RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 SIM2Q14190 667 aaPredicted RBP15.1■□□□□ 0.01
HERPUD1-219ENST00000570273 TCEA2Q15560 299 aa15.1■□□□□ 0.01
HERPUD1-219ENST00000570273 PRR23BQ6ZRT6 265 aa15.1■□□□□ 0.01
HERPUD1-219ENST00000570273 NEK10Q6ZWH5 1172 aa15.1■□□□□ 0.01
HERPUD1-219ENST00000570273 ADAMTSL2Q86TH1 951 aa15.1■□□□□ 0.01
HERPUD1-219ENST00000570273 PHACTR4Q8IZ21 702 aa15.1■□□□□ 0.01
HERPUD1-219ENST00000570273 SLC22A15Q8IZD6 547 aa15.1■□□□□ 0.01
HERPUD1-219ENST00000570273 DENND1AQ8TEH3 1009 aa15.1■□□□□ 0.01
HERPUD1-219ENST00000570273 EXT2Q93063 718 aa15.1■□□□□ 0.01
HERPUD1-219ENST00000570273 KIAA1191Q96A73 305 aa15.1■□□□□ 0.01
HERPUD1-219ENST00000570273 INTS9Q9NV88 658 aaKnown RBP15.1■□□□□ 0.01
HERPUD1-219ENST00000570273 OGFRQ9NZT2 677 aa15.1■□□□□ 0.01
HERPUD1-219ENST00000570273 CPSF2Q9P2I0 782 aaKnown RBP15.1■□□□□ 0.01
HERPUD1-219ENST00000570273 SUSD2Q9UGT4 822 aa15.1■□□□□ 0.01
HERPUD1-219ENST00000570273 RNF112Q9ULX5 631 aa15.1■□□□□ 0.01
HERPUD1-219ENST00000570273 DGKBQ9Y6T7 804 aa15.1■□□□□ 0.01
HERPUD1-219ENST00000570273 PIKFYVEQ9Y2I7 2098 aa15.1■□□□□ 0.01
HERPUD1-219ENST00000570273 ABCA7Q8IZY2 2146 aa15.1■□□□□ 0.01
HERPUD1-219ENST00000570273 A0A1B0GTW7 788 aa15.09■□□□□ 0.01
HERPUD1-219ENST00000570273 PRR5-ARHGAP8B1AHC4 643 aa15.09■□□□□ 0.01
HERPUD1-219ENST00000570273 VILLO15195 856 aa15.09■□□□□ 0.01
HERPUD1-219ENST00000570273 KERAO60938 352 aa15.09■□□□□ 0.01
HERPUD1-219ENST00000570273 PDHA2P29803 388 aa15.09■□□□□ 0.01
HERPUD1-219ENST00000570273 ETV4P43268 484 aa15.09■□□□□ 0.01
HERPUD1-219ENST00000570273 CSNK1EP49674 416 aaKnown RBP15.09■□□□□ 0.01
HERPUD1-219ENST00000570273 HK3P52790 923 aa15.09■□□□□ 0.01
HERPUD1-219ENST00000570273 LRP8Q14114 963 aa15.09■□□□□ 0.01
HERPUD1-219ENST00000570273 OR4D1Q15615 310 aa15.09■□□□□ 0.01
HERPUD1-219ENST00000570273 ZNF542PQ5EBM4 170 aa15.09■□□□□ 0.01
HERPUD1-219ENST00000570273 XKR5Q6UX68 686 aa15.09■□□□□ 0.01
HERPUD1-219ENST00000570273 FRA10AC1Q70Z53 315 aa15.09■□□□□ 0.01
HERPUD1-219ENST00000570273 TAX1BP1Q86VP1 789 aa15.09■□□□□ 0.01
HERPUD1-219ENST00000570273 SPATS2Q86XZ4 545 aaKnown RBP15.09■□□□□ 0.01
HERPUD1-219ENST00000570273 DYDC1Q8WWB3 177 aa15.09■□□□□ 0.01
HERPUD1-219ENST00000570273 PIGKQ92643 395 aa15.09■□□□□ 0.01
HERPUD1-219ENST00000570273 ZC3H10Q96K80 434 aaKnown RBP15.09■□□□□ 0.01
HERPUD1-219ENST00000570273 TMEM168Q9H0V1 697 aa15.09■□□□□ 0.01
HERPUD1-219ENST00000570273 DNAJC28Q9NX36 388 aa15.09■□□□□ 0.01
HERPUD1-219ENST00000570273 VPS13AQ96RL7 3174 aa15.09■□□□□ 0.01
HERPUD1-219ENST00000570273 MUC6Q6W4X9 2439 aa15.09■□□□□ 0.01
HERPUD1-219ENST00000570273 A0A1B0GVT2 93 aa15.09■□□□□ 0.01
HERPUD1-219ENST00000570273 CCDC189A1A4V9 331 aa15.09■□□□□ 0.01
HERPUD1-219ENST00000570273 C8GP07360 202 aa15.09■□□□□ 0.01
HERPUD1-219ENST00000570273 SLC35G4P0C7Q5 338 aa15.09■□□□□ 0.01
HERPUD1-219ENST00000570273 MYL2P10916 166 aa15.09■□□□□ 0.01
HERPUD1-219ENST00000570273 IDSP22304 550 aa15.09■□□□□ 0.01
HERPUD1-219ENST00000570273 SERPINB4P48594 390 aa15.09■□□□□ 0.01
HERPUD1-219ENST00000570273 BLKP51451 505 aa15.09■□□□□ 0.01
HERPUD1-219ENST00000570273 WDR4P57081 412 aaKnown RBP15.09■□□□□ 0.01
HERPUD1-219ENST00000570273 CTBSQ01459 385 aa15.09■□□□□ 0.01
HERPUD1-219ENST00000570273 ILF3Q12906 894 aaKnown RBP eCLIP15.09■□□□□ 0.012e-6■□□□□ 9.1
HERPUD1-219ENST00000570273 ABRQ12979 859 aa15.09■□□□□ 0.01
HERPUD1-219ENST00000570273 SP140Q13342 867 aa15.09■□□□□ 0.01
HERPUD1-219ENST00000570273 CYHR1Q6ZMK1 362 aa15.09■□□□□ 0.01
HERPUD1-219ENST00000570273 ISCA2Q86U28 154 aa15.09■□□□□ 0.01
HERPUD1-219ENST00000570273 PDZD3Q86UT5 571 aa15.09■□□□□ 0.01
HERPUD1-219ENST00000570273 CFAP61Q8NHU2 1237 aa15.09■□□□□ 0.01
HERPUD1-219ENST00000570273 RHEBL1Q8TAI7 183 aa15.09■□□□□ 0.01
HERPUD1-219ENST00000570273 STAG3L4Q8TBR4 150 aa15.09■□□□□ 0.01
HERPUD1-219ENST00000570273 RDH11Q8TC12 318 aa15.09■□□□□ 0.01
HERPUD1-219ENST00000570273 FOPNLQ96NB1 174 aa15.09■□□□□ 0.01
HERPUD1-219ENST00000570273 WWP1Q9H0M0 922 aa15.09■□□□□ 0.01
HERPUD1-219ENST00000570273 KCNH6Q9H252 994 aa15.09■□□□□ 0.01
HERPUD1-219ENST00000570273 OR52A5Q9H2C5 316 aa15.09■□□□□ 0.01
HERPUD1-219ENST00000570273 TCEAL2Q9H3H9 227 aaPredicted RBP15.09■□□□□ 0.01
HERPUD1-219ENST00000570273 DPEP2Q9H4A9 486 aa15.09■□□□□ 0.01
HERPUD1-219ENST00000570273 TRNAU1APQ9NX07 287 aaKnown RBP15.09■□□□□ 0.01
HERPUD1-219ENST00000570273 APOBEC3BQ9UH17 382 aaKnown RBP15.09■□□□□ 0.01
HERPUD1-219ENST00000570273 ACSL5Q9ULC5 683 aa15.09■□□□□ 0.01
HERPUD1-219ENST00000570273 THADAQ6YHU6 1953 aa15.08■□□□□ 0
HERPUD1-219ENST00000570273 PABPN1LA6NDY0 278 aaKnown RBP15.08■□□□□ 0
HERPUD1-219ENST00000570273 SYCE1LA8MT33 242 aa15.08■□□□□ 0
HERPUD1-219ENST00000570273 PDZK1P1A8MUH7 402 aa15.08■□□□□ 0
HERPUD1-219ENST00000570273 SUPT3HB4E1H0 165 aa15.08■□□□□ 0
HERPUD1-219ENST00000570273 IFRD1O00458 451 aaPredicted RBP15.08■□□□□ 0
HERPUD1-219ENST00000570273 SNX2O60749 519 aa15.08■□□□□ 0
HERPUD1-219ENST00000570273 SUPT3HO75486 399 aa15.08■□□□□ 0
HERPUD1-219ENST00000570273 DHRS4L1P0CG22 281 aa15.08■□□□□ 0
HERPUD1-219ENST00000570273 CTSEP14091 401 aa15.08■□□□□ 0
HERPUD1-219ENST00000570273 CPA3P15088 417 aa15.08■□□□□ 0
HERPUD1-219ENST00000570273 JUNDP17535 347 aa15.08■□□□□ 0
HERPUD1-219ENST00000570273 TAC1P20366 129 aa15.08■□□□□ 0
HERPUD1-219ENST00000570273 AK4P27144 223 aaPredicted RBP15.08■□□□□ 0
HERPUD1-219ENST00000570273 ACTR1BP42025 376 aa15.08■□□□□ 0
HERPUD1-219ENST00000570273 MAPK9P45984 424 aa15.08■□□□□ 0
HERPUD1-219ENST00000570273 CLCNKAP51800 687 aa15.08■□□□□ 0
HERPUD1-219ENST00000570273 GYS2P54840 703 aa15.08■□□□□ 0
HERPUD1-219ENST00000570273 ACTR1AP61163 376 aa15.08■□□□□ 0
HERPUD1-219ENST00000570273 METRNLQ641Q3 311 aa15.08■□□□□ 0
HERPUD1-219ENST00000570273 SLC30A9Q6PML9 568 aa15.08■□□□□ 0
HERPUD1-219ENST00000570273 ZYG11AQ6WRX3 759 aa15.08■□□□□ 0
HERPUD1-219ENST00000570273 UBE2R2Q712K3 238 aaPredicted RBP15.08■□□□□ 0
HERPUD1-219ENST00000570273 GPSM1Q86YR5 675 aa15.08■□□□□ 0
HERPUD1-219ENST00000570273 RMDN2Q96LZ7 410 aa15.08■□□□□ 0
HERPUD1-219ENST00000570273 ATOH8Q96SQ7 321 aa15.08■□□□□ 0
HERPUD1-219ENST00000570273 GSDMCQ9BYG8 508 aa15.08■□□□□ 0
HERPUD1-219ENST00000570273 COPG2Q9UBF2 871 aa15.08■□□□□ 0
HERPUD1-219ENST00000570273 KLF15Q9UIH9 416 aa15.08■□□□□ 0
HERPUD1-219ENST00000570273 PILRBQ9UKJ0 227 aa15.08■□□□□ 0
HERPUD1-219ENST00000570273 ADAMTS6Q9UKP5 1117 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms