RNA–Protein interactions for RNA: ENST00000567365.2

RNF40-211, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-211ENST00000567365 ESYT3A0FGR9 886 aa12.12□□□□□ -0.47
RNF40-211ENST00000567365 CTAGE15A4D2H0 777 aa12.12□□□□□ -0.47
RNF40-211ENST00000567365 CSO75390 466 aaKnown RBP12.12□□□□□ -0.47
RNF40-211ENST00000567365 SLCO2B1O94956 709 aa12.12□□□□□ -0.47
RNF40-211ENST00000567365 VIPP01282 170 aa12.12□□□□□ -0.47
RNF40-211ENST00000567365 ESR1P03372 595 aa12.12□□□□□ -0.47
RNF40-211ENST00000567365 F7P08709 466 aaPredicted RBP12.12□□□□□ -0.47
RNF40-211ENST00000567365 CTAGE8P0CG41 777 aa12.12□□□□□ -0.47
RNF40-211ENST00000567365 ERVK-10P10266 1014 aa12.12□□□□□ -0.47
RNF40-211ENST00000567365 JUPP14923 745 aa12.12□□□□□ -0.47
RNF40-211ENST00000567365 ALDH4A1P30038 563 aa12.12□□□□□ -0.47
RNF40-211ENST00000567365 ECHS1P30084 290 aa12.12□□□□□ -0.47
RNF40-211ENST00000567365 HALP42357 657 aa12.12□□□□□ -0.47
RNF40-211ENST00000567365 SLC1A2P43004 574 aa12.12□□□□□ -0.47
RNF40-211ENST00000567365 LEPRP48357 1165 aaKnown RBP12.12□□□□□ -0.47
RNF40-211ENST00000567365 PLTPP55058 493 aa12.12□□□□□ -0.47
RNF40-211ENST00000567365 PLOD1Q02809 727 aaPredicted RBP12.12□□□□□ -0.47
RNF40-211ENST00000567365 CAV1Q03135 178 aa12.12□□□□□ -0.47
RNF40-211ENST00000567365 CALCOCO2Q13137 446 aa12.12□□□□□ -0.47
RNF40-211ENST00000567365 THOC5Q13769 683 aaKnown RBP12.12□□□□□ -0.47
RNF40-211ENST00000567365 BOP1Q14137 746 aaKnown RBP12.12□□□□□ -0.47
RNF40-211ENST00000567365 SPIDRQ14159 915 aa12.12□□□□□ -0.47
RNF40-211ENST00000567365 GPR18Q14330 331 aa12.12□□□□□ -0.47
RNF40-211ENST00000567365 GLE1Q53GS7 698 aaKnown RBP12.12□□□□□ -0.47
RNF40-211ENST00000567365 HP1BP3Q5SSJ5 553 aaPredicted RBP12.12□□□□□ -0.47
RNF40-211ENST00000567365 TEDDM1Q5T9Z0 273 aa12.12□□□□□ -0.47
RNF40-211ENST00000567365 DUS1LQ6P1R4 473 aaKnown RBP12.12□□□□□ -0.47
RNF40-211ENST00000567365 NAPRTQ6XQN6 538 aa12.12□□□□□ -0.47
RNF40-211ENST00000567365 CTAGE6Q86UF2 777 aa12.12□□□□□ -0.47
RNF40-211ENST00000567365 PDZD3Q86UT5 571 aa12.12□□□□□ -0.47
RNF40-211ENST00000567365 ANKMY2Q8IV38 441 aa12.12□□□□□ -0.47
RNF40-211ENST00000567365 VRK3Q8IV63 474 aa12.12□□□□□ -0.47
RNF40-211ENST00000567365 CTAGE4Q8IX94 777 aa12.12□□□□□ -0.47
RNF40-211ENST00000567365 SLC22A15Q8IZD6 547 aa12.12□□□□□ -0.47
RNF40-211ENST00000567365 KRT222Q8N1A0 295 aa12.12□□□□□ -0.47
RNF40-211ENST00000567365 KDF1Q8NAX2 398 aaPredicted RBP12.12□□□□□ -0.47
RNF40-211ENST00000567365 FBXO36Q8NEA4 188 aa12.12□□□□□ -0.47
RNF40-211ENST00000567365 CALML6Q8TD86 181 aa12.12□□□□□ -0.47
RNF40-211ENST00000567365 ZFPM2Q8WW38 1151 aa12.12□□□□□ -0.47
RNF40-211ENST00000567365 ELMO1Q92556 727 aa12.12□□□□□ -0.47
RNF40-211ENST00000567365 DEPDC7Q96QD5 511 aa12.12□□□□□ -0.47
RNF40-211ENST00000567365 GFM1Q96RP9 751 aaKnown RBP12.12□□□□□ -0.47
RNF40-211ENST00000567365 SLC38A3Q99624 504 aa12.12□□□□□ -0.47
RNF40-211ENST00000567365 NUDT22Q9BRQ3 303 aa12.12□□□□□ -0.47
RNF40-211ENST00000567365 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.12□□□□□ -0.47
RNF40-211ENST00000567365 ABCG4Q9H172 646 aa12.12□□□□□ -0.47
RNF40-211ENST00000567365 EPB41L1Q9H4G0 881 aa12.12□□□□□ -0.47
RNF40-211ENST00000567365 GALPQ9UBC7 116 aa12.12□□□□□ -0.47
RNF40-211ENST00000567365 ZC3H7BQ9UGR2 993 aaKnown RBP12.12□□□□□ -0.47
RNF40-211ENST00000567365 GNPTGQ9UJJ9 305 aa12.12□□□□□ -0.47
RNF40-211ENST00000567365 CFAP20Q9Y6A4 193 aaKnown RBP12.12□□□□□ -0.47
RNF40-211ENST00000567365 UBA6A0AVT1 1052 aaPredicted RBP12.11□□□□□ -0.47
RNF40-211ENST00000567365 F8W8V4 182 aa12.11□□□□□ -0.47
RNF40-211ENST00000567365 NIPSNAP2O75323 286 aa12.11□□□□□ -0.47
RNF40-211ENST00000567365 HAUS5O94927 633 aa12.11□□□□□ -0.47
RNF40-211ENST00000567365 SLC35G4P0C7Q5 338 aa12.11□□□□□ -0.47
RNF40-211ENST00000567365 PKMP14618 531 aaKnown RBP12.11□□□□□ -0.47
RNF40-211ENST00000567365 EIF3BP55884 814 aaKnown RBP12.11□□□□□ -0.47
RNF40-211ENST00000567365 MPP1Q00013 466 aa12.11□□□□□ -0.47
RNF40-211ENST00000567365 TIAL1Q01085 375 aaKnown RBP eCLIP12.11□□□□□ -0.47
RNF40-211ENST00000567365 COL9A2Q14055 689 aaPredicted RBP12.11□□□□□ -0.47
RNF40-211ENST00000567365 RTP5Q14D33 572 aa12.11□□□□□ -0.47
RNF40-211ENST00000567365 NKAIN2Q5VXU1 208 aa12.11□□□□□ -0.47
RNF40-211ENST00000567365 CNSTQ6PJW8 725 aa12.11□□□□□ -0.47
RNF40-211ENST00000567365 WDR74Q6RFH5 385 aaPredicted RBP12.11□□□□□ -0.47
RNF40-211ENST00000567365 KIAA0408Q6ZU52 694 aa12.11□□□□□ -0.47
RNF40-211ENST00000567365 CYS1Q717R9 158 aa12.11□□□□□ -0.47
RNF40-211ENST00000567365 RASGRP3Q8IV61 690 aa12.11□□□□□ -0.47
RNF40-211ENST00000567365 CEP112Q8N8E3 955 aa12.11□□□□□ -0.47
RNF40-211ENST00000567365 LRRN4CLQ8ND94 238 aa12.11□□□□□ -0.47
RNF40-211ENST00000567365 ASZ1Q8WWH4 475 aa12.11□□□□□ -0.47
RNF40-211ENST00000567365 CXorf40BQ96DE9 158 aa12.11□□□□□ -0.47
RNF40-211ENST00000567365 LIN37Q96GY3 246 aaPredicted RBP12.11□□□□□ -0.47
RNF40-211ENST00000567365 PRR11Q96HE9 360 aaPredicted RBP12.11□□□□□ -0.47
RNF40-211ENST00000567365 C12orf66Q96MD2 445 aa12.11□□□□□ -0.47
RNF40-211ENST00000567365 FAM167BQ9BTA0 163 aa12.11□□□□□ -0.47
RNF40-211ENST00000567365 MCMBPQ9BTE3 642 aa12.11□□□□□ -0.47
RNF40-211ENST00000567365 FOXP3Q9BZS1 431 aa12.11□□□□□ -0.47
RNF40-211ENST00000567365 RAB33BQ9H082 229 aa12.11□□□□□ -0.47
RNF40-211ENST00000567365 STN1Q9H668 368 aaKnown RBP12.11□□□□□ -0.47
RNF40-211ENST00000567365 KIR3DX1Q9H7L2 352 aa12.11□□□□□ -0.47
RNF40-211ENST00000567365 RDH14Q9HBH5 336 aa12.11□□□□□ -0.47
RNF40-211ENST00000567365 FBXO6Q9NRD1 293 aaPredicted RBP12.11□□□□□ -0.47
RNF40-211ENST00000567365 IARS2Q9NSE4 1012 aaKnown RBP12.11□□□□□ -0.47
RNF40-211ENST00000567365 KCNK4Q9NYG8 393 aa12.11□□□□□ -0.47
RNF40-211ENST00000567365 KLHL42Q9P2K6 505 aa12.11□□□□□ -0.47
RNF40-211ENST00000567365 VPS9D1Q9Y2B5 631 aa12.11□□□□□ -0.47
RNF40-211ENST00000567365 CRYL1Q9Y2S2 319 aa12.11□□□□□ -0.47
RNF40-211ENST00000567365 MN1Q10571 1320 aaPredicted RBP12.11□□□□□ -0.47
RNF40-211ENST00000567365 ACACAQ13085 2346 aa12.1□□□□□ -0.47
RNF40-211ENST00000567365 IGHV5-10-1A0A0J9YXX1 117 aa12.1□□□□□ -0.47
RNF40-211ENST00000567365 TRABD2BA6NFA1 517 aa12.1□□□□□ -0.47
RNF40-211ENST00000567365 H3BMM5 538 aa12.1□□□□□ -0.47
RNF40-211ENST00000567365 C9P02748 559 aa12.1□□□□□ -0.47
RNF40-211ENST00000567365 AHSGP02765 367 aa12.1□□□□□ -0.47
RNF40-211ENST00000567365 TPBGLP0DKB5 382 aa12.1□□□□□ -0.47
RNF40-211ENST00000567365 THRAP10827 490 aa12.1□□□□□ -0.47
RNF40-211ENST00000567365 ITGB6P18564 788 aa12.1□□□□□ -0.47
RNF40-211ENST00000567365 FMO4P31512 558 aa12.1□□□□□ -0.47
RNF40-211ENST00000567365 CLCN7P51798 805 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms