RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 OR52K1Q8NGK4 314 aa15.32■□□□□ 0.04
SKA2-209ENST00000583976 CT55Q8WUE5 264 aa15.32■□□□□ 0.04
SKA2-209ENST00000583976 NAT14Q8WUY8 206 aa15.32■□□□□ 0.04
SKA2-209ENST00000583976 KRT12Q99456 494 aa15.32■□□□□ 0.04
SKA2-209ENST00000583976 NEU2Q9Y3R4 380 aa15.32■□□□□ 0.04
SKA2-209ENST00000583976 USP9YO00507 2555 aaPredicted RBP15.32■□□□□ 0.04
SKA2-209ENST00000583976 CDC14CA4D256 554 aa15.31■□□□□ 0.04
SKA2-209ENST00000583976 CLEC18AA5D8T8 446 aa15.31■□□□□ 0.04
SKA2-209ENST00000583976 CCDC188H7C350 402 aa15.31■□□□□ 0.04
SKA2-209ENST00000583976 KATNA1O75449 491 aa15.31■□□□□ 0.04
SKA2-209ENST00000583976 CDK14O94921 469 aa15.31■□□□□ 0.04
SKA2-209ENST00000583976 TUBB4AP04350 444 aa15.31■□□□□ 0.04
SKA2-209ENST00000583976 CTSCP53634 463 aa15.31■□□□□ 0.04
SKA2-209ENST00000583976 C2orf54Q08AI8 447 aa15.31■□□□□ 0.04
SKA2-209ENST00000583976 UBAP2LQ14157 1087 aaKnown RBP15.31■□□□□ 0.04
SKA2-209ENST00000583976 CACHD1Q5VU97 1274 aa15.31■□□□□ 0.04
SKA2-209ENST00000583976 PDPK2PQ6A1A2 396 aa15.31■□□□□ 0.04
SKA2-209ENST00000583976 ABRAXAS1Q6UWZ7 409 aa15.31■□□□□ 0.04
SKA2-209ENST00000583976 CLEC18BQ6UXF7 455 aa15.31■□□□□ 0.04
SKA2-209ENST00000583976 FAM83HQ6ZRV2 1179 aaPredicted RBP15.31■□□□□ 0.04
SKA2-209ENST00000583976 LINC00523Q86TU6 105 aa15.31■□□□□ 0.04
SKA2-209ENST00000583976 DNAAF3Q8N9W5 541 aa15.31■□□□□ 0.04
SKA2-209ENST00000583976 CLEC18CQ8NCF0 446 aa15.31■□□□□ 0.04
SKA2-209ENST00000583976 SPATA4Q8NEY3 305 aa15.31■□□□□ 0.04
SKA2-209ENST00000583976 CXorf40BQ96DE9 158 aa15.31■□□□□ 0.04
SKA2-209ENST00000583976 VPS35Q96QK1 796 aa15.31■□□□□ 0.04
SKA2-209ENST00000583976 SRPK1Q96SB4 655 aaKnown RBP15.31■□□□□ 0.04
SKA2-209ENST00000583976 SLC40A1Q9NP59 571 aa15.31■□□□□ 0.04
SKA2-209ENST00000583976 PCYOX1Q9UHG3 505 aa15.31■□□□□ 0.04
SKA2-209ENST00000583976 CDC23Q9UJX2 597 aa15.31■□□□□ 0.04
SKA2-209ENST00000583976 KCTD3Q9Y597 815 aa15.31■□□□□ 0.04
SKA2-209ENST00000583976 ARL5AQ9Y689 179 aa15.31■□□□□ 0.04
SKA2-209ENST00000583976 IGHV5-51A0A0C4DH38 117 aa15.3■□□□□ 0.04
SKA2-209ENST00000583976 TCRBV7S3A2A0A539 114 aa15.3■□□□□ 0.04
SKA2-209ENST00000583976 ERI2A8K979 691 aaKnown RBP15.3■□□□□ 0.04
SKA2-209ENST00000583976 VEGFDO43915 354 aa15.3■□□□□ 0.04
SKA2-209ENST00000583976 SPAG6O75602 509 aa15.3■□□□□ 0.04
SKA2-209ENST00000583976 PBLDP30039 288 aaPredicted RBP15.3■□□□□ 0.04
SKA2-209ENST00000583976 PTGIRP43119 386 aa15.3■□□□□ 0.04
SKA2-209ENST00000583976 MLLT10P55197 1068 aa15.3■□□□□ 0.04
SKA2-209ENST00000583976 RPS18P62269 152 aaKnown RBP15.3■□□□□ 0.04
SKA2-209ENST00000583976 MRPS25P82663 173 aaKnown RBP15.3■□□□□ 0.04
SKA2-209ENST00000583976 DR1Q01658 176 aa15.3■□□□□ 0.04
SKA2-209ENST00000583976 TUBB3Q13509 450 aa15.3■□□□□ 0.04
SKA2-209ENST00000583976 DNASE1L3Q13609 305 aa15.3■□□□□ 0.04
SKA2-209ENST00000583976 SEPT6Q14141 434 aa15.3■□□□□ 0.04
SKA2-209ENST00000583976 PTPRCAPQ14761 206 aa15.3■□□□□ 0.04
SKA2-209ENST00000583976 CRTC2Q53ET0 693 aaPredicted RBP15.3■□□□□ 0.04
SKA2-209ENST00000583976 AGAP9Q5VTM2 703 aa15.3■□□□□ 0.04
SKA2-209ENST00000583976 CPZQ66K79 652 aa15.3■□□□□ 0.04
SKA2-209ENST00000583976 FAM151BQ6UXP7 276 aa15.3■□□□□ 0.04
SKA2-209ENST00000583976 TTC30BQ8N4P2 665 aa15.3■□□□□ 0.04
SKA2-209ENST00000583976 KIF18AQ8NI77 898 aa15.3■□□□□ 0.04
SKA2-209ENST00000583976 GDAP1Q8TB36 358 aa15.3■□□□□ 0.04
SKA2-209ENST00000583976 KLHL6Q8WZ60 621 aa15.3■□□□□ 0.04
SKA2-209ENST00000583976 MIB2Q96AX9 1013 aa15.3■□□□□ 0.04
SKA2-209ENST00000583976 TRIM55Q9BYV6 548 aa15.3■□□□□ 0.04
SKA2-209ENST00000583976 TRABDQ9H4I3 376 aa15.3■□□□□ 0.04
SKA2-209ENST00000583976 AKIRIN1Q9H9L7 192 aaPredicted RBP15.3■□□□□ 0.04
SKA2-209ENST00000583976 ARNT2Q9HBZ2 717 aa15.3■□□□□ 0.04
SKA2-209ENST00000583976 HACD3Q9P035 362 aa15.3■□□□□ 0.04
SKA2-209ENST00000583976 ASIC3Q9UHC3 531 aa15.3■□□□□ 0.04
SKA2-209ENST00000583976 PSMD13Q9UNM6 376 aa15.3■□□□□ 0.04
SKA2-209ENST00000583976 CFAP20Q9Y6A4 193 aaKnown RBP15.3■□□□□ 0.04
SKA2-209ENST00000583976 TOX3O15405 576 aaPredicted RBP15.29■□□□□ 0.04
SKA2-209ENST00000583976 TTI1O43156 1089 aa15.29■□□□□ 0.04
SKA2-209ENST00000583976 SUN1O94901 812 aa15.29■□□□□ 0.04
SKA2-209ENST00000583976 EBLN1P0CF75 366 aa15.29■□□□□ 0.04
SKA2-209ENST00000583976 FGF5P12034 268 aa15.29■□□□□ 0.04
SKA2-209ENST00000583976 FOLR1P15328 257 aa15.29■□□□□ 0.04
SKA2-209ENST00000583976 NELFEP18615 380 aaKnown RBP15.29■□□□□ 0.04
SKA2-209ENST00000583976 UQCRFS1P47985 274 aa15.29■□□□□ 0.04
SKA2-209ENST00000583976 CDH17Q12864 832 aa15.29■□□□□ 0.04
SKA2-209ENST00000583976 KLRB1Q12918 225 aa15.29■□□□□ 0.04
SKA2-209ENST00000583976 CHAF1BQ13112 559 aa15.29■□□□□ 0.04
SKA2-209ENST00000583976 NFE2L1Q14494 772 aa15.29■□□□□ 0.04
SKA2-209ENST00000583976 POU6F1Q14863 301 aa15.29■□□□□ 0.04
SKA2-209ENST00000583976 RASGEF1AQ8N9B8 481 aa15.29■□□□□ 0.04
SKA2-209ENST00000583976 BRSK1Q8TDC3 778 aa15.29■□□□□ 0.04
SKA2-209ENST00000583976 TRIM51Q9BSJ1 452 aa15.29■□□□□ 0.04
SKA2-209ENST00000583976 TWSG1Q9GZX9 223 aa15.29■□□□□ 0.04
SKA2-209ENST00000583976 ACTL8Q9H568 366 aa15.29■□□□□ 0.04
SKA2-209ENST00000583976 IL26Q9NPH9 171 aa15.29■□□□□ 0.04
SKA2-209ENST00000583976 RAD18Q9NS91 495 aa15.29■□□□□ 0.04
SKA2-209ENST00000583976 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.29■□□□□ 0.04
SKA2-209ENST00000583976 POLHQ9Y253 713 aa15.29■□□□□ 0.04
SKA2-209ENST00000583976 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.28■□□□□ 0.04
SKA2-209ENST00000583976 CCDC78A2IDD5 438 aa15.28■□□□□ 0.04
SKA2-209ENST00000583976 OR2AG2A6NM03 316 aa15.28■□□□□ 0.04
SKA2-209ENST00000583976 C2orf81A6NN90 581 aa15.28■□□□□ 0.04
SKA2-209ENST00000583976 GAPDHSO14556 408 aaPredicted RBP15.28■□□□□ 0.04
SKA2-209ENST00000583976 STX7O15400 261 aaKnown RBP15.28■□□□□ 0.04
SKA2-209ENST00000583976 UGT1A9O60656 530 aa15.28■□□□□ 0.04
SKA2-209ENST00000583976 RFPL1O75677 317 aa15.28■□□□□ 0.04
SKA2-209ENST00000583976 UGT1A6P19224 532 aa15.28■□□□□ 0.04
SKA2-209ENST00000583976 IDSP22304 550 aa15.28■□□□□ 0.04
SKA2-209ENST00000583976 UGT1A1P22309 533 aa15.28■□□□□ 0.04
SKA2-209ENST00000583976 UGT1A4P22310 534 aa15.28■□□□□ 0.04
SKA2-209ENST00000583976 HMGCLP35914 325 aa15.28■□□□□ 0.04
SKA2-209ENST00000583976 PMS2P54278 862 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms