RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 CBWD3Q5JTY5 395 aa7.02□□□□□ -1.29
CNOT1-216ENST00000569240 CBWD5Q5RIA9 395 aa7.02□□□□□ -1.29
CNOT1-216ENST00000569240 OGFOD2Q6N063 350 aa7.02□□□□□ -1.29
CNOT1-216ENST00000569240 FAM20CQ8IXL6 584 aa7.02□□□□□ -1.29
CNOT1-216ENST00000569240 WDSUB1Q8N9V3 476 aa7.02□□□□□ -1.29
CNOT1-216ENST00000569240 RHOXF1Q8NHV9 184 aa7.02□□□□□ -1.29
CNOT1-216ENST00000569240 SLC7A13Q8TCU3 470 aa7.02□□□□□ -1.29
CNOT1-216ENST00000569240 USP7Q93009 1102 aa7.02□□□□□ -1.29
CNOT1-216ENST00000569240 TNFRSF25Q93038 417 aa7.02□□□□□ -1.29
CNOT1-216ENST00000569240 LRRC58Q96CX6 371 aa7.02□□□□□ -1.29
CNOT1-216ENST00000569240 SH3YL1Q96HL8 342 aaPredicted RBP7.02□□□□□ -1.29
CNOT1-216ENST00000569240 GFM1Q96RP9 751 aaKnown RBP7.02□□□□□ -1.29
CNOT1-216ENST00000569240 SSX3Q99909 188 aa7.02□□□□□ -1.29
CNOT1-216ENST00000569240 PI4K2AQ9BTU6 479 aa7.02□□□□□ -1.29
CNOT1-216ENST00000569240 METTL8Q9H825 291 aaKnown RBP7.02□□□□□ -1.29
CNOT1-216ENST00000569240 MAN1C1Q9NR34 630 aa7.02□□□□□ -1.29
CNOT1-216ENST00000569240 SNTG1Q9NSN8 517 aa7.02□□□□□ -1.29
CNOT1-216ENST00000569240 HPF1Q9NWY4 346 aa7.02□□□□□ -1.29
CNOT1-216ENST00000569240 TRPC4Q9UBN4 977 aa7.02□□□□□ -1.29
CNOT1-216ENST00000569240 LCMT2O60294 686 aaKnown RBP7.02□□□□□ -1.29
CNOT1-216ENST00000569240 MT-ND1P03886 318 aa7.02□□□□□ -1.29
CNOT1-216ENST00000569240 IFI30P13284 250 aa7.02□□□□□ -1.29
CNOT1-216ENST00000569240 CSTF2P33240 577 aaKnown RBP eCLIP7.02□□□□□ -1.291e-7■□□□□ 9
CNOT1-216ENST00000569240 SAMD14Q8IZD0 417 aaPredicted RBP7.02□□□□□ -1.29
CNOT1-216ENST00000569240 ADAMTS16Q8TE57 1224 aa7.02□□□□□ -1.29
CNOT1-216ENST00000569240 TMEM209Q96SK2 561 aa7.02□□□□□ -1.29
CNOT1-216ENST00000569240 ARPC5LQ9BPX5 153 aa7.02□□□□□ -1.29
CNOT1-216ENST00000569240 FEM1AQ9BSK4 669 aa7.02□□□□□ -1.29
CNOT1-216ENST00000569240 WDR55Q9H6Y2 383 aaPredicted RBP7.02□□□□□ -1.29
CNOT1-216ENST00000569240 SCUBE2Q9NQ36 999 aa7.02□□□□□ -1.29
CNOT1-216ENST00000569240 SEMA3GQ9NS98 782 aa7.02□□□□□ -1.29
CNOT1-216ENST00000569240 TMEM39AQ9NV64 488 aa7.02□□□□□ -1.29
CNOT1-216ENST00000569240 SCP2D1Q9UJQ7 156 aa7.02□□□□□ -1.29
CNOT1-216ENST00000569240 CLDN24A6NM45 220 aa7.02□□□□□ -1.29
CNOT1-216ENST00000569240 BHMG1C9JSJ3 638 aaPredicted RBP7.02□□□□□ -1.29
CNOT1-216ENST00000569240 F5H423 210 aaPredicted RBP7.02□□□□□ -1.29
CNOT1-216ENST00000569240 ZSCAN5DPP0CG00 497 aa7.02□□□□□ -1.29
CNOT1-216ENST00000569240 NELFEP18615 380 aaKnown RBP7.02□□□□□ -1.29
CNOT1-216ENST00000569240 PRKAR1BP31321 381 aa7.02□□□□□ -1.29
CNOT1-216ENST00000569240 SOX11P35716 441 aa7.02□□□□□ -1.29
CNOT1-216ENST00000569240 LEPRP48357 1165 aaKnown RBP7.02□□□□□ -1.29
CNOT1-216ENST00000569240 NRIP1P48552 1158 aa7.02□□□□□ -1.29
CNOT1-216ENST00000569240 POU6F1Q14863 301 aa7.02□□□□□ -1.29
CNOT1-216ENST00000569240 ZNF613Q6PF04 617 aa7.02□□□□□ -1.29
CNOT1-216ENST00000569240 ZNF782Q6ZMW2 699 aaPredicted RBP7.02□□□□□ -1.29
CNOT1-216ENST00000569240 TFAP2DQ7Z6R9 452 aa7.02□□□□□ -1.29
CNOT1-216ENST00000569240 GALNT11Q8NCW6 608 aa7.02□□□□□ -1.29
CNOT1-216ENST00000569240 FAM136AQ96C01 138 aa7.02□□□□□ -1.29
CNOT1-216ENST00000569240 LURAP1Q96LR2 239 aa7.02□□□□□ -1.29
CNOT1-216ENST00000569240 PSD2Q9BQI7 771 aa7.02□□□□□ -1.29
CNOT1-216ENST00000569240 SLC29A3Q9BZD2 475 aa7.02□□□□□ -1.29
CNOT1-216ENST00000569240 OR51B5Q9H339 312 aa7.02□□□□□ -1.29
CNOT1-216ENST00000569240 PCDHB3Q9Y5E6 796 aa7.02□□□□□ -1.29
CNOT1-216ENST00000569240 SLC25A27O95847 323 aa7.02□□□□□ -1.29
CNOT1-216ENST00000569240 FGBP02675 491 aa7.02□□□□□ -1.29
CNOT1-216ENST00000569240 ICAM1P05362 532 aa7.02□□□□□ -1.29
CNOT1-216ENST00000569240 ZNF3P17036 446 aa7.02□□□□□ -1.29
CNOT1-216ENST00000569240 AZGP1P25311 298 aaKnown RBP7.02□□□□□ -1.29
CNOT1-216ENST00000569240 CRATP43155 626 aa7.02□□□□□ -1.29
CNOT1-216ENST00000569240 MARCKSL1P49006 195 aa7.02□□□□□ -1.29
CNOT1-216ENST00000569240 TGFB2P61812 414 aa7.02□□□□□ -1.29
CNOT1-216ENST00000569240 NAT8LQ8N9F0 302 aa7.02□□□□□ -1.29
CNOT1-216ENST00000569240 TMBIM1Q969X1 311 aa7.02□□□□□ -1.29
CNOT1-216ENST00000569240 TIFAQ96CG3 184 aa7.02□□□□□ -1.29
CNOT1-216ENST00000569240 IFT22Q9H7X7 185 aa7.02□□□□□ -1.29
CNOT1-216ENST00000569240 GFOD1Q9NXC2 390 aa7.02□□□□□ -1.29
CNOT1-216ENST00000569240 NWD1Q149M9 1564 aa7.01□□□□□ -1.29
CNOT1-216ENST00000569240 H3BMQ9 156 aa7.01□□□□□ -1.29
CNOT1-216ENST00000569240 CTPS1P17812 591 aa7.01□□□□□ -1.29
CNOT1-216ENST00000569240 S100PP25815 95 aa7.01□□□□□ -1.29
CNOT1-216ENST00000569240 CLK3P49761 638 aaKnown RBP7.01□□□□□ -1.29
CNOT1-216ENST00000569240 PLD1Q13393 1074 aa7.01□□□□□ -1.29
CNOT1-216ENST00000569240 SF3A2Q15428 464 aaKnown RBP7.01□□□□□ -1.29
CNOT1-216ENST00000569240 ZNF772Q68DY9 489 aaPredicted RBP7.01□□□□□ -1.29
CNOT1-216ENST00000569240 PLD6Q8N2A8 252 aaKnown RBP7.01□□□□□ -1.29
CNOT1-216ENST00000569240 SLC15A4Q8N697 577 aa7.01□□□□□ -1.29
CNOT1-216ENST00000569240 PIGXQ8TBF5 258 aa7.01□□□□□ -1.29
CNOT1-216ENST00000569240 COG8Q96MW5 612 aa7.01□□□□□ -1.29
CNOT1-216ENST00000569240 AP1S3Q96PC3 154 aa7.01□□□□□ -1.29
CNOT1-216ENST00000569240 FUZQ9BT04 418 aa7.01□□□□□ -1.29
CNOT1-216ENST00000569240 MECRQ9BV79 373 aa7.01□□□□□ -1.29
CNOT1-216ENST00000569240 TXLNGYQ9BZA5 131 aa7.01□□□□□ -1.29
CNOT1-216ENST00000569240 COQ4Q9Y3A0 265 aa7.01□□□□□ -1.29
CNOT1-216ENST00000569240 NUBP2Q9Y5Y2 271 aa7.01□□□□□ -1.29
CNOT1-216ENST00000569240 IFNA21P01568 189 aa7.01□□□□□ -1.29
CNOT1-216ENST00000569240 FGRP09769 529 aa7.01□□□□□ -1.29
CNOT1-216ENST00000569240 RYKP34925 604 aa7.01□□□□□ -1.29
CNOT1-216ENST00000569240 ABCG1P45844 678 aa7.01□□□□□ -1.29
CNOT1-216ENST00000569240 BMXP51813 675 aa7.01□□□□□ -1.29
CNOT1-216ENST00000569240 RPL38P63173 70 aaKnown RBP7.01□□□□□ -1.29
CNOT1-216ENST00000569240 BLOC1S1P78537 153 aa7.01□□□□□ -1.29
CNOT1-216ENST00000569240 LAPTM5Q13571 262 aa7.01□□□□□ -1.29
CNOT1-216ENST00000569240 DSG2Q14126 1118 aa7.01□□□□□ -1.29
CNOT1-216ENST00000569240 PON2Q15165 354 aa7.01□□□□□ -1.29
CNOT1-216ENST00000569240 CPTPQ5TA50 214 aa7.01□□□□□ -1.29
CNOT1-216ENST00000569240 MON1BQ7L1V2 547 aa7.01□□□□□ -1.29
CNOT1-216ENST00000569240 CEP97Q8IW35 865 aa7.01□□□□□ -1.29
CNOT1-216ENST00000569240 UBA3Q8TBC4 463 aa7.01□□□□□ -1.29
CNOT1-216ENST00000569240 POPDC3Q9HBV1 291 aa7.01□□□□□ -1.29
CNOT1-216ENST00000569240 ACTR10Q9NZ32 417 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms