RNA–Protein interactions for RNA: ENST00000572383.1

PFN1-202, Transcript of profilin 1, humanhuman

TSL 3

Gene PFN1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-202ENST00000572383 NTN3O00634 580 aaPredicted RBP17.71■□□□□ 0.43
PFN1-202ENST00000572383 EIF3HO15372 352 aaKnown RBP eCLIP17.71■□□□□ 0.43
PFN1-202ENST00000572383 MT-CO3P00414 261 aa17.71■□□□□ 0.43
PFN1-202ENST00000572383 CCR7P32248 378 aa17.71■□□□□ 0.43
PFN1-202ENST00000572383 GPR3P46089 330 aa17.71■□□□□ 0.43
PFN1-202ENST00000572383 MPP1Q00013 466 aa17.71■□□□□ 0.43
PFN1-202ENST00000572383 BOP1Q14137 746 aaKnown RBP17.71■□□□□ 0.43
PFN1-202ENST00000572383 RTP5Q14D33 572 aa17.71■□□□□ 0.43
PFN1-202ENST00000572383 AMZ1Q400G9 498 aa17.71■□□□□ 0.43
PFN1-202ENST00000572383 DNTTIP2Q5QJE6 756 aaKnown RBP17.71■□□□□ 0.43
PFN1-202ENST00000572383 CAPRIN2Q6IMN6 1127 aaKnown RBP17.71■□□□□ 0.43
PFN1-202ENST00000572383 LMNTD2Q8IXW0 634 aa17.71■□□□□ 0.43
PFN1-202ENST00000572383 LRRN4CLQ8ND94 238 aa17.71■□□□□ 0.43
PFN1-202ENST00000572383 CALML6Q8TD86 181 aa17.71■□□□□ 0.43
PFN1-202ENST00000572383 C12orf66Q96MD2 445 aa17.71■□□□□ 0.43
PFN1-202ENST00000572383 TSSK1BQ9BXA7 367 aa17.71■□□□□ 0.43
PFN1-202ENST00000572383 OR52A5Q9H2C5 316 aa17.71■□□□□ 0.43
PFN1-202ENST00000572383 SLC40A1Q9NP59 571 aa17.71■□□□□ 0.43
PFN1-202ENST00000572383 PPANQ9NQ55 473 aaKnown RBP17.71■□□□□ 0.43
PFN1-202ENST00000572383 ZDHHC18Q9NUE0 388 aa17.71■□□□□ 0.43
PFN1-202ENST00000572383 POT1Q9NUX5 634 aa17.71■□□□□ 0.43
PFN1-202ENST00000572383 IMP3Q9NV31 184 aaKnown RBP17.71■□□□□ 0.43
PFN1-202ENST00000572383 KCNK4Q9NYG8 393 aa17.71■□□□□ 0.43
PFN1-202ENST00000572383 FBXO5Q9UKT4 447 aa17.71■□□□□ 0.43
PFN1-202ENST00000572383 ATXN7L1Q9ULK2 861 aaPredicted RBP17.71■□□□□ 0.43
PFN1-202ENST00000572383 SLC5A10A0PJK1 596 aa17.7■□□□□ 0.42
PFN1-202ENST00000572383 ESPNB1AK53 854 aa17.7■□□□□ 0.42
PFN1-202ENST00000572383 LIN7AO14910 233 aaPredicted RBP17.7■□□□□ 0.42
PFN1-202ENST00000572383 MTHFD1P11586 935 aaKnown RBP17.7■□□□□ 0.42
PFN1-202ENST00000572383 CARSP49589 748 aaKnown RBP17.7■□□□□ 0.42
PFN1-202ENST00000572383 CSE1LP55060 971 aaKnown RBP17.7■□□□□ 0.42
PFN1-202ENST00000572383 ADARP55265 1226 aaKnown RBP17.7■□□□□ 0.42
PFN1-202ENST00000572383 RPA4Q13156 261 aa17.7■□□□□ 0.42
PFN1-202ENST00000572383 SPIDRQ14159 915 aa17.7■□□□□ 0.42
PFN1-202ENST00000572383 SYTL3Q4VX76 610 aa17.7■□□□□ 0.42
PFN1-202ENST00000572383 NKAIN2Q5VXU1 208 aa17.7■□□□□ 0.42
PFN1-202ENST00000572383 DUS1LQ6P1R4 473 aaKnown RBP17.7■□□□□ 0.42
PFN1-202ENST00000572383 CCDC25Q86WR0 208 aa17.7■□□□□ 0.42
PFN1-202ENST00000572383 AVL9Q8NBF6 648 aa17.7■□□□□ 0.42
PFN1-202ENST00000572383 C2CD4AQ8NCU7 369 aaPredicted RBP17.7■□□□□ 0.42
PFN1-202ENST00000572383 WDR48Q8TAF3 677 aa17.7■□□□□ 0.42
PFN1-202ENST00000572383 PYROXD1Q8WU10 500 aa17.7■□□□□ 0.42
PFN1-202ENST00000572383 SH3KBP1Q96B97 665 aa17.7■□□□□ 0.42
PFN1-202ENST00000572383 GFM1Q96RP9 751 aaKnown RBP17.7■□□□□ 0.42
PFN1-202ENST00000572383 TBC1D10AQ9BXI6 508 aa17.7■□□□□ 0.42
PFN1-202ENST00000572383 L2HGDHQ9H9P8 463 aa17.7■□□□□ 0.42
PFN1-202ENST00000572383 FAM114A2Q9NRY5 505 aa17.7■□□□□ 0.42
PFN1-202ENST00000572383 SLC17A6Q9P2U8 582 aa17.7■□□□□ 0.42
PFN1-202ENST00000572383 VPS9D1Q9Y2B5 631 aa17.7■□□□□ 0.42
PFN1-202ENST00000572383 RAXQ9Y2V3 346 aa17.7■□□□□ 0.42
PFN1-202ENST00000572383 PCDHB1Q9Y5F3 818 aa17.7■□□□□ 0.42
PFN1-202ENST00000572383 IGHV1OR21-1A0A087WYE8 117 aa17.69■□□□□ 0.42
PFN1-202ENST00000572383 NIPSNAP2O75323 286 aa17.69■□□□□ 0.42
PFN1-202ENST00000572383 HAUS5O94927 633 aa17.69■□□□□ 0.42
PFN1-202ENST00000572383 ESR1P03372 595 aa17.69■□□□□ 0.42
PFN1-202ENST00000572383 CD1CP29017 333 aa17.69■□□□□ 0.42
PFN1-202ENST00000572383 HSPA14Q0VDF9 509 aa17.69■□□□□ 0.42
PFN1-202ENST00000572383 GPR18Q14330 331 aa17.69■□□□□ 0.42
PFN1-202ENST00000572383 TEDDM1Q5T9Z0 273 aa17.69■□□□□ 0.42
PFN1-202ENST00000572383 ZNF549Q6P9A3 640 aa17.69■□□□□ 0.42
PFN1-202ENST00000572383 ZNF449Q6P9G9 518 aa17.69■□□□□ 0.42
PFN1-202ENST00000572383 CNSTQ6PJW8 725 aa17.69■□□□□ 0.42
PFN1-202ENST00000572383 RBM44Q6ZP01 1051 aaKnown RBP17.69■□□□□ 0.42
PFN1-202ENST00000572383 CAPN12Q6ZSI9 719 aa17.69■□□□□ 0.42
PFN1-202ENST00000572383 CNTN4Q8IWV2 1026 aa17.69■□□□□ 0.42
PFN1-202ENST00000572383 GSDMBQ8TAX9 411 aa17.69■□□□□ 0.42
PFN1-202ENST00000572383 FAM136AQ96C01 138 aa17.69■□□□□ 0.42
PFN1-202ENST00000572383 DEPDC7Q96QD5 511 aa17.69■□□□□ 0.42
PFN1-202ENST00000572383 PANX3Q96QZ0 392 aa17.69■□□□□ 0.42
PFN1-202ENST00000572383 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.69■□□□□ 0.42
PFN1-202ENST00000572383 RDH14Q9HBH5 336 aa17.69■□□□□ 0.42
PFN1-202ENST00000572383 AK5Q9Y6K8 562 aa17.69■□□□□ 0.42
PFN1-202ENST00000572383 D6RAR5 112 aa17.68■□□□□ 0.42
PFN1-202ENST00000572383 ZW10O43264 779 aa17.68■□□□□ 0.42
PFN1-202ENST00000572383 TCEA3O75764 348 aa17.68■□□□□ 0.42
PFN1-202ENST00000572383 PKMP14618 531 aaKnown RBP17.68■□□□□ 0.42
PFN1-202ENST00000572383 AOAHP28039 575 aa17.68■□□□□ 0.42
PFN1-202ENST00000572383 SSTR1P30872 391 aa17.68■□□□□ 0.42
PFN1-202ENST00000572383 MAPK9P45984 424 aa17.68■□□□□ 0.42
PFN1-202ENST00000572383 LEPRP48357 1165 aaKnown RBP17.68■□□□□ 0.42
PFN1-202ENST00000572383 FRG1Q14331 258 aaKnown RBP17.68■□□□□ 0.42
PFN1-202ENST00000572383 TMEM26Q6ZUK4 368 aa17.68■□□□□ 0.42
PFN1-202ENST00000572383 USP53Q70EK8 1073 aa17.68■□□□□ 0.42
PFN1-202ENST00000572383 TMPRSS9Q7Z410 1059 aa17.68■□□□□ 0.42
PFN1-202ENST00000572383 VRK3Q8IV63 474 aa17.68■□□□□ 0.42
PFN1-202ENST00000572383 PALM2Q8IXS6 379 aa17.68■□□□□ 0.42
PFN1-202ENST00000572383 JPH3Q8WXH2 748 aaPredicted RBP17.68■□□□□ 0.42
PFN1-202ENST00000572383 IFT81Q8WYA0 676 aa17.68■□□□□ 0.42
PFN1-202ENST00000572383 TMEM159Q96B96 161 aa17.68■□□□□ 0.42
PFN1-202ENST00000572383 C9orf72Q96LT7 481 aa17.68■□□□□ 0.42
PFN1-202ENST00000572383 PHACTR1Q9C0D0 580 aa17.68■□□□□ 0.42
PFN1-202ENST00000572383 UCK1Q9HA47 277 aa17.68■□□□□ 0.42
PFN1-202ENST00000572383 GALPQ9UBC7 116 aa17.68■□□□□ 0.42
PFN1-202ENST00000572383 CDYLQ9Y232 598 aa17.68■□□□□ 0.42
PFN1-202ENST00000572383 LOC400499M0QZD8 3231 aa17.68■□□□□ 0.42
PFN1-202ENST00000572383 PIKFYVEQ9Y2I7 2098 aa17.67■□□□□ 0.42
PFN1-202ENST00000572383 LILRA5A6NI73 299 aa17.67■□□□□ 0.42
PFN1-202ENST00000572383 H3BMM5 538 aa17.67■□□□□ 0.42
PFN1-202ENST00000572383 IFRD1O00458 451 aaPredicted RBP17.67■□□□□ 0.42
PFN1-202ENST00000572383 CSO75390 466 aaKnown RBP17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms