RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 KIAA0319Q5VV43 1072 aa16.04■□□□□ 0.16
LINC00554-201ENST00000564841 NAPEPLDQ6IQ20 393 aa16.04■□□□□ 0.16
LINC00554-201ENST00000564841 SVOPQ8N4V2 548 aa16.04■□□□□ 0.16
LINC00554-201ENST00000564841 RASSF1Q9NS23 344 aa16.04■□□□□ 0.16
LINC00554-201ENST00000564841 DDIT4Q9NX09 232 aa16.04■□□□□ 0.16
LINC00554-201ENST00000564841 RNF186Q9NXI6 227 aa16.04■□□□□ 0.16
LINC00554-201ENST00000564841 CRYL1Q9Y2S2 319 aa16.04■□□□□ 0.16
LINC00554-201ENST00000564841 PCDHB14Q9Y5E9 798 aa16.04■□□□□ 0.16
LINC00554-201ENST00000564841 MAU2Q9Y6X3 613 aa16.04■□□□□ 0.16
LINC00554-201ENST00000564841 A0A0U1RQS6 177 aa16.04■□□□□ 0.16
LINC00554-201ENST00000564841 OR51F1A6NGY5 319 aa16.04■□□□□ 0.16
LINC00554-201ENST00000564841 AGAP5A6NIR3 686 aa16.04■□□□□ 0.16
LINC00554-201ENST00000564841 DFFAO00273 331 aa16.04■□□□□ 0.16
LINC00554-201ENST00000564841 PPP2R2BQ00005 443 aa16.04■□□□□ 0.16
LINC00554-201ENST00000564841 CHRNB3Q05901 458 aa16.04■□□□□ 0.16
LINC00554-201ENST00000564841 PAFAH1B3Q15102 231 aaKnown RBP16.04■□□□□ 0.16
LINC00554-201ENST00000564841 ZFP69Q49AA0 526 aa16.04■□□□□ 0.16
LINC00554-201ENST00000564841 PRSS36Q5K4E3 855 aa16.04■□□□□ 0.16
LINC00554-201ENST00000564841 ISCA2Q86U28 154 aa16.04■□□□□ 0.16
LINC00554-201ENST00000564841 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.04■□□□□ 0.16
LINC00554-201ENST00000564841 RNF34Q969K3 372 aa16.04■□□□□ 0.16
LINC00554-201ENST00000564841 TBCDQ9BTW9 1192 aa16.04■□□□□ 0.16
LINC00554-201ENST00000564841 TRIM54Q9BYV2 358 aa16.04■□□□□ 0.16
LINC00554-201ENST00000564841 RUBCNLQ9H714 662 aa16.04■□□□□ 0.16
LINC00554-201ENST00000564841 GPBP1L1Q9HC44 474 aaPredicted RBP16.04■□□□□ 0.16
LINC00554-201ENST00000564841 FAM105AQ9NUU6 356 aa16.04■□□□□ 0.16
LINC00554-201ENST00000564841 OSGIN1Q9UJX0 560 aa16.04■□□□□ 0.16
LINC00554-201ENST00000564841 GPR45Q9Y5Y3 372 aa16.04■□□□□ 0.16
LINC00554-201ENST00000564841 F8W810 466 aa16.03■□□□□ 0.16
LINC00554-201ENST00000564841 AZIN1O14977 448 aa16.03■□□□□ 0.16
LINC00554-201ENST00000564841 CA12O43570 354 aa16.03■□□□□ 0.16
LINC00554-201ENST00000564841 UMPSP11172 480 aa16.03■□□□□ 0.16
LINC00554-201ENST00000564841 LBPP18428 481 aa16.03■□□□□ 0.16
LINC00554-201ENST00000564841 ACVR2AP27037 513 aa16.03■□□□□ 0.16
LINC00554-201ENST00000564841 CLK1P49759 484 aaKnown RBP16.03■□□□□ 0.16
LINC00554-201ENST00000564841 ATP4BP51164 291 aa16.03■□□□□ 0.16
LINC00554-201ENST00000564841 ZNF135P52742 658 aaPredicted RBP16.03■□□□□ 0.16
LINC00554-201ENST00000564841 GNG2P59768 71 aa16.03■□□□□ 0.16
LINC00554-201ENST00000564841 CDC42EP1Q00587 391 aa16.03■□□□□ 0.16
LINC00554-201ENST00000564841 UGP2Q16851 508 aa16.03■□□□□ 0.16
LINC00554-201ENST00000564841 ALKAL1Q6UXT8 129 aa16.03■□□□□ 0.16
LINC00554-201ENST00000564841 GOLM1Q8NBJ4 401 aa16.03■□□□□ 0.16
LINC00554-201ENST00000564841 PABPC5Q96DU9 382 aaKnown RBP16.03■□□□□ 0.16
LINC00554-201ENST00000564841 KIAA1257Q9ULG3 409 aa16.03■□□□□ 0.16
LINC00554-201ENST00000564841 A0A087X1B8 175 aa16.03■□□□□ 0.16
LINC00554-201ENST00000564841 A0A0X1KG70 313 aa16.03■□□□□ 0.16
LINC00554-201ENST00000564841 PIRO00625 290 aa16.03■□□□□ 0.16
LINC00554-201ENST00000564841 RBP1P09455 135 aa16.03■□□□□ 0.16
LINC00554-201ENST00000564841 DGKQP52824 942 aa16.03■□□□□ 0.16
LINC00554-201ENST00000564841 TPI1P60174 286 aa16.03■□□□□ 0.16
LINC00554-201ENST00000564841 CDK10Q15131 360 aa16.03■□□□□ 0.16
LINC00554-201ENST00000564841 CRY1Q16526 586 aa16.03■□□□□ 0.16
LINC00554-201ENST00000564841 PCSK7Q16549 785 aa16.03■□□□□ 0.16
LINC00554-201ENST00000564841 ZNF404Q494X3 552 aa16.03■□□□□ 0.16
LINC00554-201ENST00000564841 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.03■□□□□ 0.16
LINC00554-201ENST00000564841 LACC1Q8IV20 430 aa16.03■□□□□ 0.16
LINC00554-201ENST00000564841 ERVK13-1Q9NX77 482 aa16.03■□□□□ 0.16
LINC00554-201ENST00000564841 LIMD1Q9UGP4 676 aa16.03■□□□□ 0.16
LINC00554-201ENST00000564841 ANGPTL3Q9Y5C1 460 aa16.03■□□□□ 0.16
LINC00554-201ENST00000564841 TFECO14948 347 aaPredicted RBP16.03■□□□□ 0.16
LINC00554-201ENST00000564841 UBL4AP11441 157 aa16.03■□□□□ 0.16
LINC00554-201ENST00000564841 HTR3AP46098 478 aa16.03■□□□□ 0.16
LINC00554-201ENST00000564841 GABARAPL2P60520 117 aa16.03■□□□□ 0.16
LINC00554-201ENST00000564841 SLC25A52Q3SY17 297 aa16.03■□□□□ 0.16
LINC00554-201ENST00000564841 PCID2Q5JVF3 399 aa16.03■□□□□ 0.16
LINC00554-201ENST00000564841 B3GALNT2Q8NCR0 500 aa16.03■□□□□ 0.16
LINC00554-201ENST00000564841 C3orf58Q8NDZ4 430 aa16.03■□□□□ 0.16
LINC00554-201ENST00000564841 SH3GL1Q99961 368 aa16.03■□□□□ 0.16
LINC00554-201ENST00000564841 A0A0G2JMP0 313 aa16.02■□□□□ 0.16
LINC00554-201ENST00000564841 CENPXA8MT69 81 aa16.02■□□□□ 0.16
LINC00554-201ENST00000564841 CYP7B1O75881 506 aa16.02■□□□□ 0.16
LINC00554-201ENST00000564841 RAP2AP10114 183 aa16.02■□□□□ 0.16
LINC00554-201ENST00000564841 LIPAP38571 399 aa16.02■□□□□ 0.16
LINC00554-201ENST00000564841 BCL7AQ4VC05 210 aa16.02■□□□□ 0.16
LINC00554-201ENST00000564841 TPRG1LQ5T0D9 272 aa16.02■□□□□ 0.16
LINC00554-201ENST00000564841 ZNF691Q5VV52 312 aa16.02■□□□□ 0.16
LINC00554-201ENST00000564841 LRRC52Q8N7C0 313 aa16.02■□□□□ 0.16
LINC00554-201ENST00000564841 ZNF540Q8NDQ6 660 aa16.02■□□□□ 0.16
LINC00554-201ENST00000564841 MED30Q96HR3 178 aa16.02■□□□□ 0.16
LINC00554-201ENST00000564841 MAP6Q96JE9 813 aa16.02■□□□□ 0.16
LINC00554-201ENST00000564841 ST6GAL2Q96JF0 529 aa16.02■□□□□ 0.16
LINC00554-201ENST00000564841 TEKT5Q96M29 485 aa16.02■□□□□ 0.16
LINC00554-201ENST00000564841 FYTTD1Q96QD9 318 aaKnown RBP16.02■□□□□ 0.16
LINC00554-201ENST00000564841 AMBNQ9NP70 447 aa16.02■□□□□ 0.16
LINC00554-201ENST00000564841 COQ3Q9NZJ6 369 aa16.02■□□□□ 0.16
LINC00554-201ENST00000564841 NAALAD2Q9Y3Q0 740 aa16.02■□□□□ 0.16
LINC00554-201ENST00000564841 LOC100506127A0A0U1RQW1 187 aa16.02■□□□□ 0.15
LINC00554-201ENST00000564841 B3GAT3O94766 335 aa16.02■□□□□ 0.15
LINC00554-201ENST00000564841 NDST3O95803 873 aa16.02■□□□□ 0.15
LINC00554-201ENST00000564841 CYBAP13498 195 aa16.02■□□□□ 0.15
LINC00554-201ENST00000564841 GRK5P34947 590 aa16.02■□□□□ 0.15
LINC00554-201ENST00000564841 ST13P50502 369 aaKnown RBP16.02■□□□□ 0.15
LINC00554-201ENST00000564841 TRAF3Q13114 568 aa16.02■□□□□ 0.15
LINC00554-201ENST00000564841 FAM98BQ52LJ0 330 aaKnown RBP16.02■□□□□ 0.15
LINC00554-201ENST00000564841 DENND5AQ6IQ26 1287 aa16.02■□□□□ 0.15
LINC00554-201ENST00000564841 CYP20A1Q6UW02 462 aa16.02■□□□□ 0.15
LINC00554-201ENST00000564841 PRR23CQ6ZRP0 262 aa16.02■□□□□ 0.15
LINC00554-201ENST00000564841 C2CD4AQ8NCU7 369 aaPredicted RBP16.02■□□□□ 0.15
LINC00554-201ENST00000564841 SENP8Q96LD8 212 aa16.02■□□□□ 0.15
LINC00554-201ENST00000564841 COQ7Q99807 217 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms