RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 ANKRD12Q6UB98 2062 aa22.24■■□□□ 1.15
CCDC47-204ENST00000582252 RFLNAQ6ZTI6 216 aa22.24■■□□□ 1.15
CCDC47-204ENST00000582252 CDYL2Q8N8U2 506 aa22.24■■□□□ 1.15
CCDC47-204ENST00000582252 METTL6Q8TCB7 284 aa22.24■■□□□ 1.15
CCDC47-204ENST00000582252 DNAJC9Q8WXX5 260 aa22.24■■□□□ 1.15
CCDC47-204ENST00000582252 ZFYVE19Q96K21 471 aa22.24■■□□□ 1.15
CCDC47-204ENST00000582252 CDX2Q99626 313 aaPredicted RBP22.24■■□□□ 1.15
CCDC47-204ENST00000582252 VCX3BQ9H321 246 aa22.24■■□□□ 1.15
CCDC47-204ENST00000582252 EBF3Q9H4W6 596 aa22.24■■□□□ 1.15
CCDC47-204ENST00000582252 UBE2ZQ9H832 354 aaPredicted RBP22.24■■□□□ 1.15
CCDC47-204ENST00000582252 CD84Q9UIB8 345 aa22.24■■□□□ 1.15
CCDC47-204ENST00000582252 CROTQ9UKG9 612 aa22.24■■□□□ 1.15
CCDC47-204ENST00000582252 KIAA1549LQ6ZVL6 1849 aa22.24■■□□□ 1.15
CCDC47-204ENST00000582252 C16orf96A6NNT2 1141 aa22.23■■□□□ 1.15
CCDC47-204ENST00000582252 PSMD11O00231 422 aa22.23■■□□□ 1.15
CCDC47-204ENST00000582252 MSH3P20585 1137 aa22.23■■□□□ 1.15
CCDC47-204ENST00000582252 HMOX2P30519 316 aa22.23■■□□□ 1.15
CCDC47-204ENST00000582252 HSPA7P48741 367 aa22.23■■□□□ 1.15
CCDC47-204ENST00000582252 THOP1P52888 689 aa22.23■■□□□ 1.15
CCDC47-204ENST00000582252 ERVPABLB-1P60509 514 aa22.23■■□□□ 1.15
CCDC47-204ENST00000582252 ERVK-8P63133 956 aa22.23■■□□□ 1.15
CCDC47-204ENST00000582252 CDKL1Q00532 357 aa22.23■■□□□ 1.15
CCDC47-204ENST00000582252 SMAD4Q13485 552 aaKnown RBP22.23■■□□□ 1.15
CCDC47-204ENST00000582252 FLOT2Q14254 428 aa22.23■■□□□ 1.15
CCDC47-204ENST00000582252 COQ5Q5HYK3 327 aa22.23■■□□□ 1.15
CCDC47-204ENST00000582252 PRMT9Q6P2P2 845 aa22.23■■□□□ 1.15
CCDC47-204ENST00000582252 HSD11B1LQ7Z5J1 315 aa22.23■■□□□ 1.15
CCDC47-204ENST00000582252 ETFBKMTQ8IXQ9 262 aa22.23■■□□□ 1.15
CCDC47-204ENST00000582252 DLG3Q92796 817 aa22.23■■□□□ 1.15
CCDC47-204ENST00000582252 FGF14Q92915 247 aa22.23■■□□□ 1.15
CCDC47-204ENST00000582252 RHBDF1Q96CC6 855 aa22.23■■□□□ 1.15
CCDC47-204ENST00000582252 IPPKQ9H8X2 491 aa22.23■■□□□ 1.15
CCDC47-204ENST00000582252 NMRK1Q9NWW6 199 aa22.23■■□□□ 1.15
CCDC47-204ENST00000582252 ADA2Q9NZK5 511 aa22.23■■□□□ 1.15
CCDC47-204ENST00000582252 DEC1Q9P2X7 70 aa22.23■■□□□ 1.15
CCDC47-204ENST00000582252 ASB1Q9Y576 335 aa22.23■■□□□ 1.15
CCDC47-204ENST00000582252 K7EPI3 171 aa22.23■■□□□ 1.15
CCDC47-204ENST00000582252 FBP2O00757 339 aa22.23■■□□□ 1.15
CCDC47-204ENST00000582252 ANGPT2O15123 496 aa22.23■■□□□ 1.15
CCDC47-204ENST00000582252 NUAK1O60285 661 aa22.23■■□□□ 1.15
CCDC47-204ENST00000582252 SORBS2O94875 1100 aaKnown RBP22.23■■□□□ 1.15
CCDC47-204ENST00000582252 FTH1P02794 183 aa22.23■■□□□ 1.15
CCDC47-204ENST00000582252 CTSLP07711 333 aa22.23■■□□□ 1.15
CCDC47-204ENST00000582252 ACADSP16219 412 aa22.23■■□□□ 1.15
CCDC47-204ENST00000582252 CCR7P32248 378 aa22.23■■□□□ 1.15
CCDC47-204ENST00000582252 SP140Q13342 867 aa22.23■■□□□ 1.15
CCDC47-204ENST00000582252 ATP6AP1LQ52LC2 224 aa22.23■■□□□ 1.15
CCDC47-204ENST00000582252 ZFP1Q6P2D0 407 aa22.23■■□□□ 1.15
CCDC47-204ENST00000582252 PARM1Q6UWI2 310 aa22.23■■□□□ 1.15
CCDC47-204ENST00000582252 MILR1Q7Z6M3 343 aa22.23■■□□□ 1.15
CCDC47-204ENST00000582252 NRSN1Q8IZ57 195 aa22.23■■□□□ 1.15
CCDC47-204ENST00000582252 EFCAB3Q8N7B9 438 aa22.23■■□□□ 1.15
CCDC47-204ENST00000582252 OR52B6Q8NGF0 335 aa22.23■■□□□ 1.15
CCDC47-204ENST00000582252 NAT14Q8WUY8 206 aa22.23■■□□□ 1.15
CCDC47-204ENST00000582252 NAF1Q96HR8 494 aaKnown RBP22.23■■□□□ 1.15
CCDC47-204ENST00000582252 KXD1Q9BQD3 176 aa22.23■■□□□ 1.15
CCDC47-204ENST00000582252 SPAG4Q9NPE6 437 aa22.23■■□□□ 1.15
CCDC47-204ENST00000582252 AIG1Q9NVV5 245 aa22.23■■□□□ 1.15
CCDC47-204ENST00000582252 PCDHGA7Q9Y5G6 932 aa22.23■■□□□ 1.15
CCDC47-204ENST00000582252 NR5A2O00482 541 aa22.22■■□□□ 1.15
CCDC47-204ENST00000582252 OR7A17O14581 309 aa22.22■■□□□ 1.15
CCDC47-204ENST00000582252 SLC16A5O15375 505 aa22.22■■□□□ 1.15
CCDC47-204ENST00000582252 TAPBPO15533 448 aa22.22■■□□□ 1.15
CCDC47-204ENST00000582252 KATNA1O75449 491 aa22.22■■□□□ 1.15
CCDC47-204ENST00000582252 CAPN1P07384 714 aa22.22■■□□□ 1.15
CCDC47-204ENST00000582252 FOSL2P15408 326 aa22.22■■□□□ 1.15
CCDC47-204ENST00000582252 GBX1Q14549 363 aa22.22■■□□□ 1.15
CCDC47-204ENST00000582252 SKIV2LQ15477 1246 aaKnown RBP22.22■■□□□ 1.15
CCDC47-204ENST00000582252 PHKG1Q16816 387 aa22.22■■□□□ 1.15
CCDC47-204ENST00000582252 LDLRAP1Q5SW96 308 aa22.22■■□□□ 1.15
CCDC47-204ENST00000582252 LETMD1Q6P1Q0 360 aa22.22■■□□□ 1.15
CCDC47-204ENST00000582252 NEK10Q6ZWH5 1172 aa22.22■■□□□ 1.15
CCDC47-204ENST00000582252 Q7L0L9 218 aa22.22■■□□□ 1.15
CCDC47-204ENST00000582252 KBTBD6Q86V97 674 aa22.22■■□□□ 1.15
CCDC47-204ENST00000582252 C12orf40Q86WS4 652 aa22.22■■□□□ 1.15
CCDC47-204ENST00000582252 CPA6Q8N4T0 437 aa22.22■■□□□ 1.15
CCDC47-204ENST00000582252 DDHD1Q8NEL9 900 aa22.22■■□□□ 1.15
CCDC47-204ENST00000582252 ST13P5Q8NFI4 369 aaPredicted RBP22.22■■□□□ 1.15
CCDC47-204ENST00000582252 OR4F6Q8NGB9 312 aa22.22■■□□□ 1.15
CCDC47-204ENST00000582252 PYDC1Q8WXC3 89 aa22.22■■□□□ 1.15
CCDC47-204ENST00000582252 GID8Q9NWU2 228 aa22.22■■□□□ 1.15
CCDC47-204ENST00000582252 SUCOQ9UBS9 1254 aaKnown RBP22.22■■□□□ 1.15
CCDC47-204ENST00000582252 PPM1HQ9ULR3 514 aa22.22■■□□□ 1.15
CCDC47-204ENST00000582252 COL4A3Q01955 1670 aa22.21■■□□□ 1.15
CCDC47-204ENST00000582252 EDDM13A0A1B0GTR0 161 aa22.21■■□□□ 1.15
CCDC47-204ENST00000582252 RPSAP08865 295 aaKnown RBP22.21■■□□□ 1.15
CCDC47-204ENST00000582252 HIST1H2AGP0C0S8 130 aaPredicted RBP22.21■■□□□ 1.15
CCDC47-204ENST00000582252 ELFN1P0C7U0 828 aa22.21■■□□□ 1.15
CCDC47-204ENST00000582252 HIST1H2ADP20671 130 aa22.21■■□□□ 1.15
CCDC47-204ENST00000582252 ATP6V1C1P21283 382 aa22.21■■□□□ 1.15
CCDC47-204ENST00000582252 MMP12P39900 470 aa22.21■■□□□ 1.15
CCDC47-204ENST00000582252 RALGDSQ12967 914 aa22.21■■□□□ 1.15
CCDC47-204ENST00000582252 CEACAM7Q14002 265 aa22.21■■□□□ 1.15
CCDC47-204ENST00000582252 GRM2Q14416 872 aa22.21■■□□□ 1.15
CCDC47-204ENST00000582252 CCDC85BQ15834 202 aaPredicted RBP22.21■■□□□ 1.15
CCDC47-204ENST00000582252 PDCD4Q53EL6 469 aaKnown RBP22.21■■□□□ 1.15
CCDC47-204ENST00000582252 FNDC3BQ53EP0 1204 aaKnown RBP22.21■■□□□ 1.15
CCDC47-204ENST00000582252 HENMT1Q5T8I9 393 aaKnown RBP22.21■■□□□ 1.15
CCDC47-204ENST00000582252 TLDC1Q6P9B6 456 aa22.21■■□□□ 1.15
CCDC47-204ENST00000582252 RNF165Q6ZSG1 346 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms