RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 IFRD1O00458 451 aaPredicted RBP11.87□□□□□ -0.51
GTF3C1-204ENST00000564664 LDB2O43679 373 aa11.87□□□□□ -0.51
GTF3C1-204ENST00000564664 SGTAO43765 313 aa11.87□□□□□ -0.51
GTF3C1-204ENST00000564664 AP2A2O94973 939 aa11.87□□□□□ -0.51
GTF3C1-204ENST00000564664 POLBP06746 335 aa11.87□□□□□ -0.51
GTF3C1-204ENST00000564664 MSL3P1P0C860 447 aa11.87□□□□□ -0.51
GTF3C1-204ENST00000564664 PSMA3P25788 255 aa11.87□□□□□ -0.51
GTF3C1-204ENST00000564664 STIP1P31948 543 aaKnown RBP11.87□□□□□ -0.51
GTF3C1-204ENST00000564664 GSDMDP57764 484 aa11.87□□□□□ -0.51
GTF3C1-204ENST00000564664 RPS15P62841 145 aaKnown RBP11.87□□□□□ -0.51
GTF3C1-204ENST00000564664 NFKB2Q00653 900 aa11.87□□□□□ -0.51
GTF3C1-204ENST00000564664 KIF5AQ12840 1032 aa11.87□□□□□ -0.51
GTF3C1-204ENST00000564664 LACTB2Q53H82 288 aaPredicted RBP11.87□□□□□ -0.51
GTF3C1-204ENST00000564664 TCTN3Q6NUS6 607 aa11.87□□□□□ -0.51
GTF3C1-204ENST00000564664 KIAA1328Q86T90 577 aa11.87□□□□□ -0.51
GTF3C1-204ENST00000564664 LINC00523Q86TU6 105 aa11.87□□□□□ -0.51
GTF3C1-204ENST00000564664 APLFQ8IW19 511 aaPredicted RBP11.87□□□□□ -0.51
GTF3C1-204ENST00000564664 OR13C4Q8NGS5 318 aa11.87□□□□□ -0.51
GTF3C1-204ENST00000564664 STYXQ8WUJ0 223 aa11.87□□□□□ -0.51
GTF3C1-204ENST00000564664 ALG3Q92685 438 aa11.87□□□□□ -0.51
GTF3C1-204ENST00000564664 ALS2CR12Q96Q35 445 aa11.87□□□□□ -0.51
GTF3C1-204ENST00000564664 BAG1Q99933 345 aaPredicted RBP11.87□□□□□ -0.51
GTF3C1-204ENST00000564664 APOL2Q9BQE5 337 aa11.87□□□□□ -0.51
GTF3C1-204ENST00000564664 LACRTQ9GZZ8 138 aa11.87□□□□□ -0.51
GTF3C1-204ENST00000564664 TFB2MQ9H5Q4 396 aaKnown RBP11.87□□□□□ -0.51
GTF3C1-204ENST00000564664 MVB12BQ9H7P6 319 aa11.87□□□□□ -0.51
GTF3C1-204ENST00000564664 FANCEQ9HB96 536 aa11.87□□□□□ -0.51
GTF3C1-204ENST00000564664 NLE1Q9NVX2 485 aaPredicted RBP11.87□□□□□ -0.51
GTF3C1-204ENST00000564664 BTRCQ9Y297 605 aa11.87□□□□□ -0.51
GTF3C1-204ENST00000564664 REXO2Q9Y3B8 237 aaKnown RBP11.87□□□□□ -0.51
GTF3C1-204ENST00000564664 CFAP20Q9Y6A4 193 aaKnown RBP11.87□□□□□ -0.51
GTF3C1-204ENST00000564664 ERI2A8K979 691 aaKnown RBP11.86□□□□□ -0.51
GTF3C1-204ENST00000564664 F8W8V4 182 aa11.86□□□□□ -0.51
GTF3C1-204ENST00000564664 CPNE3O75131 537 aaKnown RBP11.86□□□□□ -0.51
GTF3C1-204ENST00000564664 KLK3P07288 261 aaPredicted RBP11.86□□□□□ -0.51
GTF3C1-204ENST00000564664 EBLN1P0CF75 366 aa11.86□□□□□ -0.51
GTF3C1-204ENST00000564664 ACRV1P26436 265 aa11.86□□□□□ -0.51
GTF3C1-204ENST00000564664 PTPN4P29074 926 aa11.86□□□□□ -0.51
GTF3C1-204ENST00000564664 MC4RP32245 332 aa11.86□□□□□ -0.51
GTF3C1-204ENST00000564664 PPP1CAP62136 330 aa11.86□□□□□ -0.51
GTF3C1-204ENST00000564664 PLOD1Q02809 727 aaPredicted RBP11.86□□□□□ -0.51
GTF3C1-204ENST00000564664 TLE1Q04724 770 aa11.86□□□□□ -0.51
GTF3C1-204ENST00000564664 CACNG1Q06432 222 aa11.86□□□□□ -0.51
GTF3C1-204ENST00000564664 ERV3-1Q14264 604 aa11.86□□□□□ -0.51
GTF3C1-204ENST00000564664 SKIDA1Q1XH10 827 aa11.86□□□□□ -0.51
GTF3C1-204ENST00000564664 RAD9BQ6WBX8 426 aa11.86□□□□□ -0.51
GTF3C1-204ENST00000564664 ZNF517Q6ZMY9 492 aaPredicted RBP11.86□□□□□ -0.51
GTF3C1-204ENST00000564664 SYVN1Q86TM6 617 aa11.86□□□□□ -0.51
GTF3C1-204ENST00000564664 PTRH1Q86Y79 214 aaKnown RBP11.86□□□□□ -0.51
GTF3C1-204ENST00000564664 RNF10Q8N5U6 811 aaKnown RBP11.86□□□□□ -0.51
GTF3C1-204ENST00000564664 FAM71DQ8N9W8 422 aa11.86□□□□□ -0.51
GTF3C1-204ENST00000564664 SPDYE1Q8NFV5 336 aaPredicted RBP11.86□□□□□ -0.51
GTF3C1-204ENST00000564664 OR4E2Q8NGC2 313 aa11.86□□□□□ -0.51
GTF3C1-204ENST00000564664 CT55Q8WUE5 264 aa11.86□□□□□ -0.51
GTF3C1-204ENST00000564664 LCN9Q8WX39 176 aa11.86□□□□□ -0.51
GTF3C1-204ENST00000564664 ZNF501Q96CX3 271 aaPredicted RBP11.86□□□□□ -0.51
GTF3C1-204ENST00000564664 CDKN2AIPNLQ96HQ2 116 aa11.86□□□□□ -0.51
GTF3C1-204ENST00000564664 FERD3LQ96RJ6 166 aa11.86□□□□□ -0.51
GTF3C1-204ENST00000564664 FRMD8P1Q9BZ68 369 aaPredicted RBP11.86□□□□□ -0.51
GTF3C1-204ENST00000564664 TWSG1Q9GZX9 223 aa11.86□□□□□ -0.51
GTF3C1-204ENST00000564664 SRMSQ9H3Y6 488 aa11.86□□□□□ -0.51
GTF3C1-204ENST00000564664 COG4Q9H9E3 785 aa11.86□□□□□ -0.51
GTF3C1-204ENST00000564664 POMT2Q9UKY4 750 aa11.86□□□□□ -0.51
GTF3C1-204ENST00000564664 FARSAQ9Y285 508 aaKnown RBP11.86□□□□□ -0.51
GTF3C1-204ENST00000564664 MRPS18BQ9Y676 258 aaKnown RBP11.86□□□□□ -0.51
GTF3C1-204ENST00000564664 ZNF106Q9H2Y7 1883 aaKnown RBP11.86□□□□□ -0.51
GTF3C1-204ENST00000564664 SEC16AO15027 2179 aa11.85□□□□□ -0.51
GTF3C1-204ENST00000564664 ARHGAP6O43182 974 aa11.85□□□□□ -0.51
GTF3C1-204ENST00000564664 RFPL1O75677 317 aa11.85□□□□□ -0.51
GTF3C1-204ENST00000564664 SCRG1O75711 98 aa11.85□□□□□ -0.51
GTF3C1-204ENST00000564664 TIAF1O95411 115 aa11.85□□□□□ -0.51
GTF3C1-204ENST00000564664 AP2A1O95782 977 aa11.85□□□□□ -0.51
GTF3C1-204ENST00000564664 GAS8O95995 478 aa11.85□□□□□ -0.51
GTF3C1-204ENST00000564664 NTRK1P04629 796 aa11.85□□□□□ -0.51
GTF3C1-204ENST00000564664 RAB40ALP0C0E4 278 aa11.85□□□□□ -0.51
GTF3C1-204ENST00000564664 CDH3P22223 829 aa11.85□□□□□ -0.51
GTF3C1-204ENST00000564664 NSG1P42857 185 aa11.85□□□□□ -0.51
GTF3C1-204ENST00000564664 KPNA2P52292 529 aaKnown RBP11.85□□□□□ -0.51
GTF3C1-204ENST00000564664 PMS2P54278 862 aa11.85□□□□□ -0.51
GTF3C1-204ENST00000564664 TMPRSS15P98073 1019 aa11.85□□□□□ -0.51
GTF3C1-204ENST00000564664 KLRB1Q12918 225 aa11.85□□□□□ -0.51
GTF3C1-204ENST00000564664 KLF1Q13351 362 aaPredicted RBP11.85□□□□□ -0.51
GTF3C1-204ENST00000564664 SPARCL1Q14515 664 aa11.85□□□□□ -0.51
GTF3C1-204ENST00000564664 ITIH4Q14624 930 aa11.85□□□□□ -0.51
GTF3C1-204ENST00000564664 KCNAB1Q14722 419 aa11.85□□□□□ -0.51
GTF3C1-204ENST00000564664 UGT8Q16880 541 aa11.85□□□□□ -0.51
GTF3C1-204ENST00000564664 ZNF658BQ4V348 819 aaPredicted RBP11.85□□□□□ -0.51
GTF3C1-204ENST00000564664 ZRANB3Q5FWF4 1079 aa11.85□□□□□ -0.51
GTF3C1-204ENST00000564664 LYPLAL1Q5VWZ2 237 aa11.85□□□□□ -0.51
GTF3C1-204ENST00000564664 IZUMO3Q5VZ72 239 aa11.85□□□□□ -0.51
GTF3C1-204ENST00000564664 TAS2R42Q7RTR8 314 aa11.85□□□□□ -0.51
GTF3C1-204ENST00000564664 SERPINA9Q86WD7 417 aa11.85□□□□□ -0.51
GTF3C1-204ENST00000564664 TMEM126BQ8IUX1 230 aa11.85□□□□□ -0.51
GTF3C1-204ENST00000564664 SLC35B2Q8TB61 432 aa11.85□□□□□ -0.51
GTF3C1-204ENST00000564664 CPT1BQ92523 772 aa11.85□□□□□ -0.51
GTF3C1-204ENST00000564664 RMDN2Q96LZ7 410 aa11.85□□□□□ -0.51
GTF3C1-204ENST00000564664 TTC1Q99614 292 aa11.85□□□□□ -0.51
GTF3C1-204ENST00000564664 OR52A5Q9H2C5 316 aa11.85□□□□□ -0.51
GTF3C1-204ENST00000564664 ZNF71Q9NQZ8 489 aaPredicted RBP11.85□□□□□ -0.51
GTF3C1-204ENST00000564664 IMPACTQ9P2X3 320 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms