RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 LINGO1Q96FE5 620 aa4.48□□□□□ -1.69
SMCHD1-205ENST00000581383 FNDC11Q9BVV2 318 aa4.48□□□□□ -1.69
SMCHD1-205ENST00000581383 C1QTNF4Q9BXJ3 329 aa4.48□□□□□ -1.69
SMCHD1-205ENST00000581383 MOV10L1Q9BXT6 1211 aaKnown RBP4.48□□□□□ -1.69
SMCHD1-205ENST00000581383 CNOT10Q9H9A5 744 aaKnown RBP4.48□□□□□ -1.69
SMCHD1-205ENST00000581383 TBC1D17Q9HA65 648 aa4.48□□□□□ -1.69
SMCHD1-205ENST00000581383 TRPC7Q9HCX4 862 aa4.48□□□□□ -1.69
SMCHD1-205ENST00000581383 EQTNQ9NQ60 294 aa4.48□□□□□ -1.69
SMCHD1-205ENST00000581383 MIOSQ9NXC5 875 aa4.48□□□□□ -1.69
SMCHD1-205ENST00000581383 OSGIN1Q9UJX0 560 aa4.48□□□□□ -1.69
SMCHD1-205ENST00000581383 DLGAP4Q9Y2H0 992 aa4.48□□□□□ -1.69
SMCHD1-205ENST00000581383 CCL27Q9Y4X3 112 aa4.48□□□□□ -1.69
SMCHD1-205ENST00000581383 ANKUB1A6NFN9 424 aa4.47□□□□□ -1.69
SMCHD1-205ENST00000581383 C5orf60A6NFR6 353 aa4.47□□□□□ -1.69
SMCHD1-205ENST00000581383 BUD23O43709 281 aaKnown RBP4.47□□□□□ -1.69
SMCHD1-205ENST00000581383 TSPAN1O60635 241 aa4.47□□□□□ -1.69
SMCHD1-205ENST00000581383 TOMM70O94826 608 aa4.47□□□□□ -1.69
SMCHD1-205ENST00000581383 SLCO2B1O94956 709 aa4.47□□□□□ -1.69
SMCHD1-205ENST00000581383 RAD23AP54725 363 aa4.47□□□□□ -1.69
SMCHD1-205ENST00000581383 EEF1A2Q05639 463 aaKnown RBP4.47□□□□□ -1.69
SMCHD1-205ENST00000581383 SPECC1Q5M775 1068 aa4.47□□□□□ -1.69
SMCHD1-205ENST00000581383 RNASEH2BQ5TBB1 312 aaKnown RBP4.47□□□□□ -1.69
SMCHD1-205ENST00000581383 FAM109BQ6ICB4 259 aaPredicted RBP4.47□□□□□ -1.69
SMCHD1-205ENST00000581383 PLXDC2Q6UX71 529 aa4.47□□□□□ -1.69
SMCHD1-205ENST00000581383 RBM23Q86U06 439 aaKnown RBP4.47□□□□□ -1.69
SMCHD1-205ENST00000581383 SLC9B2Q86UD5 537 aa4.47□□□□□ -1.69
SMCHD1-205ENST00000581383 PTOV1Q86YD1 416 aa4.47□□□□□ -1.69
SMCHD1-205ENST00000581383 MUC20Q8N307 709 aaPredicted RBP4.47□□□□□ -1.69
SMCHD1-205ENST00000581383 RDM1Q8NG50 284 aa4.47□□□□□ -1.69
SMCHD1-205ENST00000581383 EXD1Q8NHP7 514 aa4.47□□□□□ -1.69
SMCHD1-205ENST00000581383 SPATA20Q8TB22 786 aa4.47□□□□□ -1.69
SMCHD1-205ENST00000581383 SMPDL3BQ92485 455 aa4.47□□□□□ -1.69
SMCHD1-205ENST00000581383 MRPS27Q92552 414 aaKnown RBP4.47□□□□□ -1.69
SMCHD1-205ENST00000581383 IL17FQ96PD4 163 aa4.47□□□□□ -1.69
SMCHD1-205ENST00000581383 MS4A10Q96PG2 267 aa4.47□□□□□ -1.69
SMCHD1-205ENST00000581383 DUX5Q96PT3 197 aa4.47□□□□□ -1.69
SMCHD1-205ENST00000581383 EPYCQ99645 322 aa4.47□□□□□ -1.69
SMCHD1-205ENST00000581383 POLR3CQ9BUI4 534 aaPredicted RBP4.47□□□□□ -1.69
SMCHD1-205ENST00000581383 DPAGT1Q9H3H5 408 aa4.47□□□□□ -1.69
SMCHD1-205ENST00000581383 NOL11Q9H8H0 719 aaKnown RBP4.47□□□□□ -1.69
SMCHD1-205ENST00000581383 DDX31Q9H8H2 851 aaKnown RBP4.47□□□□□ -1.69
SMCHD1-205ENST00000581383 OSER1Q9NX31 292 aa4.47□□□□□ -1.69
SMCHD1-205ENST00000581383 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.47□□□□□ -1.69
SMCHD1-205ENST00000581383 ASPDHA6ND91 283 aa4.46□□□□□ -1.7
SMCHD1-205ENST00000581383 ERVV-2B6SEH9 535 aa4.46□□□□□ -1.7
SMCHD1-205ENST00000581383 TULP2O00295 520 aa4.46□□□□□ -1.7
SMCHD1-205ENST00000581383 GPR137BO60478 399 aa4.46□□□□□ -1.7
SMCHD1-205ENST00000581383 MED24O75448 989 aa4.46□□□□□ -1.7
SMCHD1-205ENST00000581383 TFAP2AP05549 437 aa4.46□□□□□ -1.7
SMCHD1-205ENST00000581383 LIPFP07098 398 aa4.46□□□□□ -1.7
SMCHD1-205ENST00000581383 AHRP35869 848 aa4.46□□□□□ -1.7
SMCHD1-205ENST00000581383 MLLT10P55197 1068 aa4.46□□□□□ -1.7
SMCHD1-205ENST00000581383 POU3F1Q03052 451 aaPredicted RBP4.46□□□□□ -1.7
SMCHD1-205ENST00000581383 HSPB3Q12988 150 aa4.46□□□□□ -1.7
SMCHD1-205ENST00000581383 NR1D2Q14995 579 aa4.46□□□□□ -1.7
SMCHD1-205ENST00000581383 KRBOX4Q5JUW0 171 aa4.46□□□□□ -1.7
SMCHD1-205ENST00000581383 NDUFAF5Q5TEU4 345 aa4.46□□□□□ -1.7
SMCHD1-205ENST00000581383 CST9LP1Q5W188 147 aa4.46□□□□□ -1.7
SMCHD1-205ENST00000581383 KLC3Q6P597 504 aa4.46□□□□□ -1.7
SMCHD1-205ENST00000581383 RBPMS2Q6ZRY4 209 aaKnown RBP4.46□□□□□ -1.7
SMCHD1-205ENST00000581383 TUBA1AQ71U36 451 aa4.46□□□□□ -1.7
SMCHD1-205ENST00000581383 ZNF329Q86UD4 541 aa4.46□□□□□ -1.7
SMCHD1-205ENST00000581383 SLC4A11Q8NBS3 891 aa4.46□□□□□ -1.7
SMCHD1-205ENST00000581383 LNX1Q8TBB1 728 aaPredicted RBP4.46□□□□□ -1.7
SMCHD1-205ENST00000581383 DAZLQ92904 295 aaKnown RBP4.46□□□□□ -1.7
SMCHD1-205ENST00000581383 MTERF3Q96E29 417 aa4.46□□□□□ -1.7
SMCHD1-205ENST00000581383 TUBA1CQ9BQE3 449 aa4.46□□□□□ -1.7
SMCHD1-205ENST00000581383 ST6GALNAC4Q9H4F1 302 aa4.46□□□□□ -1.7
SMCHD1-205ENST00000581383 ANKZF1Q9H8Y5 726 aa4.46□□□□□ -1.7
SMCHD1-205ENST00000581383 ERVMER34-1Q9H9K5 563 aa4.46□□□□□ -1.7
SMCHD1-205ENST00000581383 EBF2Q9HAK2 575 aa4.46□□□□□ -1.7
SMCHD1-205ENST00000581383 KLHL1Q9NR64 748 aa4.46□□□□□ -1.7
SMCHD1-205ENST00000581383 PRMT7Q9NVM4 692 aaPredicted RBP4.46□□□□□ -1.7
SMCHD1-205ENST00000581383 ERRFI1Q9UJM3 462 aaPredicted RBP4.46□□□□□ -1.7
SMCHD1-205ENST00000581383 DOCK7Q96N67 2140 aa4.45□□□□□ -1.7
SMCHD1-205ENST00000581383 A0A1W2PPM1 405 aa4.45□□□□□ -1.7
SMCHD1-205ENST00000581383 ELOVL7A1L3X0 281 aa4.45□□□□□ -1.7
SMCHD1-205ENST00000581383 PRAC2D3DTV9 90 aa4.45□□□□□ -1.7
SMCHD1-205ENST00000581383 MEIS2O14770 477 aa4.45□□□□□ -1.7
SMCHD1-205ENST00000581383 C22orf31O95567 290 aa4.45□□□□□ -1.7
SMCHD1-205ENST00000581383 HSPA4LO95757 839 aa4.45□□□□□ -1.7
SMCHD1-205ENST00000581383 LINGO3P0C6S8 592 aa4.45□□□□□ -1.7
SMCHD1-205ENST00000581383 RAB28P51157 221 aa4.45□□□□□ -1.7
SMCHD1-205ENST00000581383 MMP15P51511 669 aa4.45□□□□□ -1.7
SMCHD1-205ENST00000581383 ZNF132P52740 706 aa4.45□□□□□ -1.7
SMCHD1-205ENST00000581383 IRX6P78412 446 aaPredicted RBP4.45□□□□□ -1.7
SMCHD1-205ENST00000581383 COASYQ13057 564 aa4.45□□□□□ -1.7
SMCHD1-205ENST00000581383 ARMC4Q5T2S8 1044 aa4.45□□□□□ -1.7
SMCHD1-205ENST00000581383 FAM47EQ6ZV65 393 aa4.45□□□□□ -1.7
SMCHD1-205ENST00000581383 CHST3Q7LGC8 479 aa4.45□□□□□ -1.7
SMCHD1-205ENST00000581383 PIWIL4Q7Z3Z4 852 aaKnown RBP4.45□□□□□ -1.7
SMCHD1-205ENST00000581383 CENPVQ7Z7K6 275 aaPredicted RBP4.45□□□□□ -1.7
SMCHD1-205ENST00000581383 SLFN11Q7Z7L1 901 aa4.45□□□□□ -1.7
SMCHD1-205ENST00000581383 DSG4Q86SJ6 1040 aa4.45□□□□□ -1.7
SMCHD1-205ENST00000581383 VSIG1Q86XK7 387 aa4.45□□□□□ -1.7
SMCHD1-205ENST00000581383 FAM114A1Q8IWE2 563 aa4.45□□□□□ -1.7
SMCHD1-205ENST00000581383 XXYLT1Q8NBI6 393 aa4.45□□□□□ -1.7
SMCHD1-205ENST00000581383 PAPD5Q8NDF8 572 aaKnown RBP4.45□□□□□ -1.7
SMCHD1-205ENST00000581383 OR5M8Q8NGP6 311 aa4.45□□□□□ -1.7
SMCHD1-205ENST00000581383 SECTM1Q8WVN6 248 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms