RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 SIDT2Q8NBJ9 832 aaKnown RBP13.68□□□□□ -0.22
RPAIN-217ENST00000575711 UHMK1Q8TAS1 419 aaKnown RBP13.68□□□□□ -0.22
RPAIN-217ENST00000575711 UBLCP1Q8WVY7 318 aaPredicted RBP13.68□□□□□ -0.22
RPAIN-217ENST00000575711 CXorf40BQ96DE9 158 aa13.68□□□□□ -0.22
RPAIN-217ENST00000575711 MRRFQ96E11 262 aaKnown RBP13.68□□□□□ -0.22
RPAIN-217ENST00000575711 VPS39Q96JC1 886 aa13.68□□□□□ -0.22
RPAIN-217ENST00000575711 ELMO2Q96JJ3 720 aa13.68□□□□□ -0.22
RPAIN-217ENST00000575711 RMDN2Q96LZ7 410 aa13.68□□□□□ -0.22
RPAIN-217ENST00000575711 C12orf66Q96MD2 445 aa13.68□□□□□ -0.22
RPAIN-217ENST00000575711 GPR21Q99679 349 aa13.68□□□□□ -0.22
RPAIN-217ENST00000575711 RBBP8Q99708 897 aa13.68□□□□□ -0.22
RPAIN-217ENST00000575711 OR52A5Q9H2C5 316 aa13.68□□□□□ -0.22
RPAIN-217ENST00000575711 LATS2Q9NRM7 1088 aa13.68□□□□□ -0.22
RPAIN-217ENST00000575711 POT1Q9NUX5 634 aa13.68□□□□□ -0.22
RPAIN-217ENST00000575711 IMP3Q9NV31 184 aaKnown RBP13.68□□□□□ -0.22
RPAIN-217ENST00000575711 CPNE7Q9UBL6 633 aa13.68□□□□□ -0.22
RPAIN-217ENST00000575711 TRMT6Q9UJA5 497 aaKnown RBP13.68□□□□□ -0.22
RPAIN-217ENST00000575711 VWA7Q9Y334 891 aa13.68□□□□□ -0.22
RPAIN-217ENST00000575711 HEBP2Q9Y5Z4 205 aa13.68□□□□□ -0.22
RPAIN-217ENST00000575711 IKBKGQ9Y6K9 419 aa13.68□□□□□ -0.22
RPAIN-217ENST00000575711 U3KQA8 63 aa13.68□□□□□ -0.22
RPAIN-217ENST00000575711 COL5A1P20908 1838 aaPredicted RBP13.68□□□□□ -0.22
RPAIN-217ENST00000575711 CABIN1Q9Y6J0 2220 aa13.68□□□□□ -0.22
RPAIN-217ENST00000575711 PTPRZ1P23471 2315 aaPredicted RBP13.67□□□□□ -0.22
RPAIN-217ENST00000575711 RHPN2P1A8MT19 583 aa13.67□□□□□ -0.22
RPAIN-217ENST00000575711 NUDT21O43809 227 aaKnown RBP13.67□□□□□ -0.22
RPAIN-217ENST00000575711 SLCO2B1O94956 709 aa13.67□□□□□ -0.22
RPAIN-217ENST00000575711 INHBAP08476 426 aa13.67□□□□□ -0.22
RPAIN-217ENST00000575711 MTHFD1P11586 935 aaKnown RBP13.67□□□□□ -0.22
RPAIN-217ENST00000575711 CD9P21926 228 aa13.67□□□□□ -0.22
RPAIN-217ENST00000575711 SLC19A1P41440 591 aa13.67□□□□□ -0.22
RPAIN-217ENST00000575711 SKIV2L2P42285 1042 aaKnown RBP13.67□□□□□ -0.22
RPAIN-217ENST00000575711 LIMK2P53671 638 aa13.67□□□□□ -0.22
RPAIN-217ENST00000575711 CDKN2DP55273 166 aa13.67□□□□□ -0.22
RPAIN-217ENST00000575711 UBE2IP63279 158 aaKnown RBP13.67□□□□□ -0.22
RPAIN-217ENST00000575711 PDAP1Q13442 181 aaKnown RBP13.67□□□□□ -0.22
RPAIN-217ENST00000575711 NAA30Q147X3 362 aaPredicted RBP13.67□□□□□ -0.22
RPAIN-217ENST00000575711 UAP1Q16222 522 aaPredicted RBP13.67□□□□□ -0.22
RPAIN-217ENST00000575711 MAP9Q49MG5 647 aa13.67□□□□□ -0.22
RPAIN-217ENST00000575711 EFL1Q7Z2Z2 1120 aaKnown RBP13.67□□□□□ -0.22
RPAIN-217ENST00000575711 PDZD3Q86UT5 571 aa13.67□□□□□ -0.22
RPAIN-217ENST00000575711 SLC22A15Q8IZD6 547 aa13.67□□□□□ -0.22
RPAIN-217ENST00000575711 SPDYE1Q8NFV5 336 aaPredicted RBP13.67□□□□□ -0.22
RPAIN-217ENST00000575711 IFI44Q8TCB0 444 aa13.67□□□□□ -0.22
RPAIN-217ENST00000575711 AENQ8WTP8 325 aaKnown RBP13.67□□□□□ -0.22
RPAIN-217ENST00000575711 INPP5DQ92835 1189 aa13.67□□□□□ -0.22
RPAIN-217ENST00000575711 SH3KBP1Q96B97 665 aa13.67□□□□□ -0.22
RPAIN-217ENST00000575711 INSM2Q96T92 566 aaPredicted RBP13.67□□□□□ -0.22
RPAIN-217ENST00000575711 MCMBPQ9BTE3 642 aa13.67□□□□□ -0.22
RPAIN-217ENST00000575711 DLL3Q9NYJ7 618 aa13.67□□□□□ -0.22
RPAIN-217ENST00000575711 ZNF624Q9P2J8 865 aaPredicted RBP13.67□□□□□ -0.22
RPAIN-217ENST00000575711 LRIT1Q9P2V4 623 aa13.67□□□□□ -0.22
RPAIN-217ENST00000575711 GALPQ9UBC7 116 aa13.67□□□□□ -0.22
RPAIN-217ENST00000575711 CDYLQ9Y232 598 aa13.67□□□□□ -0.22
RPAIN-217ENST00000575711 MED16Q9Y2X0 877 aa13.67□□□□□ -0.22
RPAIN-217ENST00000575711 DHRS7Q9Y394 339 aa13.67□□□□□ -0.22
RPAIN-217ENST00000575711 CFAP20Q9Y6A4 193 aaKnown RBP13.67□□□□□ -0.22
RPAIN-217ENST00000575711 RNF215Q9Y6U7 377 aa13.67□□□□□ -0.22
RPAIN-217ENST00000575711 ASCC3Q8N3C0 2202 aaKnown RBP13.67□□□□□ -0.22
RPAIN-217ENST00000575711 EXOC1LA0A1B0GW35 172 aa13.66□□□□□ -0.22
RPAIN-217ENST00000575711 ZW10O43264 779 aa13.66□□□□□ -0.22
RPAIN-217ENST00000575711 FAM155BO75949 473 aa13.66□□□□□ -0.22
RPAIN-217ENST00000575711 PNLIPP16233 465 aa13.66□□□□□ -0.22
RPAIN-217ENST00000575711 SAT1P21673 171 aa13.66□□□□□ -0.22
RPAIN-217ENST00000575711 FDXRP22570 491 aa13.66□□□□□ -0.22
RPAIN-217ENST00000575711 ATP5DP30049 168 aa13.66□□□□□ -0.22
RPAIN-217ENST00000575711 ACADVLP49748 655 aa13.66□□□□□ -0.22
RPAIN-217ENST00000575711 SLC12A2P55011 1212 aa13.66□□□□□ -0.22
RPAIN-217ENST00000575711 POU4F1Q01851 419 aa13.66□□□□□ -0.22
RPAIN-217ENST00000575711 ILKQ13418 452 aa13.66□□□□□ -0.22
RPAIN-217ENST00000575711 KRT33BQ14525 404 aa13.66□□□□□ -0.22
RPAIN-217ENST00000575711 SLC29A2Q14542 456 aa13.66□□□□□ -0.22
RPAIN-217ENST00000575711 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.66□□□□□ -0.22
RPAIN-217ENST00000575711 VRK3Q8IV63 474 aa13.66□□□□□ -0.22
RPAIN-217ENST00000575711 RBM12BQ8IXT5 1001 aaKnown RBP13.66□□□□□ -0.22
RPAIN-217ENST00000575711 GIMAP7Q8NHV1 300 aa13.66□□□□□ -0.22
RPAIN-217ENST00000575711 CD200R1Q8TD46 325 aa13.66□□□□□ -0.22
RPAIN-217ENST00000575711 SKA2Q8WVK7 121 aaPredicted RBP13.66□□□□□ -0.22
RPAIN-217ENST00000575711 SLC44A1Q8WWI5 657 aa13.66□□□□□ -0.22
RPAIN-217ENST00000575711 TFGQ92734 400 aaPredicted RBP13.66□□□□□ -0.22
RPAIN-217ENST00000575711 CAVIN3Q969G5 261 aa13.66□□□□□ -0.22
RPAIN-217ENST00000575711 CCDC74AQ96AQ1 378 aa13.66□□□□□ -0.22
RPAIN-217ENST00000575711 SLC30A3Q99726 388 aa13.66□□□□□ -0.22
RPAIN-217ENST00000575711 OLFM1Q99784 485 aa13.66□□□□□ -0.22
RPAIN-217ENST00000575711 CCDC77Q9BR77 488 aa13.66□□□□□ -0.22
RPAIN-217ENST00000575711 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.66□□□□□ -0.22
RPAIN-217ENST00000575711 EPB41L4BQ9H329 900 aa13.66□□□□□ -0.22
RPAIN-217ENST00000575711 MTO1Q9Y2Z2 717 aaKnown RBP13.66□□□□□ -0.22
RPAIN-217ENST00000575711 PCDHGA1Q9Y5H4 931 aa13.66□□□□□ -0.22
RPAIN-217ENST00000575711 COLEC10Q9Y6Z7 277 aa13.66□□□□□ -0.22
RPAIN-217ENST00000575711 ZNF292O60281 2723 aa13.66□□□□□ -0.22
RPAIN-217ENST00000575711 SPAARA0A1B0GVQ0 90 aa13.65□□□□□ -0.22
RPAIN-217ENST00000575711 DCDC2BA2VCK2 349 aa13.65□□□□□ -0.22
RPAIN-217ENST00000575711 POC1B-GALNT4F8VUJ3 575 aa13.65□□□□□ -0.22
RPAIN-217ENST00000575711 PPM1DO15297 605 aa13.65□□□□□ -0.22
RPAIN-217ENST00000575711 RFPL3O75679 317 aa13.65□□□□□ -0.22
RPAIN-217ENST00000575711 KCNK5O95279 499 aa13.65□□□□□ -0.22
RPAIN-217ENST00000575711 GP1BAP07359 652 aa13.65□□□□□ -0.22
RPAIN-217ENST00000575711 ITGA2BP08514 1039 aa13.65□□□□□ -0.22
RPAIN-217ENST00000575711 CBSLP0DN79 551 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms