RNA–Protein interactions for RNA: ENST00000580745.5

PPP4R1-218, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 4

Gene PPP4R1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-218	ENST00000580745	BTN3A3	O00478	584 aa		10.83	□□□□□ -0.68
PPP4R1-218	ENST00000580745	DNAJB5	O75953	348 aa		10.83	□□□□□ -0.68
PPP4R1-218	ENST00000580745	IPO7	O95373	1038 aa	Known RBP	10.83	□□□□□ -0.68
PPP4R1-218	ENST00000580745	CCNYL3	P0C7X3	344 aa		10.83	□□□□□ -0.68
PPP4R1-218	ENST00000580745	ATP1B2	P14415	290 aa	Predicted RBP	10.83	□□□□□ -0.68
PPP4R1-218	ENST00000580745	PVR	P15151	417 aa		10.83	□□□□□ -0.68
PPP4R1-218	ENST00000580745	MC1R	Q01726	317 aa		10.83	□□□□□ -0.68
PPP4R1-218	ENST00000580745	PRKG2	Q13237	762 aa		10.83	□□□□□ -0.68
PPP4R1-218	ENST00000580745	KLF1	Q13351	362 aa	Predicted RBP	10.83	□□□□□ -0.68
PPP4R1-218	ENST00000580745	KRT33B	Q14525	404 aa		10.83	□□□□□ -0.68
PPP4R1-218	ENST00000580745	POU6F1	Q14863	301 aa		10.83	□□□□□ -0.68
PPP4R1-218	ENST00000580745	KCTD19	Q17RG1	926 aa	Predicted RBP	10.83	□□□□□ -0.68
PPP4R1-218	ENST00000580745	PARP6	Q2NL67	630 aa		10.83	□□□□□ -0.68
PPP4R1-218	ENST00000580745	ZNF658B	Q4V348	819 aa	Predicted RBP	10.83	□□□□□ -0.68
PPP4R1-218	ENST00000580745	CCDC38	Q502W7	563 aa		10.83	□□□□□ -0.68
PPP4R1-218	ENST00000580745	KLHL35	Q6PF15	583 aa		10.83	□□□□□ -0.68
PPP4R1-218	ENST00000580745	OOSP2	Q86WS3	158 aa		10.83	□□□□□ -0.68
PPP4R1-218	ENST00000580745	D2HGDH	Q8N465	521 aa		10.83	□□□□□ -0.68
PPP4R1-218	ENST00000580745	HM13	Q8TCT9	377 aa		10.83	□□□□□ -0.68
PPP4R1-218	ENST00000580745	ULK4	Q96C45	1275 aa		10.83	□□□□□ -0.68
PPP4R1-218	ENST00000580745	FERD3L	Q96RJ6	166 aa		10.83	□□□□□ -0.68
PPP4R1-218	ENST00000580745	BAG1	Q99933	345 aa	Predicted RBP	10.83	□□□□□ -0.68
PPP4R1-218	ENST00000580745	FERMT1	Q9BQL6	677 aa		10.83	□□□□□ -0.68
PPP4R1-218	ENST00000580745	TMEM121	Q9BTD3	319 aa		10.83	□□□□□ -0.68
PPP4R1-218	ENST00000580745	TRIM55	Q9BYV6	548 aa		10.83	□□□□□ -0.68
PPP4R1-218	ENST00000580745	TWSG1	Q9GZX9	223 aa		10.83	□□□□□ -0.68
PPP4R1-218	ENST00000580745	OR52A5	Q9H2C5	316 aa		10.83	□□□□□ -0.68
PPP4R1-218	ENST00000580745	COG4	Q9H9E3	785 aa		10.83	□□□□□ -0.68
PPP4R1-218	ENST00000580745	ARNT2	Q9HBZ2	717 aa		10.83	□□□□□ -0.68
PPP4R1-218	ENST00000580745	ZDHHC3	Q9NYG2	299 aa		10.83	□□□□□ -0.68
PPP4R1-218	ENST00000580745	TUBD1	Q9UJT1	453 aa		10.83	□□□□□ -0.68
PPP4R1-218	ENST00000580745	TP53TG5	Q9Y2B4	290 aa		10.83	□□□□□ -0.68
PPP4R1-218	ENST00000580745	TENM4	Q6N022	2769 aa		10.82	□□□□□ -0.68
PPP4R1-218	ENST00000580745	COL6A6	A6NMZ7	2263 aa		10.82	□□□□□ -0.68
PPP4R1-218	ENST00000580745	IGLV3-16	A0A075B6K0	115 aa		10.82	□□□□□ -0.68
PPP4R1-218	ENST00000580745	TRBV5-4	A0A0C4DH59	114 aa		10.82	□□□□□ -0.68
PPP4R1-218	ENST00000580745	GSAP	A4D1B5	854 aa		10.82	□□□□□ -0.68
PPP4R1-218	ENST00000580745	CREG1	O75629	220 aa		10.82	□□□□□ -0.68
PPP4R1-218	ENST00000580745	PDGFA	P04085	211 aa		10.82	□□□□□ -0.68
PPP4R1-218	ENST00000580745	PTMA	P06454	111 aa	Known RBP	10.82	□□□□□ -0.68
PPP4R1-218	ENST00000580745	RALB	P11234	206 aa		10.82	□□□□□ -0.68
PPP4R1-218	ENST00000580745	ACRV1	P26436	265 aa		10.82	□□□□□ -0.68
PPP4R1-218	ENST00000580745	CETN2	P41208	172 aa		10.82	□□□□□ -0.68
PPP4R1-218	ENST00000580745	GRIA1	P42261	906 aa		10.82	□□□□□ -0.68
PPP4R1-218	ENST00000580745	HSD11B2	P80365	405 aa		10.82	□□□□□ -0.68
PPP4R1-218	ENST00000580745	ACY1	Q03154	408 aa		10.82	□□□□□ -0.68
PPP4R1-218	ENST00000580745	ABR	Q12979	859 aa		10.82	□□□□□ -0.68
PPP4R1-218	ENST00000580745	CHAF1B	Q13112	559 aa		10.82	□□□□□ -0.68
PPP4R1-218	ENST00000580745	GPS2	Q13227	327 aa		10.82	□□□□□ -0.68
PPP4R1-218	ENST00000580745	BRD3	Q15059	726 aa		10.82	□□□□□ -0.68
PPP4R1-218	ENST00000580745	DBN1	Q16643	649 aa		10.82	□□□□□ -0.68
PPP4R1-218	ENST00000580745	CPZ	Q66K79	652 aa		10.82	□□□□□ -0.68
PPP4R1-218	ENST00000580745	ARMC6	Q6NXE6	501 aa		10.82	□□□□□ -0.68
PPP4R1-218	ENST00000580745	SPC24	Q8NBT2	197 aa		10.82	□□□□□ -0.68
PPP4R1-218	ENST00000580745	OR52E1	Q8NGJ3	308 aa		10.82	□□□□□ -0.68
PPP4R1-218	ENST00000580745	SLC35B2	Q8TB61	432 aa		10.82	□□□□□ -0.68
PPP4R1-218	ENST00000580745	ZNF501	Q96CX3	271 aa	Predicted RBP	10.82	□□□□□ -0.68
PPP4R1-218	ENST00000580745	CDKN2AIPNL	Q96HQ2	116 aa		10.82	□□□□□ -0.68
PPP4R1-218	ENST00000580745	HGH1	Q9BTY7	390 aa		10.82	□□□□□ -0.68
PPP4R1-218	ENST00000580745	ACTL8	Q9H568	366 aa		10.82	□□□□□ -0.68
PPP4R1-218	ENST00000580745	NLE1	Q9NVX2	485 aa	Predicted RBP	10.82	□□□□□ -0.68
PPP4R1-218	ENST00000580745	SOHLH2	Q9NX45	425 aa		10.82	□□□□□ -0.68
PPP4R1-218	ENST00000580745	PCDHB3	Q9Y5E6	796 aa		10.82	□□□□□ -0.68
PPP4R1-218	ENST00000580745	CAPN6	Q9Y6Q1	641 aa		10.82	□□□□□ -0.68
PPP4R1-218	ENST00000580745	GOLGA6L9	A6NEM1	432 aa		10.81	□□□□□ -0.68
PPP4R1-218	ENST00000580745	CFAP99	D6REC4	459 aa		10.81	□□□□□ -0.68
PPP4R1-218	ENST00000580745	BTN3A1	O00481	513 aa		10.81	□□□□□ -0.68
PPP4R1-218	ENST00000580745	ARHGAP6	O43182	974 aa		10.81	□□□□□ -0.68
PPP4R1-218	ENST00000580745	SCRG1	O75711	98 aa		10.81	□□□□□ -0.68
PPP4R1-218	ENST00000580745	ZBTB11	O95625	1053 aa	Predicted RBP	10.81	□□□□□ -0.68
PPP4R1-218	ENST00000580745	ATXN8OS	P0DMR3	200 aa		10.81	□□□□□ -0.68
PPP4R1-218	ENST00000580745	ETS1	P14921	441 aa		10.81	□□□□□ -0.68
PPP4R1-218	ENST00000580745	ST6GAL1	P15907	406 aa		10.81	□□□□□ -0.68
PPP4R1-218	ENST00000580745	CDH3	P22223	829 aa		10.81	□□□□□ -0.68
PPP4R1-218	ENST00000580745	HADHA	P40939	763 aa		10.81	□□□□□ -0.68
PPP4R1-218	ENST00000580745	LMAN1	P49257	510 aa		10.81	□□□□□ -0.68
PPP4R1-218	ENST00000580745	TUBB4B	P68371	445 aa		10.81	□□□□□ -0.68
PPP4R1-218	ENST00000580745	PDE1B	Q01064	536 aa		10.81	□□□□□ -0.68
PPP4R1-218	ENST00000580745	IL10RA	Q13651	578 aa		10.81	□□□□□ -0.68
PPP4R1-218	ENST00000580745	TUBB2A	Q13885	445 aa		10.81	□□□□□ -0.68
PPP4R1-218	ENST00000580745	CRTC2	Q53ET0	693 aa	Predicted RBP	10.81	□□□□□ -0.68
PPP4R1-218	ENST00000580745	LACTB2	Q53H82	288 aa	Predicted RBP	10.81	□□□□□ -0.68
PPP4R1-218	ENST00000580745	TRIM73	Q86UV7	250 aa		10.81	□□□□□ -0.68
PPP4R1-218	ENST00000580745	TMEM126B	Q8IUX1	230 aa		10.81	□□□□□ -0.68
PPP4R1-218	ENST00000580745	UBL4B	Q8N7F7	174 aa		10.81	□□□□□ -0.68
PPP4R1-218	ENST00000580745	LMNTD1	Q8N9Z9	388 aa		10.81	□□□□□ -0.68
PPP4R1-218	ENST00000580745	OR52K1	Q8NGK4	314 aa		10.81	□□□□□ -0.68
PPP4R1-218	ENST00000580745	OR1L3	Q8NH93	324 aa		10.81	□□□□□ -0.68
PPP4R1-218	ENST00000580745	LCN9	Q8WX39	176 aa		10.81	□□□□□ -0.68
PPP4R1-218	ENST00000580745	MR1	Q95460	341 aa		10.81	□□□□□ -0.68
PPP4R1-218	ENST00000580745	CD180	Q99467	661 aa		10.81	□□□□□ -0.68
PPP4R1-218	ENST00000580745	CCM2	Q9BSQ5	444 aa		10.81	□□□□□ -0.68
PPP4R1-218	ENST00000580745	TUBB2B	Q9BVA1	445 aa		10.81	□□□□□ -0.68
PPP4R1-218	ENST00000580745	CHST8	Q9H2A9	424 aa		10.81	□□□□□ -0.68
PPP4R1-218	ENST00000580745	SRMS	Q9H3Y6	488 aa		10.81	□□□□□ -0.68
PPP4R1-218	ENST00000580745	LRRC40	Q9H9A6	602 aa		10.81	□□□□□ -0.68
PPP4R1-218	ENST00000580745	KCND1	Q9NSA2	647 aa		10.81	□□□□□ -0.68
PPP4R1-218	ENST00000580745	SMARCAL1	Q9NZC9	954 aa		10.81	□□□□□ -0.68
PPP4R1-218	ENST00000580745	SLC2A6	Q9UGQ3	507 aa		10.81	□□□□□ -0.68
PPP4R1-218	ENST00000580745	KCND3	Q9UK17	655 aa		10.81	□□□□□ -0.68

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