RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 PRMT7Q9NVM4 692 aaPredicted RBP3.52□□□□□ -1.85
SMG6-208ENST00000570874 CPNE7Q9UBL6 633 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 TJP2Q9UDY2 1190 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 ANAPC2Q9UJX6 822 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 GGA2Q9UJY4 613 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 TSPAN16Q9UKR8 245 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 DNPEPQ9ULA0 475 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 PPIEQ9UNP9 301 aaKnown RBP3.52□□□□□ -1.85
SMG6-208ENST00000570874 KCNK7Q9Y2U2 307 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 MTO1Q9Y2Z2 717 aaKnown RBP3.52□□□□□ -1.85
SMG6-208ENST00000570874 EMC9Q9Y3B6 208 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 STRAPQ9Y3F4 350 aaKnown RBP3.52□□□□□ -1.85
SMG6-208ENST00000570874 HBS1LQ9Y450 684 aaKnown RBP3.52□□□□□ -1.85
SMG6-208ENST00000570874 HS3ST4Q9Y661 456 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 CDY2AQ9Y6F7 541 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 NOTCH4Q99466 2003 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 COL4A6Q14031 1691 aa3.52□□□□□ -1.85
SMG6-208ENST00000570874 ANKRD12Q6UB98 2062 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 MROH7Q68CQ1 1323 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 NRCAMQ92823 1304 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 DNAH12Q6ZR08 3092 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 C2orf16Q68DN1 1984 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 A0A087WUV0 522 aaPredicted RBP3.51□□□□□ -1.85
SMG6-208ENST00000570874 A0A0A6YYJ9 748 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 A0A0U1RQS6 177 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 LOC105371267A0A1B0GV96 52 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 SMIM35A0A1B0GVV1 85 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 TMEM120BA0PK00 339 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 C17orf102A2RUQ5 167 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 SMIM30A4D0T7 59 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 OOEPA6NGQ2 149 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 LIPT2A6NK58 231 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 GOLGA8KD6RF30 607 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 F8WDY8 70 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 SLCO1B7G3V0H7 640 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 PLK4O00444 970 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 PIK3R2O00459 728 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 PRRG1O14668 218 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 ZNF197O14709 1029 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 KIAA0391O15091 583 aaKnown RBP3.51□□□□□ -1.85
SMG6-208ENST00000570874 POLR1CO15160 346 aaPredicted RBP3.51□□□□□ -1.85
SMG6-208ENST00000570874 GSTA4O15217 222 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 DNAJA2O60884 412 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 DNAJB6O75190 326 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 DUSP11O75319 330 aaKnown RBP3.51□□□□□ -1.85
SMG6-208ENST00000570874 RPP40O75818 363 aaKnown RBP3.51□□□□□ -1.85
SMG6-208ENST00000570874 VNN2O95498 520 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 NDST3O95803 873 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 DDAH2O95865 285 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 TGM6O95932 706 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 CH25HO95992 272 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 ASS1P00966 412 aaKnown RBP3.51□□□□□ -1.85
SMG6-208ENST00000570874 TNNC2P02585 160 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 CRYGCP07315 174 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 YES1P07947 543 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 ABHD2P08910 425 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 ACAA1P09110 424 aaPredicted RBP3.51□□□□□ -1.85
SMG6-208ENST00000570874 TMEM253P0C7T8 217 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 MCF2P10911 925 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 ITGA4P13612 1032 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 DARSP14868 501 aaKnown RBP3.51□□□□□ -1.85
SMG6-208ENST00000570874 NPPBP16860 134 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 HOXB8P17481 243 aaPredicted RBP3.51□□□□□ -1.85
SMG6-208ENST00000570874 CDH2P19022 906 aaPredicted RBP3.51□□□□□ -1.85
SMG6-208ENST00000570874 CYP3A5P20815 502 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 CD40P25942 277 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 ITGB8P26012 769 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 PTPN6P29350 595 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 AVPR2P30518 371 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 ALDH3A1P30838 453 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 SOAT1P35610 550 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 PTGIRP43119 386 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 GABRB2P47870 512 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 SUCLG1P53597 346 aaKnown RBP3.51□□□□□ -1.85
SMG6-208ENST00000570874 RABGGTBP53611 331 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 PRMT2P55345 433 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 YWHAEP62258 255 aaKnown RBP3.51□□□□□ -1.85
SMG6-208ENST00000570874 NOMO3P69849 1222 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 CDR2Q01850 454 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 SP3Q02447 781 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 GCNT1Q02742 428 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 ENPEPQ07075 957 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 MGAT5Q09328 741 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 PTP4A2Q12974 167 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 DUSP4Q13115 394 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 SRSF5Q13243 272 aaKnown RBP3.51□□□□□ -1.85
SMG6-208ENST00000570874 CLN3Q13286 438 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 CAMK1Q14012 370 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 IRF3Q14653 427 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 PCLAFQ15004 111 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 LARS2Q15031 903 aaKnown RBP3.51□□□□□ -1.85
SMG6-208ENST00000570874 PON2Q15165 354 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 SF1Q15637 639 aaKnown RBP3.51□□□□□ -1.85
SMG6-208ENST00000570874 UGT8Q16880 541 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 CPEB4Q17RY0 729 aaKnown RBP eCLIP3.51□□□□□ -1.85
SMG6-208ENST00000570874 ZNF800Q2TB10 664 aaPredicted RBP eCLIP3.51□□□□□ -1.85
SMG6-208ENST00000570874 PRICKLE4Q2TBC4 344 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 ZNF699Q32M78 642 aa3.51□□□□□ -1.85
SMG6-208ENST00000570874 ZNF829Q3KNS6 432 aaPredicted RBP3.51□□□□□ -1.85
SMG6-208ENST00000570874 PCGF3Q3KNV8 242 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms