RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 A0A1B0GTQ1 180 aa9.33□□□□□ -0.92
RFFL-210ENST00000582308 GOLGA6L10A6NI86 522 aa9.33□□□□□ -0.92
RFFL-210ENST00000582308 H3BM21 787 aa9.33□□□□□ -0.92
RFFL-210ENST00000582308 KHNYNO15037 678 aaKnown RBP9.33□□□□□ -0.92
RFFL-210ENST00000582308 OPA1O60313 960 aa9.33□□□□□ -0.92
RFFL-210ENST00000582308 SDC3O75056 442 aa9.33□□□□□ -0.92
RFFL-210ENST00000582308 SNRNP200O75643 2136 aaKnown RBP9.33□□□□□ -0.92
RFFL-210ENST00000582308 SYF2O95926 243 aaKnown RBP9.33□□□□□ -0.92
RFFL-210ENST00000582308 SYPP08247 313 aa9.33□□□□□ -0.92
RFFL-210ENST00000582308 ZNF806P0C7X5 589 aa9.33□□□□□ -0.92
RFFL-210ENST00000582308 CBSLP0DN79 551 aa9.33□□□□□ -0.92
RFFL-210ENST00000582308 BRAFP15056 766 aa9.33□□□□□ -0.92
RFFL-210ENST00000582308 KRT4P19013 534 aa9.33□□□□□ -0.92
RFFL-210ENST00000582308 IDSP22304 550 aa9.33□□□□□ -0.92
RFFL-210ENST00000582308 DGKAP23743 735 aa9.33□□□□□ -0.92
RFFL-210ENST00000582308 RPL10P27635 214 aaKnown RBP9.33□□□□□ -0.92
RFFL-210ENST00000582308 ACADLP28330 430 aa9.33□□□□□ -0.92
RFFL-210ENST00000582308 ATP5DP30049 168 aa9.33□□□□□ -0.92
RFFL-210ENST00000582308 CBSP35520 551 aa9.33□□□□□ -0.92
RFFL-210ENST00000582308 CCNFP41002 786 aa9.33□□□□□ -0.92
RFFL-210ENST00000582308 ACTR1BP42025 376 aa9.33□□□□□ -0.92
RFFL-210ENST00000582308 ACTR1AP61163 376 aa9.33□□□□□ -0.92
RFFL-210ENST00000582308 IL9RQ01113 521 aa9.33□□□□□ -0.92
RFFL-210ENST00000582308 PLOD1Q02809 727 aaPredicted RBP9.33□□□□□ -0.92
RFFL-210ENST00000582308 SLC18A2Q05940 514 aa9.33□□□□□ -0.92
RFFL-210ENST00000582308 ILF3Q12906 894 aaKnown RBP eCLIP9.33□□□□□ -0.92
RFFL-210ENST00000582308 RPA4Q13156 261 aa9.33□□□□□ -0.92
RFFL-210ENST00000582308 CSHL1Q14406 222 aa9.33□□□□□ -0.92
RFFL-210ENST00000582308 CLCA4Q14CN2 919 aa9.33□□□□□ -0.92
RFFL-210ENST00000582308 SYTL3Q4VX76 610 aa9.33□□□□□ -0.92
RFFL-210ENST00000582308 TAF1BQ53T94 588 aaPredicted RBP9.33□□□□□ -0.92
RFFL-210ENST00000582308 TTMPQ5BVD1 217 aa9.33□□□□□ -0.92
RFFL-210ENST00000582308 AGBL2Q5U5Z8 902 aa9.33□□□□□ -0.92
RFFL-210ENST00000582308 CAPRIN2Q6IMN6 1127 aaKnown RBP9.33□□□□□ -0.92
RFFL-210ENST00000582308 WASH2PQ6VEQ5 465 aa9.33□□□□□ -0.92
RFFL-210ENST00000582308 KANSL1Q7Z3B3 1105 aa9.33□□□□□ -0.92
RFFL-210ENST00000582308 PIWIL4Q7Z3Z4 852 aaKnown RBP9.33□□□□□ -0.92
RFFL-210ENST00000582308 CCDC91Q7Z6B0 441 aa9.33□□□□□ -0.92
RFFL-210ENST00000582308 TAF8Q7Z7C8 310 aa9.33□□□□□ -0.92
RFFL-210ENST00000582308 CLEC14AQ86T13 490 aa9.33□□□□□ -0.92
RFFL-210ENST00000582308 RASGRP3Q8IV61 690 aa9.33□□□□□ -0.92
RFFL-210ENST00000582308 C4orf33Q8N1A6 199 aa9.33□□□□□ -0.92
RFFL-210ENST00000582308 SLC25A45Q8N413 288 aa9.33□□□□□ -0.92
RFFL-210ENST00000582308 NKAPQ8N5F7 415 aaKnown RBP9.33□□□□□ -0.92
RFFL-210ENST00000582308 SPDYE1Q8NFV5 336 aaPredicted RBP9.33□□□□□ -0.92
RFFL-210ENST00000582308 LMX1AQ8TE12 382 aa9.33□□□□□ -0.92
RFFL-210ENST00000582308 KCTD4Q8WVF5 259 aa9.33□□□□□ -0.92
RFFL-210ENST00000582308 GLMNQ92990 594 aa9.33□□□□□ -0.92
RFFL-210ENST00000582308 NXNL1Q96CM4 212 aa9.33□□□□□ -0.92
RFFL-210ENST00000582308 TLCD1Q96CP7 247 aa9.33□□□□□ -0.92
RFFL-210ENST00000582308 LINGO1Q96FE5 620 aa9.33□□□□□ -0.92
RFFL-210ENST00000582308 PDLIM5Q96HC4 596 aaKnown RBP9.33□□□□□ -0.92
RFFL-210ENST00000582308 RMDN2Q96LZ7 410 aa9.33□□□□□ -0.92
RFFL-210ENST00000582308 GPR78Q96P69 363 aa9.33□□□□□ -0.92
RFFL-210ENST00000582308 NUSAP1Q9BXS6 441 aaKnown RBP9.33□□□□□ -0.92
RFFL-210ENST00000582308 GSDMCQ9BYG8 508 aa9.33□□□□□ -0.92
RFFL-210ENST00000582308 UNKQ9C0B0 810 aaKnown RBP9.33□□□□□ -0.92
RFFL-210ENST00000582308 ZDHHC5Q9C0B5 715 aa9.33□□□□□ -0.92
RFFL-210ENST00000582308 DERL2Q9GZP9 239 aa9.33□□□□□ -0.92
RFFL-210ENST00000582308 WWP1Q9H0M0 922 aa9.33□□□□□ -0.92
RFFL-210ENST00000582308 DPEP2Q9H4A9 486 aa9.33□□□□□ -0.92
RFFL-210ENST00000582308 GAREM1Q9H706 876 aa9.33□□□□□ -0.92
RFFL-210ENST00000582308 SYTL2Q9HCH5 934 aa9.33□□□□□ -0.92
RFFL-210ENST00000582308 WASH6PQ9NQA3 447 aa9.33□□□□□ -0.92
RFFL-210ENST00000582308 IGSF5Q9NSI5 407 aa9.33□□□□□ -0.92
RFFL-210ENST00000582308 PCMTD2Q9NV79 361 aa9.33□□□□□ -0.92
RFFL-210ENST00000582308 ZNF358Q9NW07 568 aa9.33□□□□□ -0.92
RFFL-210ENST00000582308 SCHIP1Q9P0W5 487 aaPredicted RBP9.33□□□□□ -0.92
RFFL-210ENST00000582308 TAAR2Q9P1P5 351 aa9.33□□□□□ -0.92
RFFL-210ENST00000582308 SPASTQ9UBP0 616 aa9.33□□□□□ -0.92
RFFL-210ENST00000582308 PSMD13Q9UNM6 376 aa9.33□□□□□ -0.92
RFFL-210ENST00000582308 NOVA2Q9UNW9 492 aaKnown RBP9.33□□□□□ -0.92
RFFL-210ENST00000582308 RUVBL2Q9Y230 463 aaKnown RBP9.33□□□□□ -0.92
RFFL-210ENST00000582308 WDR37Q9Y2I8 494 aa9.33□□□□□ -0.92
RFFL-210ENST00000582308 ZFHX2Q9C0A1 2572 aaPredicted RBP9.32□□□□□ -0.92
RFFL-210ENST00000582308 UNC13CQ8NB66 2214 aa9.32□□□□□ -0.92
RFFL-210ENST00000582308 ZNF292O60281 2723 aa9.32□□□□□ -0.92
RFFL-210ENST00000582308 A6NCN8 305 aa9.32□□□□□ -0.92
RFFL-210ENST00000582308 LMO7DNF2Z398 122 aa9.32□□□□□ -0.92
RFFL-210ENST00000582308 EIF3FO00303 357 aaPredicted RBP9.32□□□□□ -0.92
RFFL-210ENST00000582308 CDC7O00311 574 aa9.32□□□□□ -0.92
RFFL-210ENST00000582308 YY2O15391 372 aa9.32□□□□□ -0.92
RFFL-210ENST00000582308 AQP9O43315 295 aa9.32□□□□□ -0.92
RFFL-210ENST00000582308 ZBTB14O43829 449 aa9.32□□□□□ -0.92
RFFL-210ENST00000582308 DFNA5O60443 496 aa9.32□□□□□ -0.92
RFFL-210ENST00000582308 SNX2O60749 519 aa9.32□□□□□ -0.92
RFFL-210ENST00000582308 KLHL2O95198 593 aa9.32□□□□□ -0.92
RFFL-210ENST00000582308 MATN4O95460 622 aa9.32□□□□□ -0.92
RFFL-210ENST00000582308 LMNAP02545 664 aaKnown RBP9.32□□□□□ -0.92
RFFL-210ENST00000582308 LTA4HP09960 611 aaKnown RBP9.32□□□□□ -0.92
RFFL-210ENST00000582308 GIMD1P0DJR0 217 aa9.32□□□□□ -0.92
RFFL-210ENST00000582308 MPC1LP0DKB6 136 aa9.32□□□□□ -0.92
RFFL-210ENST00000582308 COL6A2P12110 1019 aa9.32□□□□□ -0.92
RFFL-210ENST00000582308 ENO3P13929 434 aaPredicted RBP9.32□□□□□ -0.92
RFFL-210ENST00000582308 CD1DP15813 335 aa9.32□□□□□ -0.92
RFFL-210ENST00000582308 ENGP17813 658 aa9.32□□□□□ -0.92
RFFL-210ENST00000582308 SLC26A3P40879 764 aa9.32□□□□□ -0.92
RFFL-210ENST00000582308 ARRB1P49407 418 aaPredicted RBP9.32□□□□□ -0.92
RFFL-210ENST00000582308 RGS4P49798 205 aa9.32□□□□□ -0.92
RFFL-210ENST00000582308 ABRQ12979 859 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms