RNA–Protein interactions for RNA: ENST00000576019.5

VPS53-219, Transcript of VPS53, GARP complex subunit, humanhuman

TSL 3

Gene VPS53, Length 613 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53-219ENST00000576019 RPS19P39019 145 aaKnown RBP5.73□□□□□ -1.49
VPS53-219ENST00000576019 RHAGQ02094 409 aa5.73□□□□□ -1.49
VPS53-219ENST00000576019 MESP2Q0VG99 397 aa5.73□□□□□ -1.49
VPS53-219ENST00000576019 TRA2AQ13595 282 aaKnown RBP eCLIP5.73□□□□□ -1.49
VPS53-219ENST00000576019 ZNF618Q5T7W0 954 aa5.73□□□□□ -1.49
VPS53-219ENST00000576019 TEDDM1Q5T9Z0 273 aa5.73□□□□□ -1.49
VPS53-219ENST00000576019 SFMBT2Q5VUG0 894 aa5.73□□□□□ -1.49
VPS53-219ENST00000576019 FAM91A1Q658Y4 838 aa5.73□□□□□ -1.49
VPS53-219ENST00000576019 SP5Q6BEB4 398 aaPredicted RBP5.73□□□□□ -1.49
VPS53-219ENST00000576019 APOBEC3HQ6NTF7 200 aaKnown RBP5.73□□□□□ -1.49
VPS53-219ENST00000576019 TEX38Q6PEX7 206 aa5.73□□□□□ -1.49
VPS53-219ENST00000576019 GDF7Q7Z4P5 450 aa5.73□□□□□ -1.49
VPS53-219ENST00000576019 ATG4DQ86TL0 474 aaPredicted RBP5.73□□□□□ -1.49
VPS53-219ENST00000576019 ADIPOR2Q86V24 386 aa5.73□□□□□ -1.49
VPS53-219ENST00000576019 ZNF761Q86XN6 746 aaPredicted RBP5.73□□□□□ -1.49
VPS53-219ENST00000576019 ANKRD13BQ86YJ7 626 aa5.73□□□□□ -1.49
VPS53-219ENST00000576019 ARID3BQ8IVW6 561 aaPredicted RBP5.73□□□□□ -1.49
VPS53-219ENST00000576019 RNF168Q8IYW5 571 aaPredicted RBP5.73□□□□□ -1.49
VPS53-219ENST00000576019 ABI1Q8IZP0 508 aa5.73□□□□□ -1.49
VPS53-219ENST00000576019 TMEM217Q8N7C4 229 aa5.73□□□□□ -1.49
VPS53-219ENST00000576019 EXD3Q8N9H8 876 aa5.73□□□□□ -1.49
VPS53-219ENST00000576019 LPCAT1Q8NF37 534 aa5.73□□□□□ -1.49
VPS53-219ENST00000576019 DBF4BQ8NFT6 615 aa5.73□□□□□ -1.49
VPS53-219ENST00000576019 FEZF2Q8TBJ5 459 aa5.73□□□□□ -1.49
VPS53-219ENST00000576019 SLC13A3Q8WWT9 602 aa5.73□□□□□ -1.49
VPS53-219ENST00000576019 FAM111AQ96PZ2 611 aa5.73□□□□□ -1.49
VPS53-219ENST00000576019 GAL3ST4Q96RP7 486 aa5.73□□□□□ -1.49
VPS53-219ENST00000576019 ADGRE3Q9BY15 652 aa5.73□□□□□ -1.49
VPS53-219ENST00000576019 FRMD8Q9BZ67 464 aaPredicted RBP5.73□□□□□ -1.49
VPS53-219ENST00000576019 SLCO5A1Q9H2Y9 848 aa5.73□□□□□ -1.49
VPS53-219ENST00000576019 TMEM206Q9H813 350 aa5.73□□□□□ -1.49
VPS53-219ENST00000576019 ANKZF1Q9H8Y5 726 aa5.73□□□□□ -1.49
VPS53-219ENST00000576019 ZBTB40Q9NUA8 1239 aa5.73□□□□□ -1.49
VPS53-219ENST00000576019 CYP39A1Q9NYL5 469 aa5.73□□□□□ -1.49
VPS53-219ENST00000576019 HEY2Q9UBP5 337 aa5.73□□□□□ -1.49
VPS53-219ENST00000576019 DDX25Q9UHL0 483 aaKnown RBP5.73□□□□□ -1.49
VPS53-219ENST00000576019 FBXL5Q9UKA1 691 aa5.73□□□□□ -1.49
VPS53-219ENST00000576019 CARD8Q9Y2G2 431 aa5.73□□□□□ -1.49
VPS53-219ENST00000576019 LSM4Q9Y4Z0 139 aaKnown RBP5.73□□□□□ -1.49
VPS53-219ENST00000576019 INSL6Q9Y581 213 aa5.73□□□□□ -1.49
VPS53-219ENST00000576019 IRAK3Q9Y616 596 aa5.73□□□□□ -1.49
VPS53-219ENST00000576019 RALGAPA1Q6GYQ0 2036 aa5.73□□□□□ -1.49
VPS53-219ENST00000576019 COL5A1P20908 1838 aaPredicted RBP5.73□□□□□ -1.49
VPS53-219ENST00000576019 TSC2P49815 1807 aa5.73□□□□□ -1.49
VPS53-219ENST00000576019 F8P00451 2351 aa5.72□□□□□ -1.49
VPS53-219ENST00000576019 A0A0B4J293 547 aa5.72□□□□□ -1.49
VPS53-219ENST00000576019 ZNF503-AS2A6NEH8 195 aa5.72□□□□□ -1.49
VPS53-219ENST00000576019 OOEPA6NGQ2 149 aa5.72□□□□□ -1.49
VPS53-219ENST00000576019 MROH6A6NGR9 719 aa5.72□□□□□ -1.49
VPS53-219ENST00000576019 DIRC3C9JPN6 131 aa5.72□□□□□ -1.49
VPS53-219ENST00000576019 IFIT3O14879 490 aaKnown RBP5.72□□□□□ -1.49
VPS53-219ENST00000576019 EIF3DO15371 548 aaKnown RBP eCLIP5.72□□□□□ -1.49
VPS53-219ENST00000576019 ST8SIA3O43173 380 aa5.72□□□□□ -1.49
VPS53-219ENST00000576019 NOL3O60936 208 aaKnown RBP5.72□□□□□ -1.49
VPS53-219ENST00000576019 ALPPP05187 535 aa5.72□□□□□ -1.49
VPS53-219ENST00000576019 DCNP07585 359 aaKnown RBP5.72□□□□□ -1.49
VPS53-219ENST00000576019 MMP2P08253 660 aa5.72□□□□□ -1.49
VPS53-219ENST00000576019 ALPPL2P10696 532 aa5.72□□□□□ -1.49
VPS53-219ENST00000576019 GHRP10912 638 aa5.72□□□□□ -1.49
VPS53-219ENST00000576019 KRT13P13646 458 aa5.72□□□□□ -1.49
VPS53-219ENST00000576019 ADRA2CP18825 462 aa5.72□□□□□ -1.49
VPS53-219ENST00000576019 DRD4P21917 467 aa5.72□□□□□ -1.49
VPS53-219ENST00000576019 TGM2P21980 687 aa5.72□□□□□ -1.49
VPS53-219ENST00000576019 ELAVL4P26378 380 aaKnown RBP5.72□□□□□ -1.49
VPS53-219ENST00000576019 ACADLP28330 430 aa5.72□□□□□ -1.49
VPS53-219ENST00000576019 ATXN3P54252 364 aaPredicted RBP5.72□□□□□ -1.49
VPS53-219ENST00000576019 ITIH3Q06033 890 aa5.72□□□□□ -1.49
VPS53-219ENST00000576019 ACSM1Q08AH1 577 aa5.72□□□□□ -1.49
VPS53-219ENST00000576019 FOXL1Q12952 345 aa5.72□□□□□ -1.49
VPS53-219ENST00000576019 RABEP1Q15276 862 aa5.72□□□□□ -1.49
VPS53-219ENST00000576019 RPS6KA1Q15418 735 aa5.72□□□□□ -1.49
VPS53-219ENST00000576019 DNTTIP2Q5QJE6 756 aaKnown RBP5.72□□□□□ -1.49
VPS53-219ENST00000576019 STPG1Q5TH74 334 aa5.72□□□□□ -1.49
VPS53-219ENST00000576019 DENND2CQ68D51 928 aa5.72□□□□□ -1.49
VPS53-219ENST00000576019 DPY19L2P1Q6NXN4 242 aa5.72□□□□□ -1.49
VPS53-219ENST00000576019 FBXO42Q6P3S6 717 aa5.72□□□□□ -1.49
VPS53-219ENST00000576019 MOXD1Q6UVY6 613 aa5.72□□□□□ -1.49
VPS53-219ENST00000576019 MEX3BQ6ZN04 569 aaKnown RBP5.72□□□□□ -1.49
VPS53-219ENST00000576019 Q6ZWC4 215 aa5.72□□□□□ -1.49
VPS53-219ENST00000576019 HAUS6Q7Z4H7 955 aa5.72□□□□□ -1.49
VPS53-219ENST00000576019 TBC1D26Q86UD7 250 aa5.72□□□□□ -1.49
VPS53-219ENST00000576019 NOXA1Q86UR1 476 aa5.72□□□□□ -1.49
VPS53-219ENST00000576019 HAPLN4Q86UW8 402 aa5.72□□□□□ -1.49
VPS53-219ENST00000576019 TAX1BP1Q86VP1 789 aa5.72□□□□□ -1.49
VPS53-219ENST00000576019 FBXO39Q8N4B4 442 aa5.72□□□□□ -1.49
VPS53-219ENST00000576019 ZCCHC9Q8N567 271 aaKnown RBP5.72□□□□□ -1.49
VPS53-219ENST00000576019 MRPL43Q8N983 215 aaKnown RBP5.72□□□□□ -1.49
VPS53-219ENST00000576019 UXS1Q8NBZ7 420 aa5.72□□□□□ -1.49
VPS53-219ENST00000576019 OR10S1Q8NGN2 331 aa5.72□□□□□ -1.49
VPS53-219ENST00000576019 PSMA8Q8TAA3 256 aa5.72□□□□□ -1.49
VPS53-219ENST00000576019 FBXO30Q8TB52 745 aa5.72□□□□□ -1.49
VPS53-219ENST00000576019 MOAP1Q96BY2 351 aa5.72□□□□□ -1.49
VPS53-219ENST00000576019 NXNL1Q96CM4 212 aa5.72□□□□□ -1.49
VPS53-219ENST00000576019 SIGLEC10Q96LC7 697 aa5.72□□□□□ -1.49
VPS53-219ENST00000576019 GDAP1L1Q96MZ0 367 aa5.72□□□□□ -1.49
VPS53-219ENST00000576019 CAMK1GQ96NX5 476 aa5.72□□□□□ -1.49
VPS53-219ENST00000576019 ZNF347Q96SE7 839 aa5.72□□□□□ -1.49
VPS53-219ENST00000576019 MNTQ99583 582 aa5.72□□□□□ -1.49
VPS53-219ENST00000576019 SH3GL2Q99962 352 aa5.72□□□□□ -1.49
VPS53-219ENST00000576019 THUMPD2Q9BTF0 503 aaKnown RBP5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms