RNA–Protein interactions for RNA: ENST00000581113.6

NF1-220, Transcript of neurofibromin 1, humanhuman

TSL 5

Gene NF1, Length 1,464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-220ENST00000581113 EIF3DO15371 548 aaKnown RBP eCLIP4.24□□□□□ -1.73
NF1-220ENST00000581113 ZBTB43O43298 467 aa4.24□□□□□ -1.73
NF1-220ENST00000581113 ATP1A1P05023 1023 aaKnown RBP4.24□□□□□ -1.73
NF1-220ENST00000581113 NR2F2P24468 414 aa4.24□□□□□ -1.73
NF1-220ENST00000581113 HOXA13P31271 388 aaPredicted RBP4.24□□□□□ -1.73
NF1-220ENST00000581113 PSMB10P40306 273 aa4.24□□□□□ -1.73
NF1-220ENST00000581113 CLNS1AP54105 237 aaKnown RBP4.24□□□□□ -1.73
NF1-220ENST00000581113 CREB5Q02930 508 aa4.24□□□□□ -1.73
NF1-220ENST00000581113 ARL16Q0P5N6 197 aa4.24□□□□□ -1.73
NF1-220ENST00000581113 PRKG2Q13237 762 aa4.24□□□□□ -1.73
NF1-220ENST00000581113 GDPD4Q6W3E5 623 aa4.24□□□□□ -1.73
NF1-220ENST00000581113 KCTD8Q6ZWB6 473 aa4.24□□□□□ -1.73
NF1-220ENST00000581113 SCYL3Q8IZE3 742 aa4.24□□□□□ -1.73
NF1-220ENST00000581113 SLC5A8Q8N695 610 aa4.24□□□□□ -1.73
NF1-220ENST00000581113 NKAIN3Q8N8D7 197 aa4.24□□□□□ -1.73
NF1-220ENST00000581113 LSMEM1Q8N8F7 131 aa4.24□□□□□ -1.73
NF1-220ENST00000581113 PPP4R1Q8TF05 950 aa4.24□□□□□ -1.73
NF1-220ENST00000581113 TMEM255BQ8WV15 326 aa4.24□□□□□ -1.73
NF1-220ENST00000581113 FAM120BQ96EK7 910 aaKnown RBP4.24□□□□□ -1.73
NF1-220ENST00000581113 SAT2Q96F10 170 aaPredicted RBP4.24□□□□□ -1.73
NF1-220ENST00000581113 INPP4AQ96PE3 977 aaPredicted RBP4.24□□□□□ -1.73
NF1-220ENST00000581113 C1QTNF1Q9BXJ1 281 aa4.24□□□□□ -1.73
NF1-220ENST00000581113 GHITMQ9H3K2 345 aa4.24□□□□□ -1.73
NF1-220ENST00000581113 TCP11L1Q9NUJ3 509 aa4.24□□□□□ -1.73
NF1-220ENST00000581113 PAG1Q9NWQ8 432 aa4.24□□□□□ -1.73
NF1-220ENST00000581113 STK26Q9P289 416 aa4.24□□□□□ -1.73
NF1-220ENST00000581113 MARCH4Q9P2E8 410 aaPredicted RBP4.24□□□□□ -1.73
NF1-220ENST00000581113 VPS28Q9UK41 221 aa4.24□□□□□ -1.73
NF1-220ENST00000581113 DLGAP4Q9Y2H0 992 aa4.24□□□□□ -1.73
NF1-220ENST00000581113 LRPPRCP42704 1394 aaKnown RBP4.24□□□□□ -1.73
NF1-220ENST00000581113 PNPLA6Q8IY17 1366 aa4.24□□□□□ -1.73
NF1-220ENST00000581113 A0A1W2PP11 408 aa4.24□□□□□ -1.73
NF1-220ENST00000581113 A0A1W2PS18 150 aa4.24□□□□□ -1.73
NF1-220ENST00000581113 GTPBP10A4D1E9 387 aaKnown RBP4.24□□□□□ -1.73
NF1-220ENST00000581113 DVL1O14640 695 aa4.24□□□□□ -1.73
NF1-220ENST00000581113 CAPN9O14815 690 aa4.24□□□□□ -1.73
NF1-220ENST00000581113 HMMRO75330 724 aa4.24□□□□□ -1.73
NF1-220ENST00000581113 CRYAAP02489 173 aa4.24□□□□□ -1.73
NF1-220ENST00000581113 HRH2P25021 359 aa4.24□□□□□ -1.73
NF1-220ENST00000581113 HOXD13P35453 343 aa4.24□□□□□ -1.73
NF1-220ENST00000581113 ZNF131P52739 623 aa4.24□□□□□ -1.73
NF1-220ENST00000581113 DVL1P1P54792 670 aaPredicted RBP4.24□□□□□ -1.73
NF1-220ENST00000581113 MFAP4P55083 255 aa4.24□□□□□ -1.73
NF1-220ENST00000581113 CD81P60033 236 aa4.24□□□□□ -1.73
NF1-220ENST00000581113 RUNX1T1Q06455 604 aa4.24□□□□□ -1.73
NF1-220ENST00000581113 MEP1AQ16819 746 aa4.24□□□□□ -1.73
NF1-220ENST00000581113 RARS2Q5T160 578 aaKnown RBP4.24□□□□□ -1.73
NF1-220ENST00000581113 PDSS1Q5T2R2 415 aa4.24□□□□□ -1.73
NF1-220ENST00000581113 SZRD1Q7Z422 152 aa4.24□□□□□ -1.73
NF1-220ENST00000581113 ARID3BQ8IVW6 561 aaPredicted RBP4.24□□□□□ -1.73
NF1-220ENST00000581113 C17orf53Q8N3J3 647 aaPredicted RBP4.24□□□□□ -1.73
NF1-220ENST00000581113 SLC38A9Q8NBW4 561 aa4.24□□□□□ -1.73
NF1-220ENST00000581113 APPL2Q8NEU8 664 aa4.24□□□□□ -1.73
NF1-220ENST00000581113 OR52I2Q8NH67 350 aa4.24□□□□□ -1.73
NF1-220ENST00000581113 PHF21AQ96BD5 680 aa4.24□□□□□ -1.73
NF1-220ENST00000581113 LINGO1Q96FE5 620 aa4.24□□□□□ -1.73
NF1-220ENST00000581113 ZNF583Q96ND8 569 aa4.24□□□□□ -1.73
NF1-220ENST00000581113 XPO4Q9C0E2 1151 aaKnown RBP4.24□□□□□ -1.73
NF1-220ENST00000581113 RAD21L1Q9H4I0 556 aa4.24□□□□□ -1.73
NF1-220ENST00000581113 DNAJC18Q9H819 358 aa4.24□□□□□ -1.73
NF1-220ENST00000581113 FKRPQ9H9S5 495 aa4.24□□□□□ -1.73
NF1-220ENST00000581113 KLHL9Q9P2J3 617 aa4.24□□□□□ -1.73
NF1-220ENST00000581113 ADD3Q9UEY8 706 aaKnown RBP4.24□□□□□ -1.73
NF1-220ENST00000581113 TBC1D29Q9UFV1 150 aa4.24□□□□□ -1.73
NF1-220ENST00000581113 AFF2P51816 1311 aa4.23□□□□□ -1.73
NF1-220ENST00000581113 ABCC11Q96J66 1382 aa4.23□□□□□ -1.73
NF1-220ENST00000581113 RAB3GAP2Q9H2M9 1393 aa4.23□□□□□ -1.73
NF1-220ENST00000581113 SHPRHQ149N8 1683 aa4.23□□□□□ -1.73
NF1-220ENST00000581113 TECPR2O15040 1411 aa4.23□□□□□ -1.73
NF1-220ENST00000581113 PIK3C2GO75747 1445 aa4.23□□□□□ -1.73
NF1-220ENST00000581113 SETD1AO15047 1707 aaKnown RBP4.23□□□□□ -1.73
NF1-220ENST00000581113 NALCNQ8IZF0 1738 aa4.23□□□□□ -1.73
NF1-220ENST00000581113 PPLO60437 1756 aa4.23□□□□□ -1.73
NF1-220ENST00000581113 ZCWPW2A0A1B0GU75 182 aa4.23□□□□□ -1.73
NF1-220ENST00000581113 TRIM64CA6NLI5 447 aa4.23□□□□□ -1.73
NF1-220ENST00000581113 AGAP14A8MT82 685 aa4.23□□□□□ -1.73
NF1-220ENST00000581113 CDRT15L2A8MXV6 281 aa4.23□□□□□ -1.73
NF1-220ENST00000581113 B4DLN1 442 aa4.23□□□□□ -1.73
NF1-220ENST00000581113 TMEM189-UBE2V1I3L0A0 370 aa4.23□□□□□ -1.73
NF1-220ENST00000581113 BMPR1BO00238 502 aa4.23□□□□□ -1.73
NF1-220ENST00000581113 AHCYL1O43865 530 aa4.23□□□□□ -1.73
NF1-220ENST00000581113 LMX1BO60663 402 aa4.23□□□□□ -1.73
NF1-220ENST00000581113 ZNF217O75362 1048 aa4.23□□□□□ -1.73
NF1-220ENST00000581113 GCH1P30793 250 aa4.23□□□□□ -1.73
NF1-220ENST00000581113 MRPL12P52815 198 aaKnown RBP4.23□□□□□ -1.73
NF1-220ENST00000581113 PITX1P78337 314 aaPredicted RBP4.23□□□□□ -1.73
NF1-220ENST00000581113 PPP2R2BQ00005 443 aa4.23□□□□□ -1.73
NF1-220ENST00000581113 SPOCK1Q08629 439 aa4.23□□□□□ -1.73
NF1-220ENST00000581113 AIMP2Q13155 320 aaKnown RBP4.23□□□□□ -1.73
NF1-220ENST00000581113 UBE2V1Q13404 147 aa4.23□□□□□ -1.73
NF1-220ENST00000581113 MVPQ14764 893 aaKnown RBP4.23□□□□□ -1.73
NF1-220ENST00000581113 MEA1Q16626 185 aa4.23□□□□□ -1.73
NF1-220ENST00000581113 SLC10A5Q5PT55 438 aa4.23□□□□□ -1.73
NF1-220ENST00000581113 PLEKHM3Q6ZWE6 761 aa4.23□□□□□ -1.73
NF1-220ENST00000581113 FASTKD5Q7L8L6 764 aaKnown RBP4.23□□□□□ -1.73
NF1-220ENST00000581113 EPHX4Q8IUS5 362 aa4.23□□□□□ -1.73
NF1-220ENST00000581113 RPAP2Q8IXW5 612 aaPredicted RBP4.23□□□□□ -1.73
NF1-220ENST00000581113 GCSAMQ8N6F7 178 aa4.23□□□□□ -1.73
NF1-220ENST00000581113 OTUD6BQ8N6M0 293 aa4.23□□□□□ -1.73
NF1-220ENST00000581113 LMNTD1Q8N9Z9 388 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms