG4D-202ENST00000585437 BASP1P80723 227 aaKnown RBP8.45□□□□□ -1.06
ATG4D-202ENST00000585437 TLE3Q04726 772 aa8.45□□□□□ -1.06
ATG4D-202ENST00000585437 ZNF844Q08AG5 666 aa8.45□□□□□ -1.06
ATG4D-202ENST00000585437 BIRC2Q13490 618 aa8.45□□□□□ -1.06
ATG4D-202ENST00000585437 LAMB3Q13751 1172 aa8.45□□□□□ -1.06
ATG4D-202ENST00000585437 GPR18Q14330 331 aa8.45□□□□□ -1.06
ATG4D-202ENST00000585437 SEPT7Q16181 437 aaKnown RBP8.45□□□□□ -1.06
ATG4D-202ENST00000585437 UAP1Q16222 522 aaPredicted RBP8.45□□□□□ -1.06
ATG4D-202ENST00000585437 RPE65Q16518 533 aa8.45□□□□□ -1.06
ATG4D-202ENST00000585437 DBN1Q16643 649 aa8.45□□□□□ -1.06
ATG4D-202ENST00000585437 SKIDA1Q1XH10 827 aa8.45□□□□□ -1.06
ATG4D-202ENST00000585437 KRT71Q3SY84 523 aa8.45□□□□□ -1.06
ATG4D-202ENST00000585437 ARMC3Q5W041 872 aa8.45□□□□□ -1.06
ATG4D-202ENST00000585437 CAPRIN2Q6IMN6 1127 aaKnown RBP8.45□□□□□ -1.06
ATG4D-202ENST00000585437 PPP1R21Q6ZMI0 780 aa8.45□□□□□ -1.06
ATG4D-202ENST00000585437 USP53Q70EK8 1073 aa8.45□□□□□ -1.06
ATG4D-202ENST00000585437 DET1Q7L5Y6 550 aa8.45□□□□□ -1.06
ATG4D-202ENST00000585437 NLRP9Q7RTR0 991 aa8.45□□□□□ -1.06
ATG4D-202ENST00000585437 ARHGAP22Q7Z5H3 698 aa8.45□□□□□ -1.06
ATG4D-202ENST00000585437 PCGF5Q86SE9 256 aa8.45□□□□□ -1.06
ATG4D-202ENST00000585437 SERPINA9Q86WD7 417 aa8.45□□□□□ -1.06
ATG4D-202ENST00000585437 RELL1Q8IUW5 271 aa8.45□□□□□ -1.06
ATG4D-202ENST00000585437 FBXO39Q8N4B4 442 aa8.45□□□□□ -1.06
ATG4D-202ENST00000585437 BMPERQ8N8U9 685 aa8.45□□□□□ -1.06
ATG4D-202ENST00000585437 DNAAF3Q8N9W5 541 aa8.45□□□□□ -1.06
ATG4D-202ENST00000585437 HM13Q8TCT9 377 aa8.45□□□□□ -1.06
ATG4D-202ENST00000585437 NAT14Q8WUY8 206 aa8.45□□□□□ -1.06
ATG4D-202ENST00000585437 CMKLR1Q99788 373 aa8.45□□□□□ -1.06
ATG4D-202ENST00000585437 TMEM109Q9BVC6 243 aa8.45□□□□□ -1.06
ATG4D-202ENST00000585437 TBC1D10AQ9BXI6 508 aa8.45□□□□□ -1.06
ATG4D-202ENST00000585437 RAB33BQ9H082 229 aa8.45□□□□□ -1.06
ATG4D-202ENST00000585437 FAM96AQ9H5X1 160 aa8.45□□□□□ -1.06
ATG4D-202ENST00000585437 TREX1Q9NSU2 369 aa8.45□□□□□ -1.06
ATG4D-202ENST00000585437 SLC2A6Q9UGQ3 507 aa8.45□□□□□ -1.06
ATG4D-202ENST00000585437 ANAPC5Q9UJX4 755 aa8.45□□□□□ -1.06
ATG4D-202ENST00000585437 ACSL5Q9ULC5 683 aa8.45□□□□□ -1.06
ATG4D-202ENST00000585437 PRAMEF33A0A0G2JMD5 474 aa8.44□□□□□ -1.06
ATG4D-202ENST00000585437 TCRBV7S3A2A0A539 114 aa8.44□□□□□ -1.06
ATG4D-202ENST00000585437 C9orf172C9J069 976 aa8.44□□□□□ -1.06
ATG4D-202ENST00000585437 CFAP99D6REC4 459 aa8.44□□□□□ -1.06
ATG4D-202ENST00000585437 AP3B1O00203 1094 aa8.44□□□□□ -1.06
ATG4D-202ENST00000585437 TOX3O15405 576 aaPredicted RBP8.44□□□□□ -1.06
ATG4D-202ENST00000585437 RIPK2O43353 540 aa8.44□□□□□ -1.06
ATG4D-202ENST00000585437 SHOX2O60902 331 aaPredicted RBP8.44□□□□□ -1.06
ATG4D-202ENST00000585437 TMEM63AO94886 807 aa8.44□□□□□ -1.06
ATG4D-202ENST00000585437 AP2A2O94973 939 aa8.44□□□□□ -1.06
ATG4D-202ENST00000585437 VIPP01282 170 aa8.44□□□□□ -1.06
ATG4D-202ENST00000585437 GSTM1P09488 218 aa8.44□□□□□ -1.06
ATG4D-202ENST00000585437 ITPKBP27987 946 aa8.44□□□□□ -1.06
ATG4D-202ENST00000585437 RBMS1P29558 406 aaKnown RBP8.44□□□□□ -1.06
ATG4D-202ENST00000585437 PBLDP30039 288 aaPredicted RBP8.44□□□□□ -1.06
ATG4D-202ENST00000585437 SLC5A2P31639 672 aa8.44□□□□□ -1.06
ATG4D-202ENST00000585437 NSG1P42857 185 aa8.44□□□□□ -1.06
ATG4D-202ENST00000585437 MAGEA3P43357 314 aa8.44□□□□□ -1.06
ATG4D-202ENST00000585437 ABCG1P45844 678 aa8.44□□□□□ -1.06
ATG4D-202ENST00000585437 ITGA8P53708 1063 aa8.44□□□□□ -1.06
ATG4D-202ENST00000585437 GSTM4Q03013 218 aa8.44□□□□□ -1.06
ATG4D-202ENST00000585437 SEMA3AQ14563 771 aa8.44□□□□□ -1.06
ATG4D-202ENST00000585437 MORF4L2Q15014 288 aa8.44□□□□□ -1.06
ATG4D-202ENST00000585437 COL28A1Q2UY09 1125 aa8.44□□□□□ -1.06
ATG4D-202ENST00000585437 TTMPQ5BVD1 217 aa8.44□□□□□ -1.06
ATG4D-202ENST00000585437 ZRANB3Q5FWF4 1079 aa8.44□□□□□ -1.06
ATG4D-202ENST00000585437 PCID2Q5JVF3 399 aa8.44□□□□□ -1.06
ATG4D-202ENST00000585437 PHF19Q5T6S3 580 aa8.44□□□□□ -1.06
ATG4D-202ENST00000585437 IZUMO3Q5VZ72 239 aa8.44□□□□□ -1.06
ATG4D-202ENST00000585437 LRRC8BQ6P9F7 803 aa8.44□□□□□ -1.06
ATG4D-202ENST00000585437 AFTPHQ6ULP2 937 aa8.44□□□□□ -1.06
ATG4D-202ENST00000585437 SPACA3Q8IXA5 215 aa8.44□□□□□ -1.06
ATG4D-202ENST00000585437 LILRA3Q8N6C8 439 aaPredicted RBP8.44□□□□□ -1.06
ATG4D-202ENST00000585437 CLDN19Q8N6F1 224 aa8.44□□□□□ -1.06
ATG4D-202ENST00000585437 RCBTB1Q8NDN9 531 aa8.44□□□□□ -1.06
ATG4D-202ENST00000585437 PPHLN1Q8NEY8 458 aaKnown RBP8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms