RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 C9J4A7 227 aa17.42■□□□□ 0.38
MKS1-209ENST00000580127 IFRD1O00458 451 aaPredicted RBP17.42■□□□□ 0.38
MKS1-209ENST00000580127 PSTPIP1O43586 416 aa17.42■□□□□ 0.38
MKS1-209ENST00000580127 BUD23O43709 281 aaKnown RBP17.42■□□□□ 0.38
MKS1-209ENST00000580127 CRTAMO95727 393 aa17.42■□□□□ 0.38
MKS1-209ENST00000580127 IGHEP01854 428 aa17.42■□□□□ 0.38
MKS1-209ENST00000580127 POLR2CP19387 275 aaPredicted RBP17.42■□□□□ 0.38
MKS1-209ENST00000580127 COMTP21964 271 aa17.42■□□□□ 0.38
MKS1-209ENST00000580127 CHRNA4P43681 627 aa17.42■□□□□ 0.38
MKS1-209ENST00000580127 VAV2P52735 878 aa17.42■□□□□ 0.38
MKS1-209ENST00000580127 CHAF1BQ13112 559 aa17.42■□□□□ 0.38
MKS1-209ENST00000580127 PRPSAP1Q14558 356 aa17.42■□□□□ 0.38
MKS1-209ENST00000580127 NOMO1Q15155 1222 aa17.42■□□□□ 0.38
MKS1-209ENST00000580127 INPP5JQ15735 1006 aaPredicted RBP17.42■□□□□ 0.38
MKS1-209ENST00000580127 BCL7AQ4VC05 210 aa17.42■□□□□ 0.38
MKS1-209ENST00000580127 PLEKHS1Q5SXH7 462 aa17.42■□□□□ 0.38
MKS1-209ENST00000580127 FAM182AQ5T1J6 154 aa17.42■□□□□ 0.38
MKS1-209ENST00000580127 CCDC181Q5TID7 509 aa17.42■□□□□ 0.38
MKS1-209ENST00000580127 ITPRIPL1Q6GPH6 555 aa17.42■□□□□ 0.38
MKS1-209ENST00000580127 CERS6Q6ZMG9 384 aa17.42■□□□□ 0.38
MKS1-209ENST00000580127 RAB43Q86YS6 212 aa17.42■□□□□ 0.38
MKS1-209ENST00000580127 ZNF567Q8N184 647 aa17.42■□□□□ 0.38
MKS1-209ENST00000580127 ENDOVQ8N8Q3 282 aaKnown RBP17.42■□□□□ 0.38
MKS1-209ENST00000580127 N4BP2L2Q92802 583 aaPredicted RBP17.42■□□□□ 0.38
MKS1-209ENST00000580127 LINC00615Q96LM1 132 aaPredicted RBP17.42■□□□□ 0.38
MKS1-209ENST00000580127 FERD3LQ96RJ6 166 aa17.42■□□□□ 0.38
MKS1-209ENST00000580127 RUFY1Q96T51 708 aa17.42■□□□□ 0.38
MKS1-209ENST00000580127 ACTR5Q9H9F9 607 aaPredicted RBP17.42■□□□□ 0.38
MKS1-209ENST00000580127 NHEJ1Q9H9Q4 299 aaPredicted RBP17.42■□□□□ 0.38
MKS1-209ENST00000580127 FAM8A1Q9UBU6 413 aa17.42■□□□□ 0.38
MKS1-209ENST00000580127 AAR2Q9Y312 384 aaKnown RBP17.42■□□□□ 0.38
MKS1-209ENST00000580127 NOTCH2Q04721 2471 aa17.42■□□□□ 0.38
MKS1-209ENST00000580127 C17orf113A0A1B0GUU1 675 aa17.41■□□□□ 0.38
MKS1-209ENST00000580127 GSAPA4D1B5 854 aa17.41■□□□□ 0.38
MKS1-209ENST00000580127 ZNF185O15231 689 aa17.41■□□□□ 0.38
MKS1-209ENST00000580127 CEACAM4O75871 244 aa17.41■□□□□ 0.38
MKS1-209ENST00000580127 SRP72O76094 671 aaKnown RBP17.41■□□□□ 0.38
MKS1-209ENST00000580127 STK10O94804 968 aaKnown RBP17.41■□□□□ 0.38
MKS1-209ENST00000580127 MSL3P1P0C860 447 aa17.41■□□□□ 0.38
MKS1-209ENST00000580127 PTGIRP43119 386 aa17.41■□□□□ 0.38
MKS1-209ENST00000580127 UQCRFS1P47985 274 aa17.41■□□□□ 0.38
MKS1-209ENST00000580127 KPNA2P52292 529 aaKnown RBP17.41■□□□□ 0.38
MKS1-209ENST00000580127 IL10RAQ13651 578 aa17.41■□□□□ 0.38
MKS1-209ENST00000580127 TCEAL1Q15170 157 aa17.41■□□□□ 0.38
MKS1-209ENST00000580127 TAZQ16635 292 aa17.41■□□□□ 0.38
MKS1-209ENST00000580127 CPZQ66K79 652 aa17.41■□□□□ 0.38
MKS1-209ENST00000580127 JMJD6Q6NYC1 403 aaPredicted RBP17.41■□□□□ 0.38
MKS1-209ENST00000580127 SPOCD1Q6ZMY3 1216 aa17.41■□□□□ 0.38
MKS1-209ENST00000580127 CCDC50Q8IVM0 306 aa17.41■□□□□ 0.38
MKS1-209ENST00000580127 GPR135Q8IZ08 494 aa17.41■□□□□ 0.38
MKS1-209ENST00000580127 SGSM3Q96HU1 749 aa17.41■□□□□ 0.38
MKS1-209ENST00000580127 PPP1R2P1Q96PQ5 205 aa17.41■□□□□ 0.38
MKS1-209ENST00000580127 TLR10Q9BXR5 811 aa17.41■□□□□ 0.38
MKS1-209ENST00000580127 GPR83Q9NYM4 423 aa17.41■□□□□ 0.38
MKS1-209ENST00000580127 C5AR2Q9P296 337 aa17.41■□□□□ 0.38
MKS1-209ENST00000580127 CRLS1Q9UJA2 301 aa17.41■□□□□ 0.38
MKS1-209ENST00000580127 CCDC66A2RUB6 948 aa17.4■□□□□ 0.38
MKS1-209ENST00000580127 TMEM150CB9EJG8 249 aa17.4■□□□□ 0.38
MKS1-209ENST00000580127 AGTP01019 485 aa17.4■□□□□ 0.38
MKS1-209ENST00000580127 SPTBP11277 2137 aa17.4■□□□□ 0.38
MKS1-209ENST00000580127 HADHAP40939 763 aa17.4■□□□□ 0.38
MKS1-209ENST00000580127 SLC38A9Q8NBW4 561 aa17.4■□□□□ 0.38
MKS1-209ENST00000580127 SPDYE1Q8NFV5 336 aaPredicted RBP17.4■□□□□ 0.38
MKS1-209ENST00000580127 OR4K2Q8NGD2 314 aa17.4■□□□□ 0.38
MKS1-209ENST00000580127 HM13Q8TCT9 377 aa17.4■□□□□ 0.38
MKS1-209ENST00000580127 PNPLA2Q96AD5 504 aa17.4■□□□□ 0.38
MKS1-209ENST00000580127 OXNAD1Q96HP4 312 aaPredicted RBP17.4■□□□□ 0.38
MKS1-209ENST00000580127 COPS8Q99627 209 aa17.4■□□□□ 0.38
MKS1-209ENST00000580127 C19orf43Q9BQ61 176 aa17.4■□□□□ 0.38
MKS1-209ENST00000580127 DHRS4Q9BTZ2 278 aa17.4■□□□□ 0.38
MKS1-209ENST00000580127 MVB12BQ9H7P6 319 aa17.4■□□□□ 0.38
MKS1-209ENST00000580127 SPTLC3Q9NUV7 552 aa17.4■□□□□ 0.38
MKS1-209ENST00000580127 POMT2Q9UKY4 750 aa17.4■□□□□ 0.38
MKS1-209ENST00000580127 TEX15Q9BXT5 2789 aa17.4■□□□□ 0.38
MKS1-209ENST00000580127 PRRC2CQ9Y520 2896 aaKnown RBP17.4■□□□□ 0.38
MKS1-209ENST00000580127 UTP20O75691 2785 aaKnown RBP17.39■□□□□ 0.37
MKS1-209ENST00000580127 A6NL46 340 aa17.39■□□□□ 0.37
MKS1-209ENST00000580127 C2orf74A8MZ97 194 aa17.39■□□□□ 0.37
MKS1-209ENST00000580127 E7EQ34 232 aa17.39■□□□□ 0.37
MKS1-209ENST00000580127 F5H423 210 aaPredicted RBP17.39■□□□□ 0.37
MKS1-209ENST00000580127 H7C0C1 242 aa17.39■□□□□ 0.37
MKS1-209ENST00000580127 SORBS2O94875 1100 aaKnown RBP17.39■□□□□ 0.37
MKS1-209ENST00000580127 ALPPP05187 535 aa17.39■□□□□ 0.37
MKS1-209ENST00000580127 PECAM1P16284 738 aaPredicted RBP17.39■□□□□ 0.37
MKS1-209ENST00000580127 ITGALP20701 1170 aa17.39■□□□□ 0.37
MKS1-209ENST00000580127 PRDX3P30048 256 aaKnown RBP17.39■□□□□ 0.37
MKS1-209ENST00000580127 ATP5OP48047 213 aa17.39■□□□□ 0.37
MKS1-209ENST00000580127 ARCN1P48444 511 aaKnown RBP17.39■□□□□ 0.37
MKS1-209ENST00000580127 CD151P48509 253 aa17.39■□□□□ 0.37
MKS1-209ENST00000580127 ITGA1P56199 1179 aa17.39■□□□□ 0.37
MKS1-209ENST00000580127 LAMB3Q13751 1172 aa17.39■□□□□ 0.37
MKS1-209ENST00000580127 SARM1Q6SZW1 724 aa17.39■□□□□ 0.37
MKS1-209ENST00000580127 SYTL1Q8IYJ3 562 aa17.39■□□□□ 0.37
MKS1-209ENST00000580127 GLIS1Q8NBF1 620 aa17.39■□□□□ 0.37
MKS1-209ENST00000580127 ADAMTS17Q8TE56 1095 aa17.39■□□□□ 0.37
MKS1-209ENST00000580127 RBM41Q96IZ5 413 aaKnown RBP17.39■□□□□ 0.37
MKS1-209ENST00000580127 FER1L6-AS2Q96M78 137 aa17.39■□□□□ 0.37
MKS1-209ENST00000580127 CASS4Q9NQ75 786 aa17.39■□□□□ 0.37
MKS1-209ENST00000580127 GPN3Q9UHW5 284 aaPredicted RBP17.39■□□□□ 0.37
MKS1-209ENST00000580127 HYOU1Q9Y4L1 999 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms