RNA–Protein interactions for RNA: ENST00000583320.5

SNX11-212, Transcript of sorting nexin 11, humanhuman

TSL 3

Gene SNX11, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-212ENST00000583320 ELP6Q0PNE2 266 aa17.6■□□□□ 0.41
SNX11-212ENST00000583320 ARHGEF7Q14155 803 aa17.6■□□□□ 0.41
SNX11-212ENST00000583320 IGFBP7Q16270 282 aa17.6■□□□□ 0.41
SNX11-212ENST00000583320 ZNF470Q6ECI4 717 aa17.6■□□□□ 0.41
SNX11-212ENST00000583320 KIAA1161Q6NSJ0 714 aa17.6■□□□□ 0.41
SNX11-212ENST00000583320 ERAP2Q6P179 960 aa17.6■□□□□ 0.41
SNX11-212ENST00000583320 PARS2Q7L3T8 475 aaKnown RBP17.6■□□□□ 0.41
SNX11-212ENST00000583320 SDCCAG8Q86SQ7 713 aaPredicted RBP17.6■□□□□ 0.41
SNX11-212ENST00000583320 ZFAND4Q86XD8 727 aa17.6■□□□□ 0.41
SNX11-212ENST00000583320 CILP2Q8IUL8 1156 aa17.6■□□□□ 0.41
SNX11-212ENST00000583320 PHACTR4Q8IZ21 702 aa17.6■□□□□ 0.41
SNX11-212ENST00000583320 KYQ8NBH2 561 aa17.6■□□□□ 0.41
SNX11-212ENST00000583320 WDR48Q8TAF3 677 aa17.6■□□□□ 0.41
SNX11-212ENST00000583320 ACMSDQ8TDX5 336 aa17.6■□□□□ 0.41
SNX11-212ENST00000583320 ISL2Q96A47 359 aa17.6■□□□□ 0.41
SNX11-212ENST00000583320 RAB7BQ96AH8 199 aa17.6■□□□□ 0.41
SNX11-212ENST00000583320 CCDC74AQ96AQ1 378 aa17.6■□□□□ 0.41
SNX11-212ENST00000583320 EID2BQ96D98 161 aa17.6■□□□□ 0.41
SNX11-212ENST00000583320 SLC25A18Q9H1K4 315 aa17.6■□□□□ 0.41
SNX11-212ENST00000583320 CNOT10Q9H9A5 744 aaKnown RBP17.6■□□□□ 0.41
SNX11-212ENST00000583320 PCDH12Q9NPG4 1184 aa17.6■□□□□ 0.41
SNX11-212ENST00000583320 GEMIN8Q9NWZ8 242 aaKnown RBP17.6■□□□□ 0.41
SNX11-212ENST00000583320 FOXJ2Q9P0K8 574 aa17.6■□□□□ 0.41
SNX11-212ENST00000583320 NFKBIL1Q9UBC1 381 aaPredicted RBP17.6■□□□□ 0.41
SNX11-212ENST00000583320 SPASTQ9UBP0 616 aa17.6■□□□□ 0.41
SNX11-212ENST00000583320 CORO1CQ9ULV4 474 aaPredicted RBP17.6■□□□□ 0.41
SNX11-212ENST00000583320 PRAMEF33A0A0G2JMD5 474 aa17.59■□□□□ 0.41
SNX11-212ENST00000583320 HMX2A2RU54 273 aa17.59■□□□□ 0.41
SNX11-212ENST00000583320 IGLON5A6NGN9 336 aa17.59■□□□□ 0.41
SNX11-212ENST00000583320 GOLGA8TH3BQL2 631 aa17.59■□□□□ 0.41
SNX11-212ENST00000583320 PSMD11O00231 422 aa17.59■□□□□ 0.41
SNX11-212ENST00000583320 FPGTO14772 594 aa17.59■□□□□ 0.41
SNX11-212ENST00000583320 PFDN6O15212 129 aa17.59■□□□□ 0.41
SNX11-212ENST00000583320 YY2O15391 372 aa17.59■□□□□ 0.41
SNX11-212ENST00000583320 PRAMEF10O60809 474 aa17.59■□□□□ 0.41
SNX11-212ENST00000583320 FOXN2P32314 431 aa17.59■□□□□ 0.41
SNX11-212ENST00000583320 ETV5P41161 510 aa17.59■□□□□ 0.41
SNX11-212ENST00000583320 CD151P48509 253 aa17.59■□□□□ 0.41
SNX11-212ENST00000583320 NEK3P51956 506 aa17.59■□□□□ 0.41
SNX11-212ENST00000583320 STC1P52823 247 aa17.59■□□□□ 0.41
SNX11-212ENST00000583320 CCL7P80098 99 aa17.59■□□□□ 0.41
SNX11-212ENST00000583320 XIAPP98170 497 aa17.59■□□□□ 0.41
SNX11-212ENST00000583320 SLC18A2Q05940 514 aa17.59■□□□□ 0.41
SNX11-212ENST00000583320 CCDC15Q0P6D6 951 aa17.59■□□□□ 0.41
SNX11-212ENST00000583320 PTPRCAPQ14761 206 aa17.59■□□□□ 0.41
SNX11-212ENST00000583320 TCEA2Q15560 299 aa17.59■□□□□ 0.41
SNX11-212ENST00000583320 TYSND1Q2T9J0 566 aa17.59■□□□□ 0.41
SNX11-212ENST00000583320 FASTKD1Q53R41 847 aaKnown RBP17.59■□□□□ 0.41
SNX11-212ENST00000583320 AARS2Q5JTZ9 985 aaKnown RBP17.59■□□□□ 0.41
SNX11-212ENST00000583320 MANEAQ5SRI9 462 aa17.59■□□□□ 0.41
SNX11-212ENST00000583320 LRRC66Q68CR7 880 aa17.59■□□□□ 0.41
SNX11-212ENST00000583320 TTC7BQ86TV6 843 aa17.59■□□□□ 0.41
SNX11-212ENST00000583320 ZC3HC1Q86WB0 502 aaKnown RBP17.59■□□□□ 0.41
SNX11-212ENST00000583320 SRRM1Q8IYB3 904 aaKnown RBP17.59■□□□□ 0.41
SNX11-212ENST00000583320 SDR16C5Q8N3Y7 309 aa17.59■□□□□ 0.41
SNX11-212ENST00000583320 SMC6Q96SB8 1091 aa17.59■□□□□ 0.41
SNX11-212ENST00000583320 C1QTNF2Q9BXJ5 285 aa17.59■□□□□ 0.41
SNX11-212ENST00000583320 CDH19Q9H159 772 aa17.59■□□□□ 0.41
SNX11-212ENST00000583320 SUDS3Q9H7L9 328 aaPredicted RBP17.59■□□□□ 0.41
SNX11-212ENST00000583320 INTS10Q9NVR2 710 aaKnown RBP17.59■□□□□ 0.41
SNX11-212ENST00000583320 SIRPGQ9P1W8 387 aa17.59■□□□□ 0.41
SNX11-212ENST00000583320 SLC17A6Q9P2U8 582 aa17.59■□□□□ 0.41
SNX11-212ENST00000583320 FKBPLQ9UIM3 349 aa17.59■□□□□ 0.41
SNX11-212ENST00000583320 ITM2BQ9Y287 266 aa17.59■□□□□ 0.41
SNX11-212ENST00000583320 VPS9D1Q9Y2B5 631 aa17.59■□□□□ 0.41
SNX11-212ENST00000583320 AHSGP02765 367 aa17.58■□□□□ 0.4
SNX11-212ENST00000583320 SFTPCP11686 197 aa17.58■□□□□ 0.4
SNX11-212ENST00000583320 LHCGRP22888 699 aa17.58■□□□□ 0.4
SNX11-212ENST00000583320 MC4RP32245 332 aa17.58■□□□□ 0.4
SNX11-212ENST00000583320 SPAM1P38567 509 aa17.58■□□□□ 0.4
SNX11-212ENST00000583320 MMP12P39900 470 aa17.58■□□□□ 0.4
SNX11-212ENST00000583320 CCNFP41002 786 aa17.58■□□□□ 0.4
SNX11-212ENST00000583320 INHBCP55103 352 aa17.58■□□□□ 0.4
SNX11-212ENST00000583320 CACNG1Q06432 222 aa17.58■□□□□ 0.4
SNX11-212ENST00000583320 EIF3IQ13347 325 aaKnown RBP17.58■□□□□ 0.4
SNX11-212ENST00000583320 CTBP1Q13363 440 aa17.58■□□□□ 0.4
SNX11-212ENST00000583320 PEX6Q13608 980 aa17.58■□□□□ 0.4
SNX11-212ENST00000583320 PTPRRQ15256 657 aa17.58■□□□□ 0.4
SNX11-212ENST00000583320 RNF187Q5TA31 235 aaPredicted RBP17.58■□□□□ 0.4
SNX11-212ENST00000583320 CERS6Q6ZMG9 384 aa17.58■□□□□ 0.4
SNX11-212ENST00000583320 TSPAN33Q86UF1 283 aa17.58■□□□□ 0.4
SNX11-212ENST00000583320 DENND6AQ8IWF6 608 aa17.58■□□□□ 0.4
SNX11-212ENST00000583320 GLMNQ92990 594 aa17.58■□□□□ 0.4
SNX11-212ENST00000583320 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.58■□□□□ 0.4
SNX11-212ENST00000583320 VPS39Q96JC1 886 aa17.58■□□□□ 0.4
SNX11-212ENST00000583320 PLEKHG4BQ96PX9 1271 aa17.58■□□□□ 0.4
SNX11-212ENST00000583320 GFM1Q96RP9 751 aaKnown RBP17.58■□□□□ 0.4
SNX11-212ENST00000583320 GPR22Q99680 433 aa17.58■□□□□ 0.4
SNX11-212ENST00000583320 MKS1Q9NXB0 559 aa17.58■□□□□ 0.4
SNX11-212ENST00000583320 PKD2L2Q9NZM6 624 aa17.58■□□□□ 0.4
SNX11-212ENST00000583320 GULP1Q9UBP9 304 aa17.58■□□□□ 0.4
SNX11-212ENST00000583320 MAN2B2Q9Y2E5 1009 aa17.58■□□□□ 0.4
SNX11-212ENST00000583320 LOXL2Q9Y4K0 774 aa17.58■□□□□ 0.4
SNX11-212ENST00000583320 ANKRD17O75179 2603 aaKnown RBP17.57■□□□□ 0.4
SNX11-212ENST00000583320 A0A1W2PPM1 405 aa17.57■□□□□ 0.4
SNX11-212ENST00000583320 CCL22O00626 93 aa17.57■□□□□ 0.4
SNX11-212ENST00000583320 AREL1O15033 823 aa17.57■□□□□ 0.4
SNX11-212ENST00000583320 NVLO15381 856 aaKnown RBP17.57■□□□□ 0.4
SNX11-212ENST00000583320 PRPF4O43172 522 aaKnown RBP eCLIP17.57■□□□□ 0.4
SNX11-212ENST00000583320 RFPL1O75677 317 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms