RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 GPR1P46091 355 aa6.71□□□□□ -1.34
CHD3-213ENST00000571249 DCAF7P61962 342 aa6.71□□□□□ -1.34
CHD3-213ENST00000571249 ENPEPQ07075 957 aa6.71□□□□□ -1.34
CHD3-213ENST00000571249 ABRQ12979 859 aa6.71□□□□□ -1.34
CHD3-213ENST00000571249 STK4Q13043 487 aa6.71□□□□□ -1.34
CHD3-213ENST00000571249 STIM1Q13586 685 aa6.71□□□□□ -1.34
CHD3-213ENST00000571249 GRM3Q14832 879 aa6.71□□□□□ -1.34
CHD3-213ENST00000571249 CYTH1Q15438 398 aa6.71□□□□□ -1.34
CHD3-213ENST00000571249 INAQ16352 499 aa6.71□□□□□ -1.34
CHD3-213ENST00000571249 INO80DQ53TQ3 878 aaPredicted RBP6.71□□□□□ -1.34
CHD3-213ENST00000571249 ZFYVE27Q5T4F4 411 aa6.71□□□□□ -1.34
CHD3-213ENST00000571249 MLIPQ5VWP3 458 aa6.71□□□□□ -1.34
CHD3-213ENST00000571249 TTI2Q6NXR4 508 aa6.71□□□□□ -1.34
CHD3-213ENST00000571249 HSD11B1LQ7Z5J1 315 aa6.71□□□□□ -1.34
CHD3-213ENST00000571249 C11orf96Q7Z7L8 435 aa6.71□□□□□ -1.34
CHD3-213ENST00000571249 CXorf67Q86X51 503 aaPredicted RBP6.71□□□□□ -1.34
CHD3-213ENST00000571249 TRIM48Q8IWZ4 208 aa6.71□□□□□ -1.34
CHD3-213ENST00000571249 D2HGDHQ8N465 521 aa6.71□□□□□ -1.34
CHD3-213ENST00000571249 MARVELD2Q8N4S9 558 aa6.71□□□□□ -1.34
CHD3-213ENST00000571249 CPSF7Q8N684 471 aaKnown RBP6.71□□□□□ -1.34
CHD3-213ENST00000571249 KIAA0895Q8NCT3 520 aa6.71□□□□□ -1.34
CHD3-213ENST00000571249 OR8K5Q8NH50 307 aa6.71□□□□□ -1.34
CHD3-213ENST00000571249 LILRB4Q8NHJ6 448 aa6.71□□□□□ -1.34
CHD3-213ENST00000571249 PHF10Q8WUB8 498 aaKnown RBP6.71□□□□□ -1.34
CHD3-213ENST00000571249 NELFBQ8WX92 580 aa6.71□□□□□ -1.34
CHD3-213ENST00000571249 CASKIN2Q8WXE0 1202 aa6.71□□□□□ -1.34
CHD3-213ENST00000571249 SHC3Q92529 594 aa6.71□□□□□ -1.34
CHD3-213ENST00000571249 DTD2Q96FN9 168 aa6.71□□□□□ -1.34
CHD3-213ENST00000571249 MAGED4Q96JG8 741 aa6.71□□□□□ -1.34
CHD3-213ENST00000571249 MAP3K3Q99759 626 aa6.71□□□□□ -1.34
CHD3-213ENST00000571249 BDH2Q9BUT1 245 aa6.71□□□□□ -1.34
CHD3-213ENST00000571249 KLC2Q9H0B6 622 aa6.71□□□□□ -1.34
CHD3-213ENST00000571249 MAGEH1Q9H213 219 aa6.71□□□□□ -1.34
CHD3-213ENST00000571249 KCNJ16Q9NPI9 418 aa6.71□□□□□ -1.34
CHD3-213ENST00000571249 ASNSD1Q9NWL6 643 aa6.71□□□□□ -1.34
CHD3-213ENST00000571249 COQ3Q9NZJ6 369 aa6.71□□□□□ -1.34
CHD3-213ENST00000571249 PPARGC1AQ9UBK2 798 aaKnown RBP6.71□□□□□ -1.34
CHD3-213ENST00000571249 B4GALT6Q9UBX8 382 aa6.71□□□□□ -1.34
CHD3-213ENST00000571249 EPHA6Q9UF33 1036 aa6.71□□□□□ -1.34
CHD3-213ENST00000571249 MCM8Q9UJA3 840 aa6.71□□□□□ -1.34
CHD3-213ENST00000571249 PTRH2Q9Y3E5 179 aaKnown RBP6.71□□□□□ -1.34
CHD3-213ENST00000571249 COMMD10Q9Y6G5 202 aa6.71□□□□□ -1.34
CHD3-213ENST00000571249 MPDZO75970 2070 aa6.71□□□□□ -1.34
CHD3-213ENST00000571249 DYSFO75923 2080 aa6.7□□□□□ -1.34
CHD3-213ENST00000571249 TMEM238LA0A1B0GVL6 79 aa6.7□□□□□ -1.34
CHD3-213ENST00000571249 BICDL2A1A5D9 508 aa6.7□□□□□ -1.34
CHD3-213ENST00000571249 E9PLN8 166 aa6.7□□□□□ -1.34
CHD3-213ENST00000571249 ARHGEF9O43307 516 aa6.7□□□□□ -1.34
CHD3-213ENST00000571249 KLK8O60259 260 aa6.7□□□□□ -1.34
CHD3-213ENST00000571249 STX10O60499 249 aa6.7□□□□□ -1.34
CHD3-213ENST00000571249 RAMP2O60895 175 aa6.7□□□□□ -1.34
CHD3-213ENST00000571249 DAB1O75553 588 aa6.7□□□□□ -1.34
CHD3-213ENST00000571249 SOD1P00441 154 aa6.7□□□□□ -1.34
CHD3-213ENST00000571249 SKILP12757 684 aa6.7□□□□□ -1.34
CHD3-213ENST00000571249 XRCC1P18887 633 aaPredicted RBP6.7□□□□□ -1.34
CHD3-213ENST00000571249 TBXAS1P24557 533 aaPredicted RBP6.7□□□□□ -1.34
CHD3-213ENST00000571249 EEF1GP26641 437 aaKnown RBP6.7□□□□□ -1.34
CHD3-213ENST00000571249 SERPINA4P29622 427 aa6.7□□□□□ -1.34
CHD3-213ENST00000571249 SULT1E1P49888 294 aa6.7□□□□□ -1.34
CHD3-213ENST00000571249 CDKN1CP49918 316 aaPredicted RBP6.7□□□□□ -1.34
CHD3-213ENST00000571249 EPHB1P54762 984 aa6.7□□□□□ -1.34
CHD3-213ENST00000571249 POLR2LP62875 67 aaKnown RBP6.7□□□□□ -1.34
CHD3-213ENST00000571249 ARG2P78540 354 aa6.7□□□□□ -1.34
CHD3-213ENST00000571249 HSD11B2P80365 405 aa6.7□□□□□ -1.34
CHD3-213ENST00000571249 HSF1Q00613 529 aa6.7□□□□□ -1.34
CHD3-213ENST00000571249 DEUP1Q05D60 604 aa6.7□□□□□ -1.34
CHD3-213ENST00000571249 PLCL1Q15111 1095 aa6.7□□□□□ -1.34
CHD3-213ENST00000571249 CNGA3Q16281 694 aa6.7□□□□□ -1.34
CHD3-213ENST00000571249 CBWD6Q4V339 395 aa6.7□□□□□ -1.34
CHD3-213ENST00000571249 CBWD3Q5JTY5 395 aa6.7□□□□□ -1.34
CHD3-213ENST00000571249 CBWD5Q5RIA9 395 aa6.7□□□□□ -1.34
CHD3-213ENST00000571249 ACBD5Q5T8D3 534 aaPredicted RBP6.7□□□□□ -1.34
CHD3-213ENST00000571249 PRAMEF13Q5VWM6 474 aa6.7□□□□□ -1.34
CHD3-213ENST00000571249 RWDD4Q6NW29 188 aaKnown RBP6.7□□□□□ -1.34
CHD3-213ENST00000571249 ISLR2Q6UXK2 745 aa6.7□□□□□ -1.34
CHD3-213ENST00000571249 ADAMTSL4Q6UY14 1074 aa6.7□□□□□ -1.34
CHD3-213ENST00000571249 Q6ZVL8 140 aa6.7□□□□□ -1.34
CHD3-213ENST00000571249 KMT5CQ86Y97 462 aa6.7□□□□□ -1.34
CHD3-213ENST00000571249 HIPK1Q86Z02 1210 aa6.7□□□□□ -1.34
CHD3-213ENST00000571249 CCDC71Q8IV32 467 aaPredicted RBP6.7□□□□□ -1.34
CHD3-213ENST00000571249 P3H2Q8IVL5 708 aa6.7□□□□□ -1.34
CHD3-213ENST00000571249 SMYD4Q8IYR2 804 aaPredicted RBP6.7□□□□□ -1.34
CHD3-213ENST00000571249 NSMCE3Q96MG7 304 aa6.7□□□□□ -1.34
CHD3-213ENST00000571249 TUBGCP5Q96RT8 1024 aa6.7□□□□□ -1.34
CHD3-213ENST00000571249 NPY6RQ99463 290 aa6.7□□□□□ -1.34
CHD3-213ENST00000571249 VKORC1Q9BQB6 163 aa6.7□□□□□ -1.34
CHD3-213ENST00000571249 DHRS4Q9BTZ2 278 aa6.7□□□□□ -1.34
CHD3-213ENST00000571249 RAB33BQ9H082 229 aa6.7□□□□□ -1.34
CHD3-213ENST00000571249 ACTR5Q9H9F9 607 aaPredicted RBP6.7□□□□□ -1.34
CHD3-213ENST00000571249 SLC6A20Q9NP91 592 aa6.7□□□□□ -1.34
CHD3-213ENST00000571249 DMRT3Q9NQL9 472 aa6.7□□□□□ -1.34
CHD3-213ENST00000571249 EXOC1Q9NV70 894 aa6.7□□□□□ -1.34
CHD3-213ENST00000571249 KCTD5Q9NXV2 234 aa6.7□□□□□ -1.34
CHD3-213ENST00000571249 ZDHHC3Q9NYG2 299 aa6.7□□□□□ -1.34
CHD3-213ENST00000571249 ZNF624Q9P2J8 865 aaPredicted RBP6.7□□□□□ -1.34
CHD3-213ENST00000571249 FBXL4Q9UKA2 621 aa6.7□□□□□ -1.34
CHD3-213ENST00000571249 CTNND2Q9UQB3 1225 aa6.7□□□□□ -1.34
CHD3-213ENST00000571249 TRAF3IP3Q9Y228 551 aa6.7□□□□□ -1.34
CHD3-213ENST00000571249 RNF6Q9Y252 685 aa6.7□□□□□ -1.34
CHD3-213ENST00000571249 SIK3Q9Y2K2 1263 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms