RNA–Protein interactions for RNA: ENST00000575112.5

RPAIN-215, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 3,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-215ENST00000575112 KIAA2013Q8IYS2 634 aa8.4□□□□□ -1.06
RPAIN-215ENST00000575112 ALDH16A1Q8IZ83 802 aa8.4□□□□□ -1.06
RPAIN-215ENST00000575112 DHRSXQ8N5I4 330 aa8.4□□□□□ -1.06
RPAIN-215ENST00000575112 CHPT1Q8WUD6 406 aa8.4□□□□□ -1.06
RPAIN-215ENST00000575112 MYOCQ99972 504 aa8.4□□□□□ -1.06
RPAIN-215ENST00000575112 ROGDIQ9GZN7 287 aa8.4□□□□□ -1.06
RPAIN-215ENST00000575112 RNF38Q9H0F5 515 aa8.4□□□□□ -1.06
RPAIN-215ENST00000575112 RUBCNLQ9H714 662 aa8.4□□□□□ -1.06
RPAIN-215ENST00000575112 NTN4Q9HB63 628 aa8.4□□□□□ -1.06
RPAIN-215ENST00000575112 SYTL2Q9HCH5 934 aa8.4□□□□□ -1.06
RPAIN-215ENST00000575112 GIN1Q9NXP7 522 aa8.4□□□□□ -1.06
RPAIN-215ENST00000575112 ERGIC3Q9Y282 383 aa8.4□□□□□ -1.06
RPAIN-215ENST00000575112 TLR6Q9Y2C9 796 aa8.4□□□□□ -1.06
RPAIN-215ENST00000575112 BRCA1P38398 1863 aaKnown RBP8.4□□□□□ -1.07
RPAIN-215ENST00000575112 SLCO1B7G3V0H7 640 aa8.4□□□□□ -1.07
RPAIN-215ENST00000575112 COCHO43405 550 aa8.4□□□□□ -1.07
RPAIN-215ENST00000575112 SMAD6O43541 496 aaKnown RBP8.4□□□□□ -1.07
RPAIN-215ENST00000575112 XPNPEP2O43895 674 aa8.4□□□□□ -1.07
RPAIN-215ENST00000575112 PRAMEF1O95521 474 aa8.4□□□□□ -1.07
RPAIN-215ENST00000575112 NDST3O95803 873 aa8.4□□□□□ -1.07
RPAIN-215ENST00000575112 PKMP14618 531 aaKnown RBP8.4□□□□□ -1.07
RPAIN-215ENST00000575112 TCEA1P23193 301 aaKnown RBP8.4□□□□□ -1.07
RPAIN-215ENST00000575112 FASP25445 335 aa8.4□□□□□ -1.07
RPAIN-215ENST00000575112 CSKP41240 450 aa8.4□□□□□ -1.07
RPAIN-215ENST00000575112 GSK3BP49841 420 aa8.4□□□□□ -1.07
RPAIN-215ENST00000575112 BCL2L1Q07817 233 aa8.4□□□□□ -1.07
RPAIN-215ENST00000575112 VAC14Q08AM6 782 aa8.4□□□□□ -1.07
RPAIN-215ENST00000575112 NAB1Q13506 487 aa8.4□□□□□ -1.07
RPAIN-215ENST00000575112 STARD3Q14849 445 aa8.4□□□□□ -1.07
RPAIN-215ENST00000575112 CTU2Q2VPK5 515 aaKnown RBP8.4□□□□□ -1.07
RPAIN-215ENST00000575112 PDCD4Q53EL6 469 aaKnown RBP8.4□□□□□ -1.07
RPAIN-215ENST00000575112 FAM45BPQ6NSW5 357 aa8.4□□□□□ -1.07
RPAIN-215ENST00000575112 SPESP1Q6UW49 350 aa8.4□□□□□ -1.07
RPAIN-215ENST00000575112 BEND7Q8N7W2 519 aaPredicted RBP8.4□□□□□ -1.07
RPAIN-215ENST00000575112 C2CD4AQ8NCU7 369 aaPredicted RBP8.4□□□□□ -1.07
RPAIN-215ENST00000575112 FAM45AQ8TCE6 357 aa8.4□□□□□ -1.07
RPAIN-215ENST00000575112 ELMO1Q92556 727 aa8.4□□□□□ -1.07
RPAIN-215ENST00000575112 ALPK1Q96QP1 1244 aa8.4□□□□□ -1.07
RPAIN-215ENST00000575112 DOK1Q99704 481 aa8.4□□□□□ -1.07
RPAIN-215ENST00000575112 ADGRE3Q9BY15 652 aa8.4□□□□□ -1.07
RPAIN-215ENST00000575112 IPPKQ9H8X2 491 aa8.4□□□□□ -1.07
RPAIN-215ENST00000575112 RIC8BQ9NVN3 520 aa8.4□□□□□ -1.07
RPAIN-215ENST00000575112 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.4□□□□□ -1.07
RPAIN-215ENST00000575112 GID8Q9NWU2 228 aa8.4□□□□□ -1.07
RPAIN-215ENST00000575112 CFAP97Q9P2B7 532 aa8.4□□□□□ -1.07
RPAIN-215ENST00000575112 IKZF3Q9UKT9 509 aa8.4□□□□□ -1.07
RPAIN-215ENST00000575112 SARDHQ9UL12 918 aa8.4□□□□□ -1.07
RPAIN-215ENST00000575112 PCDHB8Q9UN66 801 aa8.4□□□□□ -1.07
RPAIN-215ENST00000575112 FAM32AQ9Y421 112 aaKnown RBP8.4□□□□□ -1.07
RPAIN-215ENST00000575112 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.39□□□□□ -1.07
RPAIN-215ENST00000575112 ARVCFO00192 962 aa8.39□□□□□ -1.07
RPAIN-215ENST00000575112 HAS3O00219 553 aa8.39□□□□□ -1.07
RPAIN-215ENST00000575112 SAP18O00422 153 aaKnown RBP8.39□□□□□ -1.07
RPAIN-215ENST00000575112 NDUFB5O43674 189 aa8.39□□□□□ -1.07
RPAIN-215ENST00000575112 JRKO75564 520 aa8.39□□□□□ -1.07
RPAIN-215ENST00000575112 RPS9P46781 194 aaKnown RBP8.39□□□□□ -1.07
RPAIN-215ENST00000575112 LIPEQ05469 1076 aa8.39□□□□□ -1.07
RPAIN-215ENST00000575112 SQLEQ14534 574 aa8.39□□□□□ -1.07
RPAIN-215ENST00000575112 RGS21Q2M5E4 152 aa8.39□□□□□ -1.07
RPAIN-215ENST00000575112 CATSPEREQ5SY80 951 aa8.39□□□□□ -1.07
RPAIN-215ENST00000575112 MSANTD2Q6P1R3 559 aa8.39□□□□□ -1.07
RPAIN-215ENST00000575112 DOK6Q6PKX4 331 aa8.39□□□□□ -1.07
RPAIN-215ENST00000575112 GPRIN3Q6ZVF9 776 aa8.39□□□□□ -1.07
RPAIN-215ENST00000575112 CLIP4Q8N3C7 705 aa8.39□□□□□ -1.07
RPAIN-215ENST00000575112 OR13F1Q8NGS4 319 aa8.39□□□□□ -1.07
RPAIN-215ENST00000575112 OR10A6Q8NH74 314 aa8.39□□□□□ -1.07
RPAIN-215ENST00000575112 NDNFQ8TB73 568 aa8.39□□□□□ -1.07
RPAIN-215ENST00000575112 GANCQ8TET4 914 aa8.39□□□□□ -1.07
RPAIN-215ENST00000575112 TPD52L3Q96J77 140 aa8.39□□□□□ -1.07
RPAIN-215ENST00000575112 MAGED4Q96JG8 741 aa8.39□□□□□ -1.07
RPAIN-215ENST00000575112 FUNDC2Q9BWH2 189 aa8.39□□□□□ -1.07
RPAIN-215ENST00000575112 FARSBQ9NSD9 589 aaKnown RBP8.39□□□□□ -1.07
RPAIN-215ENST00000575112 ARMC1Q9NVT9 282 aa8.39□□□□□ -1.07
RPAIN-215ENST00000575112 SLCO3A1Q9UIG8 710 aa8.39□□□□□ -1.07
RPAIN-215ENST00000575112 ASB1Q9Y576 335 aa8.39□□□□□ -1.07
RPAIN-215ENST00000575112 PCDHGA8Q9Y5G5 932 aa8.39□□□□□ -1.07
RPAIN-215ENST00000575112 LINC00854A0A1B0GVQ3 168 aa8.39□□□□□ -1.07
RPAIN-215ENST00000575112 TMEM88BA6NKF7 163 aa8.39□□□□□ -1.07
RPAIN-215ENST00000575112 LSM1O15116 133 aaKnown RBP8.39□□□□□ -1.07
RPAIN-215ENST00000575112 CCL16O15467 120 aa8.39□□□□□ -1.07
RPAIN-215ENST00000575112 FFAR2O15552 330 aa8.39□□□□□ -1.07
RPAIN-215ENST00000575112 AQP9O43315 295 aa8.39□□□□□ -1.07
RPAIN-215ENST00000575112 BCAS1O75363 584 aaPredicted RBP8.39□□□□□ -1.07
RPAIN-215ENST00000575112 CAPN15O75808 1086 aa8.39□□□□□ -1.07
RPAIN-215ENST00000575112 MLYCDO95822 493 aa8.39□□□□□ -1.07
RPAIN-215ENST00000575112 BCL10O95999 233 aa8.39□□□□□ -1.07
RPAIN-215ENST00000575112 C1QCP02747 245 aa8.39□□□□□ -1.07
RPAIN-215ENST00000575112 WASP42768 502 aa8.39□□□□□ -1.07
RPAIN-215ENST00000575112 NR4A2P43354 598 aa8.39□□□□□ -1.07
RPAIN-215ENST00000575112 PSMD8P48556 350 aa8.39□□□□□ -1.07
RPAIN-215ENST00000575112 KCNJ8Q15842 424 aa8.39□□□□□ -1.07
RPAIN-215ENST00000575112 TRIM16LQ309B1 348 aa8.39□□□□□ -1.07
RPAIN-215ENST00000575112 LAIR2Q6ISS4 152 aa8.39□□□□□ -1.07
RPAIN-215ENST00000575112 ABRAXAS1Q6UWZ7 409 aa8.39□□□□□ -1.07
RPAIN-215ENST00000575112 ZNF621Q6ZSS3 439 aa8.39□□□□□ -1.07
RPAIN-215ENST00000575112 MFSD2AQ8NA29 543 aa8.39□□□□□ -1.07
RPAIN-215ENST00000575112 FOXJ1Q92949 421 aa8.39□□□□□ -1.07
RPAIN-215ENST00000575112 KCNN1Q92952 543 aa8.39□□□□□ -1.07
RPAIN-215ENST00000575112 NT5C3BQ969T7 300 aa8.39□□□□□ -1.07
RPAIN-215ENST00000575112 LRRC58Q96CX6 371 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms