RNA–Protein interactions for RNA: ENST00000564557.1

CNOT1-206, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-206ENST00000564557 CD151P48509 253 aa13.34□□□□□ -0.27
CNOT1-206ENST00000564557 GFERP55789 205 aa13.34□□□□□ -0.27
CNOT1-206ENST00000564557 KCTD19Q17RG1 926 aaPredicted RBP13.34□□□□□ -0.27
CNOT1-206ENST00000564557 CACHD1Q5VU97 1274 aa13.34□□□□□ -0.27
CNOT1-206ENST00000564557 ARMC3Q5W041 872 aa13.34□□□□□ -0.27
CNOT1-206ENST00000564557 PAPD7Q5XG87 772 aaKnown RBP13.34□□□□□ -0.27
CNOT1-206ENST00000564557 PTRHD1Q6GMV3 140 aaKnown RBP13.34□□□□□ -0.27
CNOT1-206ENST00000564557 CAPRIN2Q6IMN6 1127 aaKnown RBP13.34□□□□□ -0.27
CNOT1-206ENST00000564557 DUS1LQ6P1R4 473 aaKnown RBP13.34□□□□□ -0.27
CNOT1-206ENST00000564557 MICALCLQ6ZW33 695 aa13.34□□□□□ -0.27
CNOT1-206ENST00000564557 ZNF534Q76KX8 674 aa13.34□□□□□ -0.27
CNOT1-206ENST00000564557 ARHGAP22Q7Z5H3 698 aa13.34□□□□□ -0.27
CNOT1-206ENST00000564557 PCGF5Q86SE9 256 aa13.34□□□□□ -0.27
CNOT1-206ENST00000564557 OOSP2Q86WS3 158 aa13.34□□□□□ -0.27
CNOT1-206ENST00000564557 PPIL6Q8IXY8 311 aa13.34□□□□□ -0.27
CNOT1-206ENST00000564557 MPP5Q8N3R9 675 aa13.34□□□□□ -0.27
CNOT1-206ENST00000564557 LILRA3Q8N6C8 439 aaPredicted RBP13.34□□□□□ -0.27
CNOT1-206ENST00000564557 MCUQ8NE86 351 aa13.34□□□□□ -0.27
CNOT1-206ENST00000564557 JPH3Q8WXH2 748 aaPredicted RBP13.34□□□□□ -0.27
CNOT1-206ENST00000564557 CPT1BQ92523 772 aa13.34□□□□□ -0.27
CNOT1-206ENST00000564557 RSC1A1Q92681 617 aa13.34□□□□□ -0.27
CNOT1-206ENST00000564557 C9orf72Q96LT7 481 aa13.34□□□□□ -0.27
CNOT1-206ENST00000564557 RMDN2Q96LZ7 410 aa13.34□□□□□ -0.27
CNOT1-206ENST00000564557 TEFMQ96QE5 360 aaKnown RBP13.34□□□□□ -0.27
CNOT1-206ENST00000564557 KIFC1Q9BW19 673 aa13.34□□□□□ -0.27
CNOT1-206ENST00000564557 HRASLS2Q9NWW9 162 aa13.34□□□□□ -0.27
CNOT1-206ENST00000564557 OCIAD1Q9NX40 245 aa13.34□□□□□ -0.27
CNOT1-206ENST00000564557 PRSS21Q9Y6M0 314 aa13.34□□□□□ -0.27
CNOT1-206ENST00000564557 MN1Q10571 1320 aaPredicted RBP13.34□□□□□ -0.27
CNOT1-206ENST00000564557 ASPMQ8IZT6 3477 aa13.33□□□□□ -0.27
CNOT1-206ENST00000564557 UBA6A0AVT1 1052 aaPredicted RBP13.33□□□□□ -0.28
CNOT1-206ENST00000564557 PRMT5O14744 637 aaPredicted RBP13.33□□□□□ -0.28
CNOT1-206ENST00000564557 KDM1AO60341 852 aa13.33□□□□□ -0.28
CNOT1-206ENST00000564557 OR1I1O60431 355 aa13.33□□□□□ -0.28
CNOT1-206ENST00000564557 AVILO75366 819 aa13.33□□□□□ -0.28
CNOT1-206ENST00000564557 C9P02748 559 aa13.33□□□□□ -0.28
CNOT1-206ENST00000564557 LIPCP11150 499 aa13.33□□□□□ -0.28
CNOT1-206ENST00000564557 ITGB6P18564 788 aa13.33□□□□□ -0.28
CNOT1-206ENST00000564557 PREPP48147 710 aa13.33□□□□□ -0.28
CNOT1-206ENST00000564557 SEPHS1P49903 392 aa13.33□□□□□ -0.28
CNOT1-206ENST00000564557 TMPRSS3P57727 454 aa13.33□□□□□ -0.28
CNOT1-206ENST00000564557 FOXM1Q08050 763 aa13.33□□□□□ -0.28
CNOT1-206ENST00000564557 THOC5Q13769 683 aaKnown RBP13.33□□□□□ -0.28
CNOT1-206ENST00000564557 TMED2Q15363 201 aa13.33□□□□□ -0.28
CNOT1-206ENST00000564557 DNTTIP2Q5QJE6 756 aaKnown RBP13.33□□□□□ -0.28
CNOT1-206ENST00000564557 ANKRD22Q5VYY1 191 aa13.33□□□□□ -0.28
CNOT1-206ENST00000564557 CYB5D1Q6P9G0 228 aa13.33□□□□□ -0.28
CNOT1-206ENST00000564557 CES3Q6UWW8 571 aa13.33□□□□□ -0.28
CNOT1-206ENST00000564557 CEACAM20Q6UY09 585 aa13.33□□□□□ -0.28
CNOT1-206ENST00000564557 FAM92BQ6ZTR7 304 aa13.33□□□□□ -0.28
CNOT1-206ENST00000564557 LDB1Q86U70 411 aaPredicted RBP13.33□□□□□ -0.28
CNOT1-206ENST00000564557 KLHL7Q8IXQ5 586 aa13.33□□□□□ -0.28
CNOT1-206ENST00000564557 ACVR1CQ8NER5 493 aa13.33□□□□□ -0.28
CNOT1-206ENST00000564557 LCN9Q8WX39 176 aa13.33□□□□□ -0.28
CNOT1-206ENST00000564557 TFGQ92734 400 aaPredicted RBP13.33□□□□□ -0.28
CNOT1-206ENST00000564557 MFSD3Q96ES6 412 aa13.33□□□□□ -0.28
CNOT1-206ENST00000564557 PANX3Q96QZ0 392 aa13.33□□□□□ -0.28
CNOT1-206ENST00000564557 ZPBPQ9BS86 351 aa13.33□□□□□ -0.28
CNOT1-206ENST00000564557 DDA1Q9BW61 102 aa13.33□□□□□ -0.28
CNOT1-206ENST00000564557 OR52A5Q9H2C5 316 aa13.33□□□□□ -0.28
CNOT1-206ENST00000564557 SRMSQ9H3Y6 488 aa13.33□□□□□ -0.28
CNOT1-206ENST00000564557 KIR3DX1Q9H7L2 352 aa13.33□□□□□ -0.28
CNOT1-206ENST00000564557 MVB12BQ9H7P6 319 aa13.33□□□□□ -0.28
CNOT1-206ENST00000564557 TREX1Q9NSU2 369 aa13.33□□□□□ -0.28
CNOT1-206ENST00000564557 OGFRQ9NZT2 677 aa13.33□□□□□ -0.28
CNOT1-206ENST00000564557 RNF14Q9UBS8 474 aa13.33□□□□□ -0.28
CNOT1-206ENST00000564557 EPHA6Q9UF33 1036 aa13.33□□□□□ -0.28
CNOT1-206ENST00000564557 SLC24A2Q9UI40 661 aa13.33□□□□□ -0.28
CNOT1-206ENST00000564557 GNPTGQ9UJJ9 305 aa13.33□□□□□ -0.28
CNOT1-206ENST00000564557 ASF1AQ9Y294 204 aa13.33□□□□□ -0.28
CNOT1-206ENST00000564557 PCDHGA10Q9Y5H3 936 aa13.33□□□□□ -0.28
CNOT1-206ENST00000564557 MAD1L1Q9Y6D9 718 aa13.33□□□□□ -0.28
CNOT1-206ENST00000564557 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.33□□□□□ -0.28
CNOT1-206ENST00000564557 USP24Q9UPU5 2620 aa13.33□□□□□ -0.28
CNOT1-206ENST00000564557 PIKFYVEQ9Y2I7 2098 aa13.32□□□□□ -0.28
CNOT1-206ENST00000564557 OR6C74A6NCV1 312 aa13.32□□□□□ -0.28
CNOT1-206ENST00000564557 OR5K3A6NET4 321 aa13.32□□□□□ -0.28
CNOT1-206ENST00000564557 C9orf172C9J069 976 aa13.32□□□□□ -0.28
CNOT1-206ENST00000564557 STMND1H3BQB6 276 aa13.32□□□□□ -0.28
CNOT1-206ENST00000564557 CCDC188H7C350 402 aa13.32□□□□□ -0.28
CNOT1-206ENST00000564557 POLR1CO15160 346 aaPredicted RBP13.32□□□□□ -0.28
CNOT1-206ENST00000564557 MAP3K7O43318 606 aa13.32□□□□□ -0.28
CNOT1-206ENST00000564557 APOA4P06727 396 aa13.32□□□□□ -0.28
CNOT1-206ENST00000564557 ANKRD34CP0C6C1 535 aa13.32□□□□□ -0.28
CNOT1-206ENST00000564557 PDHA2P29803 388 aa13.32□□□□□ -0.28
CNOT1-206ENST00000564557 CASQ1P31415 396 aa13.32□□□□□ -0.28
CNOT1-206ENST00000564557 LEPRP48357 1165 aaKnown RBP13.32□□□□□ -0.28
CNOT1-206ENST00000564557 ATP1A2P50993 1020 aa13.32□□□□□ -0.28
CNOT1-206ENST00000564557 CSE1LP55060 971 aaKnown RBP13.32□□□□□ -0.28
CNOT1-206ENST00000564557 CXADRP78310 365 aa13.32□□□□□ -0.28
CNOT1-206ENST00000564557 MC2RQ01718 297 aa13.32□□□□□ -0.28
CNOT1-206ENST00000564557 TLE3Q04726 772 aa13.32□□□□□ -0.28
CNOT1-206ENST00000564557 DHX34Q14147 1143 aaKnown RBP13.32□□□□□ -0.28
CNOT1-206ENST00000564557 RNF187Q5TA31 235 aaPredicted RBP13.32□□□□□ -0.28
CNOT1-206ENST00000564557 PDZD3Q86UT5 571 aa13.32□□□□□ -0.28
CNOT1-206ENST00000564557 LRRC6Q86X45 466 aa13.32□□□□□ -0.28
CNOT1-206ENST00000564557 ZFAND4Q86XD8 727 aa13.32□□□□□ -0.28
CNOT1-206ENST00000564557 PHC3Q8NDX5 983 aa13.32□□□□□ -0.28
CNOT1-206ENST00000564557 OR4E2Q8NGC2 313 aa13.32□□□□□ -0.28
CNOT1-206ENST00000564557 ASZ1Q8WWH4 475 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms