RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 CTIFO43310 598 aaKnown RBP1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 SIX3O95343 332 aaPredicted RBP1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 FGBP02675 491 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 MMP1P03956 469 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 URODP06132 367 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 CHRM4P08173 479 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 CCDC192P0DO97 292 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 ACP5P13686 325 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 GLULP15104 373 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 HOXB9P17482 250 aaPredicted RBP1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 EPHA8P29322 1005 aaPredicted RBP1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 GKP32189 559 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 QARSP47897 775 aaKnown RBP1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 ME1P48163 572 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 CLCN5P51795 746 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 ACLYP53396 1101 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 ARF5P84085 180 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 ID2Q02363 134 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 SPAG1Q07617 926 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 CETN1Q12798 172 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 FHL1Q13642 323 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 RPE65Q16518 533 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 C1QL3Q5VWW1 255 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 DCDC5Q6ZRR9 648 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 RNF144BQ7Z419 303 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 TLK2Q86UE8 772 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 KLBQ86Z14 1044 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 CCDC65Q8IXS2 484 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 NEK11Q8NG66 645 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 CLEC4CQ8WTT0 213 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 SCARB1Q8WTV0 552 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 HDAC11Q96DB2 347 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 HRH4Q9H3N8 390 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 DNAJC18Q9H819 358 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 RANGRFQ9HD47 186 aaPredicted RBP1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 FSCN3Q9NQT6 498 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 SLC6A13Q9NSD5 602 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 ADPRHL2Q9NX46 363 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 AKAP7Q9P0M2 348 aaPredicted RBP1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 WNT16Q9UBV4 365 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 KIAA1257Q9ULG3 409 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 CHKBQ9Y259 395 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 RAP2CQ9Y3L5 183 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 ASB3Q9Y575 518 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 UMODL1Q5DID0 1318 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 FAM237AA0A1B0GTK4 181 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 GTPBP10A4D1E9 387 aaKnown RBP1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 NPIPB15A6NHN6 443 aaPredicted RBP1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 TEX22C9J3V5 150 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 BCL10O95999 233 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 OR52Z1P0C646 297 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 MCF2P10911 925 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 KRT3P12035 628 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 PPP3CBP16298 524 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 CPT2P23786 658 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 MAPK3P27361 379 aaPredicted RBP1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 RPA1P27694 616 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 PCGF2P35227 344 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 HNF1BP35680 557 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 GABRB2P47870 512 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 RAB28P51157 221 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 VCPP55072 806 aaKnown RBP1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 WASHC5Q12768 1159 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 CSTF3Q12996 717 aaKnown RBP1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 MAPK11Q15759 364 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 ZNF528Q3MIS6 628 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 ADALQ6DHV7 355 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 CAVIN1Q6NZI2 390 aaKnown RBP1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 MSANTD2Q6P1R3 559 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 CASC4Q6P4E1 433 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 NAPRTQ6XQN6 538 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 CLEC17AQ6ZS10 378 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 MIER3Q7Z3K6 550 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 GALNT7Q86SF2 657 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 PLA2G4DQ86XP0 818 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 SMRP1Q8NCR6 262 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 GPR150Q8NGU9 434 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 C16orf52Q8NHV5 167 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 UBLCP1Q8WVY7 318 aaPredicted RBP1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 ZNF558Q96NG5 402 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 GTPBP2Q9BX10 602 aaKnown RBP1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 MRPL1Q9BYD6 325 aaKnown RBP1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 TMEM117Q9H0C3 514 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 ABCG8Q9H221 673 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 MUC13Q9H3R2 512 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 THAP9Q9H5L6 903 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 ZNF302Q9NR11 478 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 C20orf141Q9NUB4 165 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 MRPS18AQ9NVS2 196 aaKnown RBP1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 ZNHIT6Q9NWK9 470 aaKnown RBP1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 RNF7Q9UBF6 113 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 GIMAP2Q9UG22 337 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 FBXO4Q9UKT5 387 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 TBX21Q9UL17 535 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 TNFRSF18Q9Y5U5 241 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 MYH6P13533 1939 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 EYSQ5T1H1 3165 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 MUC6Q6W4X9 2439 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 KIF26AQ9ULI4 1882 aaPredicted RBP1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 A8MVJ9 347 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms