RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-215ENST00000565442 TOMM70O94826 608 aa4.25□□□□□ -1.73
CHD9-215ENST00000565442 SLCO2B1O94956 709 aa4.25□□□□□ -1.73
CHD9-215ENST00000565442 LIPFP07098 398 aa4.25□□□□□ -1.73
CHD9-215ENST00000565442 AHRP35869 848 aa4.25□□□□□ -1.73
CHD9-215ENST00000565442 ZNF132P52740 706 aa4.25□□□□□ -1.73
CHD9-215ENST00000565442 CSE1LP55060 971 aaKnown RBP4.25□□□□□ -1.73
CHD9-215ENST00000565442 CDK3Q00526 305 aa4.25□□□□□ -1.73
CHD9-215ENST00000565442 COASYQ13057 564 aa4.25□□□□□ -1.73
CHD9-215ENST00000565442 CAMK2DQ13557 499 aa4.25□□□□□ -1.73
CHD9-215ENST00000565442 RNASEH2BQ5TBB1 312 aaKnown RBP4.25□□□□□ -1.73
CHD9-215ENST00000565442 NDUFAF5Q5TEU4 345 aa4.25□□□□□ -1.73
CHD9-215ENST00000565442 KRT80Q6KB66 452 aa4.25□□□□□ -1.73
CHD9-215ENST00000565442 TUBA1AQ71U36 451 aa4.25□□□□□ -1.73
CHD9-215ENST00000565442 CUZD1Q86UP6 607 aa4.25□□□□□ -1.73
CHD9-215ENST00000565442 IQCHQ86VS3 1027 aa4.25□□□□□ -1.73
CHD9-215ENST00000565442 PTOV1Q86YD1 416 aa4.25□□□□□ -1.73
CHD9-215ENST00000565442 MUC20Q8N307 709 aaPredicted RBP4.25□□□□□ -1.73
CHD9-215ENST00000565442 SECTM1Q8WVN6 248 aa4.25□□□□□ -1.73
CHD9-215ENST00000565442 SMPDL3BQ92485 455 aa4.25□□□□□ -1.73
CHD9-215ENST00000565442 DAZLQ92904 295 aaKnown RBP4.25□□□□□ -1.73
CHD9-215ENST00000565442 MS4A10Q96PG2 267 aa4.25□□□□□ -1.73
CHD9-215ENST00000565442 DUX5Q96PT3 197 aa4.25□□□□□ -1.73
CHD9-215ENST00000565442 TUBA1CQ9BQE3 449 aa4.25□□□□□ -1.73
CHD9-215ENST00000565442 POLR3CQ9BUI4 534 aaPredicted RBP4.25□□□□□ -1.73
CHD9-215ENST00000565442 MOV10L1Q9BXT6 1211 aaKnown RBP4.25□□□□□ -1.73
CHD9-215ENST00000565442 DPAGT1Q9H3H5 408 aa4.25□□□□□ -1.73
CHD9-215ENST00000565442 OPA3Q9H6K4 179 aa4.25□□□□□ -1.73
CHD9-215ENST00000565442 CNOT10Q9H9A5 744 aaKnown RBP4.25□□□□□ -1.73
CHD9-215ENST00000565442 EQTNQ9NQ60 294 aa4.25□□□□□ -1.73
CHD9-215ENST00000565442 KLHL1Q9NR64 748 aa4.25□□□□□ -1.73
CHD9-215ENST00000565442 DDX25Q9UHL0 483 aaKnown RBP4.25□□□□□ -1.73
CHD9-215ENST00000565442 ERRFI1Q9UJM3 462 aaPredicted RBP4.25□□□□□ -1.73
CHD9-215ENST00000565442 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.25□□□□□ -1.737e-7■■□□□ 11.9
CHD9-215ENST00000565442 ASPDHA6ND91 283 aa4.24□□□□□ -1.73
CHD9-215ENST00000565442 C15orf62A8K5M9 175 aa4.24□□□□□ -1.73
CHD9-215ENST00000565442 GPR137BO60478 399 aa4.24□□□□□ -1.73
CHD9-215ENST00000565442 TFAP2AP05549 437 aa4.24□□□□□ -1.73
CHD9-215ENST00000565442 MMP15P51511 669 aa4.24□□□□□ -1.73
CHD9-215ENST00000565442 TCP11X2Q5H9J9 407 aa4.24□□□□□ -1.73
CHD9-215ENST00000565442 ARMC3Q5W041 872 aa4.24□□□□□ -1.73
CHD9-215ENST00000565442 FAM109BQ6ICB4 259 aaPredicted RBP4.24□□□□□ -1.73
CHD9-215ENST00000565442 KLC3Q6P597 504 aa4.24□□□□□ -1.73
CHD9-215ENST00000565442 DSG4Q86SJ6 1040 aa4.24□□□□□ -1.73
CHD9-215ENST00000565442 NR2C2APQ86WQ0 139 aa4.24□□□□□ -1.73
CHD9-215ENST00000565442 FAM114A1Q8IWE2 563 aa4.24□□□□□ -1.73
CHD9-215ENST00000565442 Q8NFD4 153 aa4.24□□□□□ -1.73
CHD9-215ENST00000565442 RDM1Q8NG50 284 aa4.24□□□□□ -1.73
CHD9-215ENST00000565442 EXD1Q8NHP7 514 aa4.24□□□□□ -1.73
CHD9-215ENST00000565442 MRPS27Q92552 414 aaKnown RBP4.24□□□□□ -1.73
CHD9-215ENST00000565442 MTERF3Q96E29 417 aa4.24□□□□□ -1.73
CHD9-215ENST00000565442 SLX1AQ9BQ83 275 aa4.24□□□□□ -1.73
CHD9-215ENST00000565442 NOL11Q9H8H0 719 aaKnown RBP4.24□□□□□ -1.73
CHD9-215ENST00000565442 ZCCHC17Q9NP64 241 aaKnown RBP4.24□□□□□ -1.73
CHD9-215ENST00000565442 OSGIN1Q9UJX0 560 aa4.24□□□□□ -1.73
CHD9-215ENST00000565442 SPIN1Q9Y657 262 aaPredicted RBP4.24□□□□□ -1.73
CHD9-215ENST00000565442 NOTCH3Q9UM47 2321 aa4.23□□□□□ -1.73
CHD9-215ENST00000565442 A0A0G2JNG1 304 aa4.23□□□□□ -1.73
CHD9-215ENST00000565442 TEX13DA0A0J9YY54 714 aaPredicted RBP4.23□□□□□ -1.73
CHD9-215ENST00000565442 ELOVL7A1L3X0 281 aa4.23□□□□□ -1.73
CHD9-215ENST00000565442 CTAGE9A4FU28 777 aa4.23□□□□□ -1.73
CHD9-215ENST00000565442 SMTNL1A8MU46 457 aa4.23□□□□□ -1.73
CHD9-215ENST00000565442 NTN3O00634 580 aaPredicted RBP4.23□□□□□ -1.73
CHD9-215ENST00000565442 SYNCRIPO60506 623 aaKnown RBP4.23□□□□□ -1.73
CHD9-215ENST00000565442 TSPAN1O60635 241 aa4.23□□□□□ -1.73
CHD9-215ENST00000565442 MED24O75448 989 aa4.23□□□□□ -1.73
CHD9-215ENST00000565442 C22orf31O95567 290 aa4.23□□□□□ -1.73
CHD9-215ENST00000565442 SNRNP70P08621 437 aaKnown RBP4.23□□□□□ -1.73
CHD9-215ENST00000565442 CTAGE8P0CG41 777 aa4.23□□□□□ -1.73
CHD9-215ENST00000565442 FGF3P11487 239 aaPredicted RBP4.23□□□□□ -1.73
CHD9-215ENST00000565442 CBLP22681 906 aa4.23□□□□□ -1.73
CHD9-215ENST00000565442 MCCP23508 829 aa4.23□□□□□ -1.73
CHD9-215ENST00000565442 RAD23AP54725 363 aa4.23□□□□□ -1.73
CHD9-215ENST00000565442 MLLT10P55197 1068 aa4.23□□□□□ -1.73
CHD9-215ENST00000565442 KIR2DS5Q14953 304 aa4.23□□□□□ -1.73
CHD9-215ENST00000565442 NR1D2Q14995 579 aa4.23□□□□□ -1.73
CHD9-215ENST00000565442 PSMD6Q15008 389 aa4.23□□□□□ -1.73
CHD9-215ENST00000565442 FAM133BQ5BKY9 247 aaKnown RBP4.23□□□□□ -1.73
CHD9-215ENST00000565442 KRBOX4Q5JUW0 171 aa4.23□□□□□ -1.73
CHD9-215ENST00000565442 SPSB3Q6PJ21 355 aa4.23□□□□□ -1.73
CHD9-215ENST00000565442 KCTD8Q6ZWB6 473 aa4.23□□□□□ -1.73
CHD9-215ENST00000565442 PIWIL4Q7Z3Z4 852 aaKnown RBP4.23□□□□□ -1.73
CHD9-215ENST00000565442 CENPVQ7Z7K6 275 aaPredicted RBP4.23□□□□□ -1.73
CHD9-215ENST00000565442 LONP2Q86WA8 852 aa4.23□□□□□ -1.73
CHD9-215ENST00000565442 CTAGE4Q8IX94 777 aa4.23□□□□□ -1.73
CHD9-215ENST00000565442 KBTBD3Q8NAB2 608 aa4.23□□□□□ -1.73
CHD9-215ENST00000565442 SLC4A11Q8NBS3 891 aa4.23□□□□□ -1.73
CHD9-215ENST00000565442 ZNF653Q96CK0 615 aa4.23□□□□□ -1.73
CHD9-215ENST00000565442 ZMAT2Q96NC0 199 aaKnown RBP4.23□□□□□ -1.73
CHD9-215ENST00000565442 ABHD6Q9BV23 337 aa4.23□□□□□ -1.73
CHD9-215ENST00000565442 FAM129AQ9BZQ8 928 aa4.23□□□□□ -1.73
CHD9-215ENST00000565442 ST6GALNAC4Q9H4F1 302 aa4.23□□□□□ -1.73
CHD9-215ENST00000565442 RETREG1Q9H6L5 497 aa4.23□□□□□ -1.73
CHD9-215ENST00000565442 EVA1AQ9H8M9 152 aa4.23□□□□□ -1.73
CHD9-215ENST00000565442 ANKZF1Q9H8Y5 726 aa4.23□□□□□ -1.73
CHD9-215ENST00000565442 PRMT7Q9NVM4 692 aaPredicted RBP4.23□□□□□ -1.73
CHD9-215ENST00000565442 PTTG2Q9NZH5 202 aa4.23□□□□□ -1.73
CHD9-215ENST00000565442 SLC24A2Q9UI40 661 aa4.23□□□□□ -1.73
CHD9-215ENST00000565442 CCL27Q9Y4X3 112 aa4.23□□□□□ -1.73
CHD9-215ENST00000565442 A0A1W2PPM1 405 aa4.22□□□□□ -1.73
CHD9-215ENST00000565442 ACOT8O14734 319 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms