RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 ARMC6Q6NXE6 501 aa16.34■□□□□ 0.21
HDGFL3-203ENST00000563404 RANBP10Q6VN20 620 aa16.34■□□□□ 0.21
HDGFL3-203ENST00000563404 GAS2L3Q86XJ1 694 aa16.34■□□□□ 0.21
HDGFL3-203ENST00000563404 CFAP206Q8IYR0 622 aa16.34■□□□□ 0.21
HDGFL3-203ENST00000563404 DSELQ8IZU8 1212 aa16.34■□□□□ 0.21
HDGFL3-203ENST00000563404 CARFQ8N187 725 aa16.34■□□□□ 0.21
HDGFL3-203ENST00000563404 ENDOVQ8N8Q3 282 aaKnown RBP16.34■□□□□ 0.21
HDGFL3-203ENST00000563404 OR13C4Q8NGS5 318 aa16.34■□□□□ 0.21
HDGFL3-203ENST00000563404 OR8K5Q8NH50 307 aa16.34■□□□□ 0.21
HDGFL3-203ENST00000563404 KRT35Q92764 455 aa16.34■□□□□ 0.21
HDGFL3-203ENST00000563404 LRFN5Q96NI6 719 aa16.34■□□□□ 0.21
HDGFL3-203ENST00000563404 HEMGNQ9BXL5 484 aa16.34■□□□□ 0.21
HDGFL3-203ENST00000563404 GBA3Q9H227 469 aa16.34■□□□□ 0.21
HDGFL3-203ENST00000563404 FAM96AQ9H5X1 160 aa16.34■□□□□ 0.21
HDGFL3-203ENST00000563404 ACSS2Q9NR19 701 aa16.34■□□□□ 0.21
HDGFL3-203ENST00000563404 SOHLH2Q9NX45 425 aa16.34■□□□□ 0.21
HDGFL3-203ENST00000563404 POMT2Q9UKY4 750 aa16.34■□□□□ 0.21
HDGFL3-203ENST00000563404 MAP4K5Q9Y4K4 846 aa16.34■□□□□ 0.21
HDGFL3-203ENST00000563404 SPTBP11277 2137 aa16.34■□□□□ 0.21
HDGFL3-203ENST00000563404 MEN1O00255 615 aa16.33■□□□□ 0.2
HDGFL3-203ENST00000563404 VPS4BO75351 444 aa16.33■□□□□ 0.2
HDGFL3-203ENST00000563404 CEACAM4O75871 244 aa16.33■□□□□ 0.2
HDGFL3-203ENST00000563404 ZRANB2O95218 330 aaKnown RBP eCLIP16.33■□□□□ 0.2
HDGFL3-203ENST00000563404 SLC35G4P0C7Q5 338 aa16.33■□□□□ 0.2
HDGFL3-203ENST00000563404 GEMP55040 296 aa16.33■□□□□ 0.2
HDGFL3-203ENST00000563404 ZNF658BQ4V348 819 aaPredicted RBP16.33■□□□□ 0.2
HDGFL3-203ENST00000563404 TMTC4Q5T4D3 741 aa16.33■□□□□ 0.2
HDGFL3-203ENST00000563404 FAM198BQ6UWH4 519 aa16.33■□□□□ 0.2
HDGFL3-203ENST00000563404 BBS12Q6ZW61 710 aa16.33■□□□□ 0.2
HDGFL3-203ENST00000563404 RCOR2Q8IZ40 523 aa16.33■□□□□ 0.2
HDGFL3-203ENST00000563404 GALNT11Q8NCW6 608 aa16.33■□□□□ 0.2
HDGFL3-203ENST00000563404 OR1L3Q8NH93 324 aa16.33■□□□□ 0.2
HDGFL3-203ENST00000563404 RBSNQ9H1K0 784 aa16.33■□□□□ 0.2
HDGFL3-203ENST00000563404 PCMTD2Q9NV79 361 aa16.33■□□□□ 0.2
HDGFL3-203ENST00000563404 VPS4AQ9UN37 437 aa16.33■□□□□ 0.2
HDGFL3-203ENST00000563404 SHANK1Q9Y566 2161 aa16.33■□□□□ 0.2
HDGFL3-203ENST00000563404 ICE1Q9Y2F5 2266 aa16.33■□□□□ 0.2
HDGFL3-203ENST00000563404 PRRC2CQ9Y520 2896 aaKnown RBP16.32■□□□□ 0.2
HDGFL3-203ENST00000563404 C2orf81A6NN90 581 aa16.32■□□□□ 0.2
HDGFL3-203ENST00000563404 BTN3A3O00478 584 aa16.32■□□□□ 0.2
HDGFL3-203ENST00000563404 CCL22O00626 93 aa16.32■□□□□ 0.2
HDGFL3-203ENST00000563404 RAB40ALP0C0E4 278 aa16.32■□□□□ 0.2
HDGFL3-203ENST00000563404 RNF224P0DH78 156 aa16.32■□□□□ 0.2
HDGFL3-203ENST00000563404 ST6GAL1P15907 406 aa16.32■□□□□ 0.2
HDGFL3-203ENST00000563404 CDH3P22223 829 aa16.32■□□□□ 0.2
HDGFL3-203ENST00000563404 PSMB4P28070 264 aa16.32■□□□□ 0.2
HDGFL3-203ENST00000563404 PRLHRP49683 370 aa16.32■□□□□ 0.2
HDGFL3-203ENST00000563404 ITGA1P56199 1179 aa16.32■□□□□ 0.2
HDGFL3-203ENST00000563404 GSDMDP57764 484 aa16.32■□□□□ 0.2
HDGFL3-203ENST00000563404 TMPRSS15P98073 1019 aa16.32■□□□□ 0.2
HDGFL3-203ENST00000563404 GSE1Q14687 1217 aa16.32■□□□□ 0.2
HDGFL3-203ENST00000563404 PRR30Q53SZ7 412 aaPredicted RBP16.32■□□□□ 0.2
HDGFL3-203ENST00000563404 DENND5AQ6IQ26 1287 aa16.32■□□□□ 0.2
HDGFL3-203ENST00000563404 CCDC50Q8IVM0 306 aa16.32■□□□□ 0.2
HDGFL3-203ENST00000563404 Q8NA96 180 aa16.32■□□□□ 0.2
HDGFL3-203ENST00000563404 CPT1BQ92523 772 aa16.32■□□□□ 0.2
HDGFL3-203ENST00000563404 LRRC4CQ9HCJ2 640 aa16.32■□□□□ 0.2
HDGFL3-203ENST00000563404 C1GALT1Q9NS00 363 aa16.32■□□□□ 0.2
HDGFL3-203ENST00000563404 TCFL5Q9UL49 500 aa16.32■□□□□ 0.2
HDGFL3-203ENST00000563404 SNX7Q9UNH6 387 aa16.32■□□□□ 0.2
HDGFL3-203ENST00000563404 COLEC10Q9Y6Z7 277 aa16.32■□□□□ 0.2
HDGFL3-203ENST00000563404 KLHL33A6NCF5 533 aa16.31■□□□□ 0.2
HDGFL3-203ENST00000563404 C5orf60A6NFR6 353 aa16.31■□□□□ 0.2
HDGFL3-203ENST00000563404 TMEM150CB9EJG8 249 aa16.31■□□□□ 0.2
HDGFL3-203ENST00000563404 H7C0C1 242 aa16.31■□□□□ 0.2
HDGFL3-203ENST00000563404 APOC4-APOC2K7ER74 178 aa16.31■□□□□ 0.2
HDGFL3-203ENST00000563404 BTN3A1O00481 513 aa16.31■□□□□ 0.2
HDGFL3-203ENST00000563404 SEMA7AO75326 666 aa16.31■□□□□ 0.2
HDGFL3-203ENST00000563404 ANXA9O76027 345 aa16.31■□□□□ 0.2
HDGFL3-203ENST00000563404 TMEM63AO94886 807 aa16.31■□□□□ 0.2
HDGFL3-203ENST00000563404 APOC2P02655 101 aa16.31■□□□□ 0.2
HDGFL3-203ENST00000563404 KLK3P07288 261 aaPredicted RBP16.31■□□□□ 0.2
HDGFL3-203ENST00000563404 TPM1P09493 284 aa16.31■□□□□ 0.2
HDGFL3-203ENST00000563404 NDUFS1P28331 727 aa16.31■□□□□ 0.2
HDGFL3-203ENST00000563404 PRDX3P30048 256 aaKnown RBP16.31■□□□□ 0.2
HDGFL3-203ENST00000563404 MAGEA1P43355 309 aa16.31■□□□□ 0.2
HDGFL3-203ENST00000563404 ATP5OP48047 213 aa16.31■□□□□ 0.2
HDGFL3-203ENST00000563404 CDKN1CP49918 316 aaPredicted RBP16.31■□□□□ 0.2
HDGFL3-203ENST00000563404 ZNF140P52738 457 aaPredicted RBP16.31■□□□□ 0.2
HDGFL3-203ENST00000563404 TBX2Q13207 712 aaPredicted RBP16.31■□□□□ 0.2
HDGFL3-203ENST00000563404 C4orf17Q53FE4 359 aa16.31■□□□□ 0.2
HDGFL3-203ENST00000563404 SARM1Q6SZW1 724 aa16.31■□□□□ 0.2
HDGFL3-203ENST00000563404 NXPE1Q8N323 547 aa16.31■□□□□ 0.2
HDGFL3-203ENST00000563404 ZBTB2Q8N680 514 aa16.31■□□□□ 0.2
HDGFL3-203ENST00000563404 EFCAB3Q8N7B9 438 aa16.31■□□□□ 0.2
HDGFL3-203ENST00000563404 RNF214Q8ND24 703 aa16.31■□□□□ 0.2
HDGFL3-203ENST00000563404 ACVR1CQ8NER5 493 aa16.31■□□□□ 0.2
HDGFL3-203ENST00000563404 FDCSPQ8NFU4 85 aa16.31■□□□□ 0.2
HDGFL3-203ENST00000563404 HM13Q8TCT9 377 aa16.31■□□□□ 0.2
HDGFL3-203ENST00000563404 LCN9Q8WX39 176 aa16.31■□□□□ 0.2
HDGFL3-203ENST00000563404 CLIP3Q96DZ5 547 aa16.31■□□□□ 0.2
HDGFL3-203ENST00000563404 CCM2Q9BSQ5 444 aa16.31■□□□□ 0.2
HDGFL3-203ENST00000563404 NUDT9Q9BW91 350 aa16.31■□□□□ 0.2
HDGFL3-203ENST00000563404 NLNQ9BYT8 704 aa16.31■□□□□ 0.2
HDGFL3-203ENST00000563404 KLHL25Q9H0H3 589 aa16.31■□□□□ 0.2
HDGFL3-203ENST00000563404 OR52A5Q9H2C5 316 aa16.31■□□□□ 0.2
HDGFL3-203ENST00000563404 LUZP4Q9P127 313 aa16.31■□□□□ 0.2
HDGFL3-203ENST00000563404 CRLS1Q9UJA2 301 aa16.31■□□□□ 0.2
HDGFL3-203ENST00000563404 SPTBN1Q01082 2364 aaKnown RBP16.31■□□□□ 0.2
HDGFL3-203ENST00000563404 CCDC66A2RUB6 948 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms