RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 HLCSP50747 726 aa8.79□□□□□ -1
NCBP3-204ENST00000574911 ALDH3A2P51648 485 aa8.79□□□□□ -1
NCBP3-204ENST00000574911 NUP107P57740 925 aa8.79□□□□□ -1
NCBP3-204ENST00000574911 PLD1Q13393 1074 aa8.79□□□□□ -1
NCBP3-204ENST00000574911 DAG1Q14118 895 aa8.79□□□□□ -1
NCBP3-204ENST00000574911 CCNYL2Q5T2Q4 361 aa8.79□□□□□ -1
NCBP3-204ENST00000574911 RNF168Q8IYW5 571 aaPredicted RBP8.79□□□□□ -1
NCBP3-204ENST00000574911 DRAXINQ8NBI3 349 aaPredicted RBP8.79□□□□□ -1
NCBP3-204ENST00000574911 ITFG1Q8TB96 612 aa8.79□□□□□ -1
NCBP3-204ENST00000574911 FAM81AQ8TBF8 368 aa8.79□□□□□ -1
NCBP3-204ENST00000574911 C12orf43Q96C57 262 aaKnown RBP8.79□□□□□ -1
NCBP3-204ENST00000574911 TRMT2BQ96GJ1 504 aaKnown RBP8.79□□□□□ -1
NCBP3-204ENST00000574911 DOK1Q99704 481 aa8.79□□□□□ -1
NCBP3-204ENST00000574911 CLSTN3Q9BQT9 956 aa8.79□□□□□ -1
NCBP3-204ENST00000574911 HIPK3Q9H422 1215 aa8.79□□□□□ -1
NCBP3-204ENST00000574911 CARS2Q9HA77 564 aaKnown RBP8.79□□□□□ -1
NCBP3-204ENST00000574911 PKD2L2Q9NZM6 624 aa8.79□□□□□ -1
NCBP3-204ENST00000574911 VAPAQ9P0L0 249 aa8.79□□□□□ -1
NCBP3-204ENST00000574911 EIF3LQ9Y262 564 aaKnown RBP8.79□□□□□ -1
NCBP3-204ENST00000574911 ZFC3H1O60293 1989 aaKnown RBP8.78□□□□□ -1
NCBP3-204ENST00000574911 K7ERQ8 282 aa8.78□□□□□ -1
NCBP3-204ENST00000574911 GREM1O60565 184 aa8.78□□□□□ -1
NCBP3-204ENST00000574911 DEAF1O75398 565 aaPredicted RBP8.78□□□□□ -1
NCBP3-204ENST00000574911 ABLIM3O94929 683 aa8.78□□□□□ -1
NCBP3-204ENST00000574911 SLC25A14O95258 325 aaPredicted RBP8.78□□□□□ -1
NCBP3-204ENST00000574911 GUCA1CO95843 209 aa8.78□□□□□ -1
NCBP3-204ENST00000574911 DCKP27707 260 aa8.78□□□□□ -1
NCBP3-204ENST00000574911 TTKP33981 857 aa8.78□□□□□ -1
NCBP3-204ENST00000574911 ARSFP54793 590 aa8.78□□□□□ -1
NCBP3-204ENST00000574911 RPL38P63173 70 aaKnown RBP8.78□□□□□ -1
NCBP3-204ENST00000574911 NFATC2Q13469 925 aa8.78□□□□□ -1
NCBP3-204ENST00000574911 PLA2G4EQ3MJ16 856 aa8.78□□□□□ -1
NCBP3-204ENST00000574911 FAM98BQ52LJ0 330 aaKnown RBP8.78□□□□□ -1
NCBP3-204ENST00000574911 GPRC6AQ5T6X5 926 aa8.78□□□□□ -1
NCBP3-204ENST00000574911 LYPLAL1Q5VWZ2 237 aa8.78□□□□□ -1
NCBP3-204ENST00000574911 SULT1C3Q6IMI6 304 aa8.78□□□□□ -1
NCBP3-204ENST00000574911 TMEM214Q6NUQ4 689 aaKnown RBP8.78□□□□□ -1
NCBP3-204ENST00000574911 TRIM46Q7Z4K8 759 aa8.78□□□□□ -1
NCBP3-204ENST00000574911 HJURPQ8NCD3 748 aaPredicted RBP8.78□□□□□ -1
NCBP3-204ENST00000574911 ZNF420Q8TAQ5 688 aaPredicted RBP8.78□□□□□ -1
NCBP3-204ENST00000574911 WFDC5Q8TCV5 224 aa8.78□□□□□ -1
NCBP3-204ENST00000574911 SLC13A3Q8WWT9 602 aa8.78□□□□□ -1
NCBP3-204ENST00000574911 GTF2H4Q92759 462 aa8.78□□□□□ -1
NCBP3-204ENST00000574911 TMBIM1Q969X1 311 aa8.78□□□□□ -1
NCBP3-204ENST00000574911 ZBTB18Q99592 522 aa8.78□□□□□ -1
NCBP3-204ENST00000574911 C17orf80Q9BSJ5 609 aa8.78□□□□□ -1
NCBP3-204ENST00000574911 ASB8Q9H765 288 aa8.78□□□□□ -1
NCBP3-204ENST00000574911 CXorf21Q9HAI6 301 aa8.78□□□□□ -1
NCBP3-204ENST00000574911 ZFYVE1Q9HBF4 777 aa8.78□□□□□ -1
NCBP3-204ENST00000574911 ASIC5Q9NY37 505 aa8.78□□□□□ -1
NCBP3-204ENST00000574911 SRRDQ9UH36 339 aa8.78□□□□□ -1
NCBP3-204ENST00000574911 CIDEBQ9UHD4 219 aa8.78□□□□□ -1
NCBP3-204ENST00000574911 TRPS1Q9UHF7 1281 aa8.78□□□□□ -1
NCBP3-204ENST00000574911 CDC14AQ9UNH5 594 aa8.78□□□□□ -1
NCBP3-204ENST00000574911 HPRP00739 348 aa8.78□□□□□ -1
NCBP3-204ENST00000574911 TRBC1P01850 177 aa8.78□□□□□ -1
NCBP3-204ENST00000574911 ALBP02768 609 aa8.78□□□□□ -1
NCBP3-204ENST00000574911 ALPLP05186 524 aa8.78□□□□□ -1
NCBP3-204ENST00000574911 ACRV1P26436 265 aa8.78□□□□□ -1
NCBP3-204ENST00000574911 SP3Q02447 781 aa8.78□□□□□ -1
NCBP3-204ENST00000574911 MAD2L1Q13257 205 aaPredicted RBP8.78□□□□□ -1
NCBP3-204ENST00000574911 BFSP2Q13515 415 aa8.78□□□□□ -1
NCBP3-204ENST00000574911 RAB39AQ14964 217 aa8.78□□□□□ -1
NCBP3-204ENST00000574911 PLCL1Q15111 1095 aa8.78□□□□□ -1
NCBP3-204ENST00000574911 PHKG1Q16816 387 aa8.78□□□□□ -1
NCBP3-204ENST00000574911 METTL2BQ6P1Q9 378 aaKnown RBP8.78□□□□□ -1
NCBP3-204ENST00000574911 MACC1Q6ZN28 852 aa8.78□□□□□ -1
NCBP3-204ENST00000574911 KCTD8Q6ZWB6 473 aa8.78□□□□□ -1
NCBP3-204ENST00000574911 MSRB3Q8IXL7 192 aa8.78□□□□□ -1
NCBP3-204ENST00000574911 ZBTB2Q8N680 514 aa8.78□□□□□ -1
NCBP3-204ENST00000574911 DCAF4L2Q8NA75 395 aa8.78□□□□□ -1
NCBP3-204ENST00000574911 GLB1L3Q8NCI6 653 aaPredicted RBP8.78□□□□□ -1
NCBP3-204ENST00000574911 PNPT1Q8TCS8 783 aaKnown RBP8.78□□□□□ -1
NCBP3-204ENST00000574911 GFM2Q969S9 779 aaKnown RBP8.78□□□□□ -1
NCBP3-204ENST00000574911 RHBDF1Q96CC6 855 aa8.78□□□□□ -1
NCBP3-204ENST00000574911 NTMT1Q9BV86 223 aa8.78□□□□□ -1
NCBP3-204ENST00000574911 UGT2B28Q9BY64 529 aa8.78□□□□□ -1
NCBP3-204ENST00000574911 IL26Q9NPH9 171 aa8.78□□□□□ -1
NCBP3-204ENST00000574911 IFT80Q9P2H3 777 aaPredicted RBP8.78□□□□□ -1
NCBP3-204ENST00000574911 OPTCQ9UBM4 332 aa8.78□□□□□ -1
NCBP3-204ENST00000574911 YIPF1Q9Y548 306 aa8.78□□□□□ -1
NCBP3-204ENST00000574911 A0A0J9YVX5 310 aa8.77□□□□□ -1.01
NCBP3-204ENST00000574911 TRIM64BA6NI03 449 aa8.77□□□□□ -1.01
NCBP3-204ENST00000574911 K7EPI3 171 aa8.77□□□□□ -1.01
NCBP3-204ENST00000574911 TRIM16O95361 564 aa8.77□□□□□ -1.01
NCBP3-204ENST00000574911 MBL2P11226 248 aaPredicted RBP8.77□□□□□ -1.01
NCBP3-204ENST00000574911 BMP1P13497 986 aa8.77□□□□□ -1.01
NCBP3-204ENST00000574911 TCF3P15923 654 aa8.77□□□□□ -1.01
NCBP3-204ENST00000574911 ITGALP20701 1170 aa8.77□□□□□ -1.01
NCBP3-204ENST00000574911 NFKBIAP25963 317 aa8.77□□□□□ -1.01
NCBP3-204ENST00000574911 SHMT2P34897 504 aa8.77□□□□□ -1.01
NCBP3-204ENST00000574911 HNF1BP35680 557 aa8.77□□□□□ -1.01
NCBP3-204ENST00000574911 GDF5P43026 501 aa8.77□□□□□ -1.01
NCBP3-204ENST00000574911 PPP3CCP48454 512 aa8.77□□□□□ -1.01
NCBP3-204ENST00000574911 SMAD3P84022 425 aaKnown RBP8.77□□□□□ -1.01
NCBP3-204ENST00000574911 CHRNB3Q05901 458 aa8.77□□□□□ -1.01
NCBP3-204ENST00000574911 CBX2Q14781 532 aaPredicted RBP8.77□□□□□ -1.01
NCBP3-204ENST00000574911 PTGR1Q14914 329 aa8.77□□□□□ -1.01
NCBP3-204ENST00000574911 OTUD3Q5T2D3 398 aaPredicted RBP8.77□□□□□ -1.01
NCBP3-204ENST00000574911 FAM43BQ6ZT52 329 aaPredicted RBP8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms