RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 DCUN1D1Q96GG9 259 aa23.12■■□□□ 1.29
RAB40C-209ENST00000565511 CD180Q99467 661 aa23.12■■□□□ 1.29
RAB40C-209ENST00000565511 COPS8Q99627 209 aa23.12■■□□□ 1.29
RAB40C-209ENST00000565511 OR52A5Q9H2C5 316 aa23.12■■□□□ 1.29
RAB40C-209ENST00000565511 COG4Q9H9E3 785 aa23.12■■□□□ 1.29
RAB40C-209ENST00000565511 PDE7BQ9NP56 450 aa23.12■■□□□ 1.29
RAB40C-209ENST00000565511 TP53TG5Q9Y2B4 290 aa23.12■■□□□ 1.29
RAB40C-209ENST00000565511 RELNP78509 3460 aa23.12■■□□□ 1.29
RAB40C-209ENST00000565511 UBA6A0AVT1 1052 aaPredicted RBP23.11■■□□□ 1.29
RAB40C-209ENST00000565511 CCDC78A2IDD5 438 aa23.11■■□□□ 1.29
RAB40C-209ENST00000565511 CDC14CA4D256 554 aa23.11■■□□□ 1.29
RAB40C-209ENST00000565511 ATP1B2P14415 290 aaPredicted RBP23.11■■□□□ 1.29
RAB40C-209ENST00000565511 PREPP48147 710 aa23.11■■□□□ 1.29
RAB40C-209ENST00000565511 SERPINA9Q86WD7 417 aa23.11■■□□□ 1.29
RAB40C-209ENST00000565511 SLC38A9Q8NBW4 561 aa23.11■■□□□ 1.29
RAB40C-209ENST00000565511 OR4E2Q8NGC2 313 aa23.11■■□□□ 1.29
RAB40C-209ENST00000565511 SLC35B2Q8TB61 432 aa23.11■■□□□ 1.29
RAB40C-209ENST00000565511 ZNF501Q96CX3 271 aaPredicted RBP23.11■■□□□ 1.29
RAB40C-209ENST00000565511 CALR3Q96L12 384 aaKnown RBP23.11■■□□□ 1.29
RAB40C-209ENST00000565511 FERMT1Q9BQL6 677 aa23.11■■□□□ 1.29
RAB40C-209ENST00000565511 ACTL8Q9H568 366 aa23.11■■□□□ 1.29
RAB40C-209ENST00000565511 ZDHHC3Q9NYG2 299 aa23.11■■□□□ 1.29
RAB40C-209ENST00000565511 AMFRQ9UKV5 643 aa23.11■■□□□ 1.29
RAB40C-209ENST00000565511 PADI1Q9ULC6 663 aa23.11■■□□□ 1.29
RAB40C-209ENST00000565511 PCDHGA6Q9Y5G7 932 aa23.11■■□□□ 1.29
RAB40C-209ENST00000565511 FER1L5A0AVI2 2057 aa23.11■■□□□ 1.29
RAB40C-209ENST00000565511 DOPEY2Q9Y3R5 2298 aa23.11■■□□□ 1.29
RAB40C-209ENST00000565511 SNRNP200O75643 2136 aaKnown RBP23.11■■□□□ 1.29
RAB40C-209ENST00000565511 CREG1O75629 220 aa23.1■■□□□ 1.29
RAB40C-209ENST00000565511 IPO7O95373 1038 aaKnown RBP23.1■■□□□ 1.29
RAB40C-209ENST00000565511 ACRV1P26436 265 aa23.1■■□□□ 1.29
RAB40C-209ENST00000565511 HSD11B2P80365 405 aa23.1■■□□□ 1.29
RAB40C-209ENST00000565511 ACY1Q03154 408 aa23.1■■□□□ 1.29
RAB40C-209ENST00000565511 GPS2Q13227 327 aa23.1■■□□□ 1.29
RAB40C-209ENST00000565511 SEPT6Q14141 434 aa23.1■■□□□ 1.29
RAB40C-209ENST00000565511 POU6F1Q14863 301 aa23.1■■□□□ 1.29
RAB40C-209ENST00000565511 DBN1Q16643 649 aa23.1■■□□□ 1.29
RAB40C-209ENST00000565511 PARP6Q2NL67 630 aa23.1■■□□□ 1.29
RAB40C-209ENST00000565511 ZRANB3Q5FWF4 1079 aa23.1■■□□□ 1.29
RAB40C-209ENST00000565511 LCN10Q6JVE6 187 aa23.1■■□□□ 1.29
RAB40C-209ENST00000565511 ARHGEF18Q6ZSZ5 1173 aa23.1■■□□□ 1.29
RAB40C-209ENST00000565511 PEX26Q7Z412 305 aa23.1■■□□□ 1.29
RAB40C-209ENST00000565511 KIAA1328Q86T90 577 aa23.1■■□□□ 1.29
RAB40C-209ENST00000565511 KMT5CQ86Y97 462 aa23.1■■□□□ 1.29
RAB40C-209ENST00000565511 CLDN19Q8N6F1 224 aa23.1■■□□□ 1.29
RAB40C-209ENST00000565511 TMEM121Q9BTD3 319 aa23.1■■□□□ 1.29
RAB40C-209ENST00000565511 TLR10Q9BXR5 811 aa23.1■■□□□ 1.29
RAB40C-209ENST00000565511 NLE1Q9NVX2 485 aaPredicted RBP23.1■■□□□ 1.29
RAB40C-209ENST00000565511 POMT2Q9UKY4 750 aa23.1■■□□□ 1.29
RAB40C-209ENST00000565511 PRSS21Q9Y6M0 314 aa23.1■■□□□ 1.29
RAB40C-209ENST00000565511 CAPN6Q9Y6Q1 641 aa23.1■■□□□ 1.29
RAB40C-209ENST00000565511 OR51F1A6NGY5 319 aa23.09■■□□□ 1.29
RAB40C-209ENST00000565511 H7C0S8 307 aa23.09■■□□□ 1.29
RAB40C-209ENST00000565511 BTN3A3O00478 584 aa23.09■■□□□ 1.29
RAB40C-209ENST00000565511 HADHAP40939 763 aa23.09■■□□□ 1.29
RAB40C-209ENST00000565511 PDE1BQ01064 536 aa23.09■■□□□ 1.29
RAB40C-209ENST00000565511 ABRQ12979 859 aa23.09■■□□□ 1.29
RAB40C-209ENST00000565511 GSE1Q14687 1217 aa23.09■■□□□ 1.29
RAB40C-209ENST00000565511 PHC3Q8NDX5 983 aa23.09■■□□□ 1.29
RAB40C-209ENST00000565511 ZFPM2Q8WW38 1151 aa23.09■■□□□ 1.29
RAB40C-209ENST00000565511 ATG4AQ8WYN0 398 aa23.09■■□□□ 1.29
RAB40C-209ENST00000565511 BAG1Q99933 345 aaPredicted RBP23.09■■□□□ 1.29
RAB40C-209ENST00000565511 TWSG1Q9GZX9 223 aa23.09■■□□□ 1.29
RAB40C-209ENST00000565511 BTRCQ9Y297 605 aa23.09■■□□□ 1.29
RAB40C-209ENST00000565511 PCSK5Q92824 1860 aa23.09■■□□□ 1.29
RAB40C-209ENST00000565511 KLHL33A6NCF5 533 aa23.08■■□□□ 1.29
RAB40C-209ENST00000565511 SLC9B1P1A6NJY1 282 aa23.08■■□□□ 1.29
RAB40C-209ENST00000565511 BTN3A1O00481 513 aa23.08■■□□□ 1.29
RAB40C-209ENST00000565511 DNAJB5O75953 348 aa23.08■■□□□ 1.29
RAB40C-209ENST00000565511 ZBTB11O95625 1053 aaPredicted RBP23.08■■□□□ 1.29
RAB40C-209ENST00000565511 PDGFAP04085 211 aa23.08■■□□□ 1.29
RAB40C-209ENST00000565511 CCNYL3P0C7X3 344 aa23.08■■□□□ 1.29
RAB40C-209ENST00000565511 RALBP11234 206 aa23.08■■□□□ 1.29
RAB40C-209ENST00000565511 ARL4DP49703 201 aa23.08■■□□□ 1.29
RAB40C-209ENST00000565511 TUBB4BP68371 445 aa23.08■■□□□ 1.29
RAB40C-209ENST00000565511 IL10RAQ13651 578 aa23.08■■□□□ 1.29
RAB40C-209ENST00000565511 TUBB2AQ13885 445 aa23.08■■□□□ 1.29
RAB40C-209ENST00000565511 IGFBP7Q16270 282 aa23.08■■□□□ 1.29
RAB40C-209ENST00000565511 LACTB2Q53H82 288 aaPredicted RBP23.08■■□□□ 1.29
RAB40C-209ENST00000565511 C19orf43Q9BQ61 176 aa23.08■■□□□ 1.29
RAB40C-209ENST00000565511 TUBB2BQ9BVA1 445 aa23.08■■□□□ 1.29
RAB40C-209ENST00000565511 TRIM55Q9BYV6 548 aa23.08■■□□□ 1.29
RAB40C-209ENST00000565511 XKR8Q9H6D3 395 aa23.08■■□□□ 1.29
RAB40C-209ENST00000565511 LRRC40Q9H9A6 602 aa23.08■■□□□ 1.29
RAB40C-209ENST00000565511 FEZ2Q9UHY8 353 aaPredicted RBP23.08■■□□□ 1.29
RAB40C-209ENST00000565511 KCND3Q9UK17 655 aa23.08■■□□□ 1.29
RAB40C-209ENST00000565511 POLHQ9Y253 713 aa23.08■■□□□ 1.29
RAB40C-209ENST00000565511 SEC16AO15027 2179 aa23.07■■□□□ 1.28
RAB40C-209ENST00000565511 PIPSLA2A3N6 862 aa23.07■■□□□ 1.28
RAB40C-209ENST00000565511 CFAP99D6REC4 459 aa23.07■■□□□ 1.28
RAB40C-209ENST00000565511 SCRG1O75711 98 aa23.07■■□□□ 1.28
RAB40C-209ENST00000565511 AP2A1O95782 977 aa23.07■■□□□ 1.28
RAB40C-209ENST00000565511 MT-ND3P03897 115 aa23.07■■□□□ 1.28
RAB40C-209ENST00000565511 PVRP15151 417 aa23.07■■□□□ 1.28
RAB40C-209ENST00000565511 ST6GAL1P15907 406 aa23.07■■□□□ 1.28
RAB40C-209ENST00000565511 CASRP41180 1078 aa23.07■■□□□ 1.28
RAB40C-209ENST00000565511 CETN2P41208 172 aa23.07■■□□□ 1.28
RAB40C-209ENST00000565511 GPR33Q49SQ1 333 aa23.07■■□□□ 1.28
RAB40C-209ENST00000565511 CCDC38Q502W7 563 aa23.07■■□□□ 1.28
RAB40C-209ENST00000565511 ZNF789Q5FWF6 425 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms