RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 F8A1P23610 371 aa17.23■□□□□ 0.35
NME3-205ENST00000563854 NDUFS1P28331 727 aa17.23■□□□□ 0.35
NME3-205ENST00000563854 OAS2P29728 719 aaKnown RBP17.23■□□□□ 0.35
NME3-205ENST00000563854 PREPP48147 710 aa17.23■□□□□ 0.35
NME3-205ENST00000563854 CACNG1Q06432 222 aa17.23■□□□□ 0.35
NME3-205ENST00000563854 PRKAA1Q13131 559 aa17.23■□□□□ 0.35
NME3-205ENST00000563854 KCNAB2Q13303 367 aa17.23■□□□□ 0.35
NME3-205ENST00000563854 DBN1Q16643 649 aa17.23■□□□□ 0.35
NME3-205ENST00000563854 ZNF449Q6P9G9 518 aa17.23■□□□□ 0.35
NME3-205ENST00000563854 FBXO38Q6PIJ6 1188 aa17.23■□□□□ 0.35
NME3-205ENST00000563854 PPP1R21Q6ZMI0 780 aa17.23■□□□□ 0.35
NME3-205ENST00000563854 RNF10Q8N5U6 811 aaKnown RBP17.23■□□□□ 0.35
NME3-205ENST00000563854 OR4E2Q8NGC2 313 aa17.23■□□□□ 0.35
NME3-205ENST00000563854 STYXQ8WUJ0 223 aa17.23■□□□□ 0.35
NME3-205ENST00000563854 C1orf54Q8WWF1 131 aa17.23■□□□□ 0.35
NME3-205ENST00000563854 CDKN2AIPNLQ96HQ2 116 aa17.23■□□□□ 0.35
NME3-205ENST00000563854 SLC41A2Q96JW4 573 aa17.23■□□□□ 0.35
NME3-205ENST00000563854 CD180Q99467 661 aa17.23■□□□□ 0.35
NME3-205ENST00000563854 STARD5Q9NSY2 213 aa17.23■□□□□ 0.35
NME3-205ENST00000563854 GEMIN8Q9NWZ8 242 aaKnown RBP17.23■□□□□ 0.35
NME3-205ENST00000563854 SMARCAL1Q9NZC9 954 aa17.23■□□□□ 0.35
NME3-205ENST00000563854 ZNF148Q9UQR1 794 aa17.23■□□□□ 0.35
NME3-205ENST00000563854 HEBP2Q9Y5Z4 205 aa17.23■□□□□ 0.35
NME3-205ENST00000563854 BOD1L1Q8NFC6 3051 aa17.22■□□□□ 0.35
NME3-205ENST00000563854 GSAPA4D1B5 854 aa17.22■□□□□ 0.35
NME3-205ENST00000563854 LIASO43766 372 aa17.22■□□□□ 0.35
NME3-205ENST00000563854 KRT86O43790 486 aa17.22■□□□□ 0.35
NME3-205ENST00000563854 GAS8O95995 478 aa17.22■□□□□ 0.35
NME3-205ENST00000563854 CCNYL3P0C7X3 344 aa17.22■□□□□ 0.35
NME3-205ENST00000563854 ITGB6P18564 788 aa17.22■□□□□ 0.35
NME3-205ENST00000563854 MSNP26038 577 aaKnown RBP17.22■□□□□ 0.35
NME3-205ENST00000563854 KPNA2P52292 529 aaKnown RBP17.22■□□□□ 0.35
NME3-205ENST00000563854 MC1RQ01726 317 aa17.22■□□□□ 0.35
NME3-205ENST00000563854 ACY1Q03154 408 aa17.22■□□□□ 0.35
NME3-205ENST00000563854 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.22■□□□□ 0.35
NME3-205ENST00000563854 CAPRIN2Q6IMN6 1127 aaKnown RBP17.22■□□□□ 0.35
NME3-205ENST00000563854 PRUNE1Q86TP1 453 aa17.22■□□□□ 0.35
NME3-205ENST00000563854 LINC00523Q86TU6 105 aa17.22■□□□□ 0.35
NME3-205ENST00000563854 PIANPQ8IYJ0 282 aa17.22■□□□□ 0.35
NME3-205ENST00000563854 LCN9Q8WX39 176 aa17.22■□□□□ 0.35
NME3-205ENST00000563854 PPM1MQ96MI6 270 aa17.22■□□□□ 0.35
NME3-205ENST00000563854 C19orf43Q9BQ61 176 aa17.22■□□□□ 0.35
NME3-205ENST00000563854 HGH1Q9BTY7 390 aa17.22■□□□□ 0.35
NME3-205ENST00000563854 SLC25A18Q9H1K4 315 aa17.22■□□□□ 0.35
NME3-205ENST00000563854 SRMSQ9H3Y6 488 aa17.22■□□□□ 0.35
NME3-205ENST00000563854 FGF21Q9NSA1 209 aa17.22■□□□□ 0.35
NME3-205ENST00000563854 PCDHB3Q9Y5E6 796 aa17.22■□□□□ 0.35
NME3-205ENST00000563854 IGLV3-16A0A075B6K0 115 aa17.21■□□□□ 0.35
NME3-205ENST00000563854 TRBV5-4A0A0C4DH59 114 aa17.21■□□□□ 0.35
NME3-205ENST00000563854 H7C0S8 307 aa17.21■□□□□ 0.35
NME3-205ENST00000563854 NTRK1P04629 796 aa17.21■□□□□ 0.35
NME3-205ENST00000563854 CDH3P22223 829 aa17.21■□□□□ 0.35
NME3-205ENST00000563854 PDHA2P29803 388 aa17.21■□□□□ 0.35
NME3-205ENST00000563854 HSD11B2P80365 405 aa17.21■□□□□ 0.35
NME3-205ENST00000563854 BRD3Q15059 726 aa17.21■□□□□ 0.35
NME3-205ENST00000563854 GPR19Q15760 415 aa17.21■□□□□ 0.35
NME3-205ENST00000563854 PWWP2BQ6NUJ5 590 aa17.21■□□□□ 0.35
NME3-205ENST00000563854 PTRH1Q86Y79 214 aaKnown RBP17.21■□□□□ 0.35
NME3-205ENST00000563854 KMT5CQ86Y97 462 aa17.21■□□□□ 0.35
NME3-205ENST00000563854 SLC13A5Q86YT5 568 aaPredicted RBP17.21■□□□□ 0.35
NME3-205ENST00000563854 PHC3Q8NDX5 983 aa17.21■□□□□ 0.35
NME3-205ENST00000563854 ACVR1CQ8NER5 493 aa17.21■□□□□ 0.35
NME3-205ENST00000563854 ZFPM2Q8WW38 1151 aa17.21■□□□□ 0.35
NME3-205ENST00000563854 ADNPQ9H2P0 1102 aa17.21■□□□□ 0.35
NME3-205ENST00000563854 ETNK1Q9HBU6 452 aa17.21■□□□□ 0.35
NME3-205ENST00000563854 C17orf113A0A1B0GUU1 675 aa17.2■□□□□ 0.34
NME3-205ENST00000563854 CCDC162PA2VCL2 907 aa17.2■□□□□ 0.34
NME3-205ENST00000563854 ZBTB11O95625 1053 aaPredicted RBP17.2■□□□□ 0.34
NME3-205ENST00000563854 MT-ND3P03897 115 aa17.2■□□□□ 0.34
NME3-205ENST00000563854 ETS1P14921 441 aa17.2■□□□□ 0.34
NME3-205ENST00000563854 FDFT1P37268 417 aa17.2■□□□□ 0.34
NME3-205ENST00000563854 GSDMDP57764 484 aa17.2■□□□□ 0.34
NME3-205ENST00000563854 CDH17Q12864 832 aa17.2■□□□□ 0.34
NME3-205ENST00000563854 PRKG2Q13237 762 aa17.2■□□□□ 0.34
NME3-205ENST00000563854 ERV3-1Q14264 604 aa17.2■□□□□ 0.34
NME3-205ENST00000563854 RPS6KA1Q15418 735 aa17.2■□□□□ 0.34
NME3-205ENST00000563854 OASLQ15646 514 aaKnown RBP17.2■□□□□ 0.34
NME3-205ENST00000563854 SKIDA1Q1XH10 827 aa17.2■□□□□ 0.34
NME3-205ENST00000563854 TMTC4Q5T4D3 741 aa17.2■□□□□ 0.34
NME3-205ENST00000563854 TMEM126BQ8IUX1 230 aa17.2■□□□□ 0.34
NME3-205ENST00000563854 CCDC89Q8N998 374 aa17.2■□□□□ 0.34
NME3-205ENST00000563854 CT55Q8WUE5 264 aa17.2■□□□□ 0.34
NME3-205ENST00000563854 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.2■□□□□ 0.34
NME3-205ENST00000563854 NRTNQ99748 197 aa17.2■□□□□ 0.34
NME3-205ENST00000563854 TLR10Q9BXR5 811 aa17.2■□□□□ 0.34
NME3-205ENST00000563854 OR52A5Q9H2C5 316 aa17.2■□□□□ 0.34
NME3-205ENST00000563854 RAB6BQ9NRW1 208 aa17.2■□□□□ 0.34
NME3-205ENST00000563854 SEMA5BQ9P283 1151 aa17.2■□□□□ 0.34
NME3-205ENST00000563854 PADI1Q9ULC6 663 aa17.2■□□□□ 0.34
NME3-205ENST00000563854 PRSS21Q9Y6M0 314 aa17.2■□□□□ 0.34
NME3-205ENST00000563854 CDC14CA4D256 554 aa17.19■□□□□ 0.34
NME3-205ENST00000563854 STIP1P31948 543 aaKnown RBP17.19■□□□□ 0.34
NME3-205ENST00000563854 GRIA1P42261 906 aa17.19■□□□□ 0.34
NME3-205ENST00000563854 DNASE1L3Q13609 305 aa17.19■□□□□ 0.34
NME3-205ENST00000563854 BOP1Q14137 746 aaKnown RBP17.19■□□□□ 0.34
NME3-205ENST00000563854 SYTL3Q4VX76 610 aa17.19■□□□□ 0.34
NME3-205ENST00000563854 NAPRTQ6XQN6 538 aa17.19■□□□□ 0.34
NME3-205ENST00000563854 D2HGDHQ8N465 521 aa17.19■□□□□ 0.34
NME3-205ENST00000563854 OR52E1Q8NGJ3 308 aa17.19■□□□□ 0.34
NME3-205ENST00000563854 C9orf43Q8TAL5 461 aaPredicted RBP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms