RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 CDRT15Q96T59 188 aa2.42□□□□□ -2.02
COPS3-213ENST00000577210 GFI1Q99684 422 aa2.42□□□□□ -2.02
COPS3-213ENST00000577210 EGFL8Q99944 293 aa2.42□□□□□ -2.02
COPS3-213ENST00000577210 DESI2Q9BSY9 194 aa2.42□□□□□ -2.02
COPS3-213ENST00000577210 POLR3CQ9BUI4 534 aaPredicted RBP2.42□□□□□ -2.02
COPS3-213ENST00000577210 CCDC106Q9BWC9 280 aa2.42□□□□□ -2.02
COPS3-213ENST00000577210 RAB6CQ9H0N0 254 aa2.42□□□□□ -2.02
COPS3-213ENST00000577210 OR10A4Q9H209 315 aa2.42□□□□□ -2.02
COPS3-213ENST00000577210 UPF2Q9HAU5 1272 aaKnown RBP2.42□□□□□ -2.02
COPS3-213ENST00000577210 APOBEC3GQ9HC16 384 aaKnown RBP2.42□□□□□ -2.02
COPS3-213ENST00000577210 SPHK1Q9NYA1 384 aa2.42□□□□□ -2.02
COPS3-213ENST00000577210 KCNG2Q9UJ96 466 aa2.42□□□□□ -2.02
COPS3-213ENST00000577210 ZNF112Q9UJU3 913 aa2.42□□□□□ -2.02
COPS3-213ENST00000577210 ANAPC2Q9UJX6 822 aa2.42□□□□□ -2.02
COPS3-213ENST00000577210 RALYQ9UKM9 306 aaKnown RBP2.42□□□□□ -2.02
COPS3-213ENST00000577210 PADI3Q9ULW8 664 aa2.42□□□□□ -2.02
COPS3-213ENST00000577210 ICAM5Q9UMF0 924 aa2.42□□□□□ -2.02
COPS3-213ENST00000577210 OR2W1Q9Y3N9 320 aa2.42□□□□□ -2.02
COPS3-213ENST00000577210 ZNF711Q9Y462 761 aa2.42□□□□□ -2.02
COPS3-213ENST00000577210 TMEM178BH3BS89 294 aa2.41□□□□□ -2.02
COPS3-213ENST00000577210 ADAMDEC1O15204 470 aa2.41□□□□□ -2.02
COPS3-213ENST00000577210 ADAM20O43506 726 aa2.41□□□□□ -2.02
COPS3-213ENST00000577210 PLPP2O43688 288 aa2.41□□□□□ -2.02
COPS3-213ENST00000577210 RNASEH1O60930 286 aaKnown RBP2.41□□□□□ -2.02
COPS3-213ENST00000577210 KCNK5O95279 499 aa2.41□□□□□ -2.02
COPS3-213ENST00000577210 TUBBP07437 444 aa2.41□□□□□ -2.02
COPS3-213ENST00000577210 PRSS1P07477 247 aa2.41□□□□□ -2.02
COPS3-213ENST00000577210 HSP90AB1P08238 724 aaKnown RBP2.41□□□□□ -2.02
COPS3-213ENST00000577210 CCDC175P0C221 793 aa2.41□□□□□ -2.02
COPS3-213ENST00000577210 FGF5P12034 268 aa2.41□□□□□ -2.02
COPS3-213ENST00000577210 HLA-DOBP13765 273 aa2.41□□□□□ -2.02
COPS3-213ENST00000577210 PAX1P15863 534 aa2.41□□□□□ -2.02
COPS3-213ENST00000577210 OAS2P29728 719 aaKnown RBP2.41□□□□□ -2.02
COPS3-213ENST00000577210 PCGF2P35227 344 aa2.41□□□□□ -2.02
COPS3-213ENST00000577210 RAB28P51157 221 aa2.41□□□□□ -2.02
COPS3-213ENST00000577210 ALDH3A2P51648 485 aa2.41□□□□□ -2.02
COPS3-213ENST00000577210 SUOXP51687 545 aa2.41□□□□□ -2.02
COPS3-213ENST00000577210 ZNF132P52740 706 aa2.41□□□□□ -2.02
COPS3-213ENST00000577210 CSE1LP55060 971 aaKnown RBP2.41□□□□□ -2.02
COPS3-213ENST00000577210 CD81P60033 236 aa2.41□□□□□ -2.02
COPS3-213ENST00000577210 ERVFC1-1P60608 527 aa2.41□□□□□ -2.02
COPS3-213ENST00000577210 PHEXP78562 749 aa2.41□□□□□ -2.02
COPS3-213ENST00000577210 PPP2R2BQ00005 443 aa2.41□□□□□ -2.02
COPS3-213ENST00000577210 PPARDQ03181 441 aa2.41□□□□□ -2.02
COPS3-213ENST00000577210 DMP1Q13316 513 aaPredicted RBP2.41□□□□□ -2.02
COPS3-213ENST00000577210 MFAP5Q13361 173 aa2.41□□□□□ -2.02
COPS3-213ENST00000577210 SNTB1Q13884 538 aaKnown RBP2.41□□□□□ -2.02
COPS3-213ENST00000577210 PTPRCAPQ14761 206 aa2.41□□□□□ -2.02
COPS3-213ENST00000577210 SIRPB2Q5JXA9 342 aa2.41□□□□□ -2.02
COPS3-213ENST00000577210 DENND5BQ6ZUT9 1274 aa2.41□□□□□ -2.02
COPS3-213ENST00000577210 C9orf139Q6ZV77 190 aa2.41□□□□□ -2.02
COPS3-213ENST00000577210 DET1Q7L5Y6 550 aa2.41□□□□□ -2.02
COPS3-213ENST00000577210 CCDC186Q7Z3E2 898 aa2.41□□□□□ -2.02
COPS3-213ENST00000577210 GALNTL5Q7Z4T8 443 aa2.41□□□□□ -2.02
COPS3-213ENST00000577210 SATL1Q86VE3 508 aa2.41□□□□□ -2.02
COPS3-213ENST00000577210 CEP57Q86XR8 500 aa2.41□□□□□ -2.02
COPS3-213ENST00000577210 PTOV1Q86YD1 416 aa2.41□□□□□ -2.02
COPS3-213ENST00000577210 OR13A1Q8NGR1 328 aa2.41□□□□□ -2.02
COPS3-213ENST00000577210 OR52I2Q8NH67 350 aa2.41□□□□□ -2.02
COPS3-213ENST00000577210 BBS10Q8TAM1 723 aa2.41□□□□□ -2.02
COPS3-213ENST00000577210 LMO3Q8TAP4 145 aa2.41□□□□□ -2.02
COPS3-213ENST00000577210 HDAC11Q96DB2 347 aa2.41□□□□□ -2.02
COPS3-213ENST00000577210 SPATA17Q96L03 361 aa2.41□□□□□ -2.02
COPS3-213ENST00000577210 PRMT6Q96LA8 375 aaPredicted RBP2.41□□□□□ -2.02
COPS3-213ENST00000577210 ZNF583Q96ND8 569 aa2.41□□□□□ -2.02
COPS3-213ENST00000577210 UHRF2Q96PU4 802 aa2.41□□□□□ -2.02
COPS3-213ENST00000577210 RAB3IPQ96QF0 476 aaPredicted RBP2.41□□□□□ -2.02
COPS3-213ENST00000577210 CTAGE1Q96RT6 745 aa2.41□□□□□ -2.02
COPS3-213ENST00000577210 BTBD10Q9BSF8 475 aa2.41□□□□□ -2.02
COPS3-213ENST00000577210 LMF2Q9BU23 707 aaKnown RBP2.41□□□□□ -2.02
COPS3-213ENST00000577210 MTMR12Q9C0I1 747 aa2.41□□□□□ -2.02
COPS3-213ENST00000577210 MIS12Q9H081 205 aa2.41□□□□□ -2.02
COPS3-213ENST00000577210 ANKZF1Q9H8Y5 726 aa2.41□□□□□ -2.02
COPS3-213ENST00000577210 ERVMER34-1Q9H9K5 563 aa2.41□□□□□ -2.02
COPS3-213ENST00000577210 ZNF556Q9HAH1 456 aa2.41□□□□□ -2.02
COPS3-213ENST00000577210 OLFML3Q9NRN5 406 aa2.41□□□□□ -2.02
COPS3-213ENST00000577210 MIOSQ9NXC5 875 aa2.41□□□□□ -2.02
COPS3-213ENST00000577210 OSGIN1Q9UJX0 560 aa2.41□□□□□ -2.02
COPS3-213ENST00000577210 ZNF580Q9UK33 172 aa2.41□□□□□ -2.02
COPS3-213ENST00000577210 KCNS2Q9ULS6 477 aa2.41□□□□□ -2.02
COPS3-213ENST00000577210 TCF19Q9Y242 345 aa2.41□□□□□ -2.02
COPS3-213ENST00000577210 TRPV2Q9Y5S1 764 aa2.41□□□□□ -2.02
COPS3-213ENST00000577210 TNFSF12-TNFSF13A0A0A6YY99 330 aa2.4□□□□□ -2.03
COPS3-213ENST00000577210 A0A0G2JLW4 131 aa2.4□□□□□ -2.03
COPS3-213ENST00000577210 EDDM13A0A1B0GTR0 161 aa2.4□□□□□ -2.03
COPS3-213ENST00000577210 A0A1W2PN81 502 aa2.4□□□□□ -2.03
COPS3-213ENST00000577210 TRBC2A0A5B9 178 aa2.4□□□□□ -2.03
COPS3-213ENST00000577210 CTAGE9A4FU28 777 aa2.4□□□□□ -2.03
COPS3-213ENST00000577210 URADA6NGE7 173 aa2.4□□□□□ -2.03
COPS3-213ENST00000577210 PRAC2D3DTV9 90 aa2.4□□□□□ -2.03
COPS3-213ENST00000577210 PLK4O00444 970 aa2.4□□□□□ -2.03
COPS3-213ENST00000577210 CLIC2O15247 247 aa2.4□□□□□ -2.03
COPS3-213ENST00000577210 CTSVO60911 334 aa2.4□□□□□ -2.03
COPS3-213ENST00000577210 BAG4O95429 457 aaKnown RBP2.4□□□□□ -2.03
COPS3-213ENST00000577210 C22orf31O95567 290 aa2.4□□□□□ -2.03
COPS3-213ENST00000577210 TRUB2O95900 331 aaKnown RBP2.4□□□□□ -2.03
COPS3-213ENST00000577210 CRYAAP02489 173 aa2.4□□□□□ -2.03
COPS3-213ENST00000577210 RPN1P04843 607 aaKnown RBP2.4□□□□□ -2.03
COPS3-213ENST00000577210 LIPFP07098 398 aa2.4□□□□□ -2.03
COPS3-213ENST00000577210 INHBAP08476 426 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms