RNA–Protein interactions for RNA: ENST00000580419.5

SMARCE1-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-216ENST00000580419 NAP1L1P55209 391 aaKnown RBP14.13□□□□□ -0.15
SMARCE1-216ENST00000580419 TUBB3Q13509 450 aa14.13□□□□□ -0.15
SMARCE1-216ENST00000580419 ITIH4Q14624 930 aa14.13□□□□□ -0.15
SMARCE1-216ENST00000580419 PLCL1Q15111 1095 aa14.13□□□□□ -0.15
SMARCE1-216ENST00000580419 TMTC4Q5T4D3 741 aa14.13□□□□□ -0.15
SMARCE1-216ENST00000580419 PACS1Q6VY07 963 aa14.13□□□□□ -0.15
SMARCE1-216ENST00000580419 ARHGEF18Q6ZSZ5 1173 aa14.13□□□□□ -0.15
SMARCE1-216ENST00000580419 FAM92BQ6ZTR7 304 aa14.13□□□□□ -0.15
SMARCE1-216ENST00000580419 TMEM139Q8IV31 216 aa14.13□□□□□ -0.15
SMARCE1-216ENST00000580419 THAP4Q8WY91 577 aa14.13□□□□□ -0.15
SMARCE1-216ENST00000580419 C12orf66Q96MD2 445 aa14.13□□□□□ -0.15
SMARCE1-216ENST00000580419 MAP3K3Q99759 626 aa14.13□□□□□ -0.15
SMARCE1-216ENST00000580419 PITPNM3Q9BZ71 974 aa14.13□□□□□ -0.15
SMARCE1-216ENST00000580419 WWP1Q9H0M0 922 aa14.13□□□□□ -0.15
SMARCE1-216ENST00000580419 OR52A5Q9H2C5 316 aa14.13□□□□□ -0.15
SMARCE1-216ENST00000580419 POMT2Q9UKY4 750 aa14.13□□□□□ -0.15
SMARCE1-216ENST00000580419 POLHQ9Y253 713 aa14.13□□□□□ -0.15
SMARCE1-216ENST00000580419 KCNMB2Q9Y691 235 aa14.13□□□□□ -0.15
SMARCE1-216ENST00000580419 ANKRD12Q6UB98 2062 aa14.13□□□□□ -0.15
SMARCE1-216ENST00000580419 MED13Q9UHV7 2174 aa14.12□□□□□ -0.15
SMARCE1-216ENST00000580419 UBA6A0AVT1 1052 aaPredicted RBP14.12□□□□□ -0.15
SMARCE1-216ENST00000580419 MACROD2A1Z1Q3 448 aa14.12□□□□□ -0.15
SMARCE1-216ENST00000580419 F8W8V4 182 aa14.12□□□□□ -0.15
SMARCE1-216ENST00000580419 HAX1O00165 279 aa14.12□□□□□ -0.15
SMARCE1-216ENST00000580419 DDX3YO15523 660 aaKnown RBP14.12□□□□□ -0.15
SMARCE1-216ENST00000580419 CREG1O75629 220 aa14.12□□□□□ -0.15
SMARCE1-216ENST00000580419 FOLR1P15328 257 aa14.12□□□□□ -0.15
SMARCE1-216ENST00000580419 ACRV1P26436 265 aa14.12□□□□□ -0.15
SMARCE1-216ENST00000580419 CASRP41180 1078 aa14.12□□□□□ -0.15
SMARCE1-216ENST00000580419 GSDMDP57764 484 aa14.12□□□□□ -0.15
SMARCE1-216ENST00000580419 CACNG1Q06432 222 aa14.12□□□□□ -0.15
SMARCE1-216ENST00000580419 PTPRCAPQ14761 206 aa14.12□□□□□ -0.15
SMARCE1-216ENST00000580419 SKIDA1Q1XH10 827 aa14.12□□□□□ -0.15
SMARCE1-216ENST00000580419 LYPLAL1Q5VWZ2 237 aa14.12□□□□□ -0.15
SMARCE1-216ENST00000580419 IZUMO3Q5VZ72 239 aa14.12□□□□□ -0.15
SMARCE1-216ENST00000580419 TCTN3Q6NUS6 607 aa14.12□□□□□ -0.15
SMARCE1-216ENST00000580419 PRICKLE2Q7Z3G6 844 aa14.12□□□□□ -0.15
SMARCE1-216ENST00000580419 KIAA1328Q86T90 577 aa14.12□□□□□ -0.15
SMARCE1-216ENST00000580419 GALNT6Q8NCL4 622 aa14.12□□□□□ -0.15
SMARCE1-216ENST00000580419 OR13C4Q8NGS5 318 aa14.12□□□□□ -0.15
SMARCE1-216ENST00000580419 C9orf43Q8TAL5 461 aaPredicted RBP14.12□□□□□ -0.15
SMARCE1-216ENST00000580419 CDKN2AIPNLQ96HQ2 116 aa14.12□□□□□ -0.15
SMARCE1-216ENST00000580419 RMDN2Q96LZ7 410 aa14.12□□□□□ -0.15
SMARCE1-216ENST00000580419 CROTQ9UKG9 612 aa14.12□□□□□ -0.15
SMARCE1-216ENST00000580419 PSMD13Q9UNM6 376 aa14.12□□□□□ -0.15
SMARCE1-216ENST00000580419 IFRD1O00458 451 aaPredicted RBP14.11□□□□□ -0.15
SMARCE1-216ENST00000580419 LIN7AO14910 233 aaPredicted RBP14.11□□□□□ -0.15
SMARCE1-216ENST00000580419 CPNE3O75131 537 aaKnown RBP14.11□□□□□ -0.15
SMARCE1-216ENST00000580419 SUN1O94901 812 aa14.11□□□□□ -0.15
SMARCE1-216ENST00000580419 RAB40ALP0C0E4 278 aa14.11□□□□□ -0.15
SMARCE1-216ENST00000580419 F8A1P23610 371 aa14.11□□□□□ -0.15
SMARCE1-216ENST00000580419 NSG1P42857 185 aa14.11□□□□□ -0.15
SMARCE1-216ENST00000580419 ARL4DP49703 201 aa14.11□□□□□ -0.15
SMARCE1-216ENST00000580419 PRKAA1Q13131 559 aa14.11□□□□□ -0.15
SMARCE1-216ENST00000580419 DNASE1L3Q13609 305 aa14.11□□□□□ -0.15
SMARCE1-216ENST00000580419 PWWP2BQ6NUJ5 590 aa14.11□□□□□ -0.15
SMARCE1-216ENST00000580419 ARMC6Q6NXE6 501 aa14.11□□□□□ -0.15
SMARCE1-216ENST00000580419 CERS6Q6ZMG9 384 aa14.11□□□□□ -0.15
SMARCE1-216ENST00000580419 SYVN1Q86TM6 617 aa14.11□□□□□ -0.15
SMARCE1-216ENST00000580419 CFAP206Q8IYR0 622 aa14.11□□□□□ -0.15
SMARCE1-216ENST00000580419 UNC5BQ8IZJ1 945 aa14.11□□□□□ -0.15
SMARCE1-216ENST00000580419 PIP4P2Q8N4L2 257 aa14.11□□□□□ -0.15
SMARCE1-216ENST00000580419 ZNF501Q96CX3 271 aaPredicted RBP14.11□□□□□ -0.15
SMARCE1-216ENST00000580419 DPH2Q9BQC3 489 aaPredicted RBP14.11□□□□□ -0.15
SMARCE1-216ENST00000580419 APOL2Q9BQE5 337 aa14.11□□□□□ -0.15
SMARCE1-216ENST00000580419 RBSNQ9H1K0 784 aa14.11□□□□□ -0.15
SMARCE1-216ENST00000580419 C10orf88Q9H8K7 445 aa14.11□□□□□ -0.15
SMARCE1-216ENST00000580419 COG4Q9H9E3 785 aa14.11□□□□□ -0.15
SMARCE1-216ENST00000580419 KCND1Q9NSA2 647 aa14.11□□□□□ -0.15
SMARCE1-216ENST00000580419 TRIM10Q9UDY6 481 aa14.11□□□□□ -0.15
SMARCE1-216ENST00000580419 LNPEPQ9UIQ6 1025 aa14.11□□□□□ -0.15
SMARCE1-216ENST00000580419 DOPEY2Q9Y3R5 2298 aa14.11□□□□□ -0.15
SMARCE1-216ENST00000580419 F5H423 210 aaPredicted RBP14.1□□□□□ -0.15
SMARCE1-216ENST00000580419 MKRN2OSH3BPM6 223 aa14.1□□□□□ -0.15
SMARCE1-216ENST00000580419 MAP3K7O43318 606 aa14.1□□□□□ -0.15
SMARCE1-216ENST00000580419 PTPN4P29074 926 aa14.1□□□□□ -0.15
SMARCE1-216ENST00000580419 MC4RP32245 332 aa14.1□□□□□ -0.15
SMARCE1-216ENST00000580419 PMS2P54278 862 aa14.1□□□□□ -0.15
SMARCE1-216ENST00000580419 ACVR1Q04771 509 aa14.1□□□□□ -0.15
SMARCE1-216ENST00000580419 BOP1Q14137 746 aaKnown RBP14.1□□□□□ -0.15
SMARCE1-216ENST00000580419 ARMC3Q5W041 872 aa14.1□□□□□ -0.15
SMARCE1-216ENST00000580419 DET1Q7L5Y6 550 aa14.1□□□□□ -0.15
SMARCE1-216ENST00000580419 NLRP9Q7RTR0 991 aa14.1□□□□□ -0.15
SMARCE1-216ENST00000580419 SERPINA9Q86WD7 417 aa14.1□□□□□ -0.15
SMARCE1-216ENST00000580419 FAM71DQ8N9W8 422 aa14.1□□□□□ -0.15
SMARCE1-216ENST00000580419 ACRBPQ8NEB7 543 aa14.1□□□□□ -0.15
SMARCE1-216ENST00000580419 SPDYE1Q8NFV5 336 aaPredicted RBP14.1□□□□□ -0.15
SMARCE1-216ENST00000580419 DNAJC1Q96KC8 554 aaKnown RBP14.1□□□□□ -0.15
SMARCE1-216ENST00000580419 RANBP9Q96S59 729 aa14.1□□□□□ -0.15
SMARCE1-216ENST00000580419 TTC1Q99614 292 aa14.1□□□□□ -0.15
SMARCE1-216ENST00000580419 TSGA10Q9BZW7 698 aa14.1□□□□□ -0.15
SMARCE1-216ENST00000580419 FANCEQ9HB96 536 aa14.1□□□□□ -0.15
SMARCE1-216ENST00000580419 RELNP78509 3460 aa14.1□□□□□ -0.15
SMARCE1-216ENST00000580419 OR6C74A6NCV1 312 aa14.09□□□□□ -0.15
SMARCE1-216ENST00000580419 METTL18O95568 372 aa14.09□□□□□ -0.15
SMARCE1-216ENST00000580419 FTH1P02794 183 aa14.09□□□□□ -0.15
SMARCE1-216ENST00000580419 PTMAP06454 111 aaKnown RBP14.09□□□□□ -0.15
SMARCE1-216ENST00000580419 FDFT1P37268 417 aa14.09□□□□□ -0.15
SMARCE1-216ENST00000580419 KPNA2P52292 529 aaKnown RBP14.09□□□□□ -0.15
SMARCE1-216ENST00000580419 PPP1CAP62136 330 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms