RNA–Protein interactions for RNA: ENST00000563218.5

SPG7-207, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 5

Gene SPG7, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-207ENST00000563218 GEMP55040 296 aa13.12□□□□□ -0.31
SPG7-207ENST00000563218 UBE2IP63279 158 aaKnown RBP13.12□□□□□ -0.31
SPG7-207ENST00000563218 SH3BP2P78314 561 aa13.12□□□□□ -0.31
SPG7-207ENST00000563218 ABHD18Q0P651 414 aa13.12□□□□□ -0.31
SPG7-207ENST00000563218 GPS2Q13227 327 aa13.12□□□□□ -0.31
SPG7-207ENST00000563218 GALNT3Q14435 633 aa13.12□□□□□ -0.31
SPG7-207ENST00000563218 UAP1Q16222 522 aaPredicted RBP13.12□□□□□ -0.31
SPG7-207ENST00000563218 QPCTQ16769 361 aa13.12□□□□□ -0.31
SPG7-207ENST00000563218 BBS9Q3SYG4 887 aa13.12□□□□□ -0.31
SPG7-207ENST00000563218 FNBP1LQ5T0N5 605 aa13.12□□□□□ -0.31
SPG7-207ENST00000563218 KDELC2Q7Z4H8 507 aa13.12□□□□□ -0.31
SPG7-207ENST00000563218 NLRP8Q86W28 1048 aa13.12□□□□□ -0.31
SPG7-207ENST00000563218 KIAA1143Q96AT1 154 aaPredicted RBP13.12□□□□□ -0.31
SPG7-207ENST00000563218 TTC25Q96NG3 672 aa13.12□□□□□ -0.31
SPG7-207ENST00000563218 SERPINB12Q96P63 405 aa13.12□□□□□ -0.31
SPG7-207ENST00000563218 CPNE7Q9UBL6 633 aa13.12□□□□□ -0.31
SPG7-207ENST00000563218 ANAPC2Q9UJX6 822 aa13.12□□□□□ -0.31
SPG7-207ENST00000563218 SLC30A1Q9Y6M5 507 aa13.12□□□□□ -0.31
SPG7-207ENST00000563218 FER1L5A0AVI2 2057 aa13.11□□□□□ -0.31
SPG7-207ENST00000563218 SPTAN1Q13813 2472 aaKnown RBP13.11□□□□□ -0.31
SPG7-207ENST00000563218 PRR19A6NJB7 356 aa13.11□□□□□ -0.31
SPG7-207ENST00000563218 E7ESA3 106 aa13.11□□□□□ -0.31
SPG7-207ENST00000563218 POLR1CO15160 346 aaPredicted RBP13.11□□□□□ -0.31
SPG7-207ENST00000563218 RIPK2O43353 540 aa13.11□□□□□ -0.31
SPG7-207ENST00000563218 GRID2O43424 1007 aa13.11□□□□□ -0.31
SPG7-207ENST00000563218 PIRTP0C851 137 aa13.11□□□□□ -0.31
SPG7-207ENST00000563218 MLNP12872 115 aa13.11□□□□□ -0.31
SPG7-207ENST00000563218 TCN2P20062 427 aa13.11□□□□□ -0.31
SPG7-207ENST00000563218 LEPRP48357 1165 aaKnown RBP13.11□□□□□ -0.31
SPG7-207ENST00000563218 SEPHS1P49903 392 aa13.11□□□□□ -0.31
SPG7-207ENST00000563218 FOXM1Q08050 763 aa13.11□□□□□ -0.31
SPG7-207ENST00000563218 LACTB2Q53H82 288 aaPredicted RBP13.11□□□□□ -0.31
SPG7-207ENST00000563218 HIST2H2BCQ6DN03 193 aa13.11□□□□□ -0.31
SPG7-207ENST00000563218 CRTC3Q6UUV7 619 aa13.11□□□□□ -0.31
SPG7-207ENST00000563218 LRIG3Q6UXM1 1119 aa13.11□□□□□ -0.31
SPG7-207ENST00000563218 LYSMD3Q7Z3D4 306 aa13.11□□□□□ -0.31
SPG7-207ENST00000563218 SLC9B2Q86UD5 537 aa13.11□□□□□ -0.31
SPG7-207ENST00000563218 ZBED8Q8IZ13 594 aa13.11□□□□□ -0.31
SPG7-207ENST00000563218 GALNT6Q8NCL4 622 aa13.11□□□□□ -0.31
SPG7-207ENST00000563218 PYROXD1Q8WU10 500 aa13.11□□□□□ -0.31
SPG7-207ENST00000563218 ELMO2Q96JJ3 720 aa13.11□□□□□ -0.31
SPG7-207ENST00000563218 C9orf72Q96LT7 481 aa13.11□□□□□ -0.31
SPG7-207ENST00000563218 ZIM3Q96PE6 472 aa13.11□□□□□ -0.31
SPG7-207ENST00000563218 PLEKHG4BQ96PX9 1271 aa13.11□□□□□ -0.31
SPG7-207ENST00000563218 LYSMD1Q96S90 227 aa13.11□□□□□ -0.31
SPG7-207ENST00000563218 GORASP1Q9BQQ3 440 aa13.11□□□□□ -0.31
SPG7-207ENST00000563218 SLC25A51Q9H1U9 297 aa13.11□□□□□ -0.31
SPG7-207ENST00000563218 OR2AG1Q9H205 316 aa13.11□□□□□ -0.31
SPG7-207ENST00000563218 OSGEPL1Q9H4B0 414 aa13.11□□□□□ -0.31
SPG7-207ENST00000563218 LRRC40Q9H9A6 602 aa13.11□□□□□ -0.31
SPG7-207ENST00000563218 NINJ2Q9NZG7 142 aa13.11□□□□□ -0.31
SPG7-207ENST00000563218 SLC23A2Q9UGH3 650 aa13.11□□□□□ -0.31
SPG7-207ENST00000563218 CROTQ9UKG9 612 aa13.11□□□□□ -0.31
SPG7-207ENST00000563218 MAN2B2Q9Y2E5 1009 aa13.11□□□□□ -0.31
SPG7-207ENST00000563218 RPS6KL1Q9Y6S9 549 aa13.11□□□□□ -0.31
SPG7-207ENST00000563218 TEX15Q9BXT5 2789 aa13.11□□□□□ -0.31
SPG7-207ENST00000563218 PCSK5Q92824 1860 aa13.1□□□□□ -0.31
SPG7-207ENST00000563218 AP3B1O00203 1094 aa13.1□□□□□ -0.31
SPG7-207ENST00000563218 NUAK1O60285 661 aa13.1□□□□□ -0.31
SPG7-207ENST00000563218 SUN1O94901 812 aa13.1□□□□□ -0.31
SPG7-207ENST00000563218 ACSL3O95573 720 aa13.1□□□□□ -0.31
SPG7-207ENST00000563218 TTC4O95801 387 aa13.1□□□□□ -0.31
SPG7-207ENST00000563218 SLC4A1P02730 911 aa13.1□□□□□ -0.31
SPG7-207ENST00000563218 C9P02748 559 aa13.1□□□□□ -0.31
SPG7-207ENST00000563218 PYGLP06737 847 aa13.1□□□□□ -0.31
SPG7-207ENST00000563218 DLSTP36957 453 aa13.1□□□□□ -0.31
SPG7-207ENST00000563218 CD86P42081 329 aa13.1□□□□□ -0.31
SPG7-207ENST00000563218 EPHA4P54764 986 aa13.1□□□□□ -0.31
SPG7-207ENST00000563218 MLLT10P55197 1068 aa13.1□□□□□ -0.31
SPG7-207ENST00000563218 IFFO1Q0D2I5 559 aa13.1□□□□□ -0.31
SPG7-207ENST00000563218 CBLBQ13191 982 aa13.1□□□□□ -0.31
SPG7-207ENST00000563218 SEPT7Q16181 437 aaKnown RBP13.1□□□□□ -0.31
SPG7-207ENST00000563218 KYNUQ16719 465 aa13.1□□□□□ -0.31
SPG7-207ENST00000563218 MSS51Q4VC12 460 aa13.1□□□□□ -0.31
SPG7-207ENST00000563218 KHDC1Q4VXA5 237 aaKnown RBP13.1□□□□□ -0.31
SPG7-207ENST00000563218 HP1BP3Q5SSJ5 553 aaPredicted RBP13.1□□□□□ -0.31
SPG7-207ENST00000563218 KCTD11Q693B1 232 aa13.1□□□□□ -0.31
SPG7-207ENST00000563218 LRRC8BQ6P9F7 803 aa13.1□□□□□ -0.31
SPG7-207ENST00000563218 LINC00523Q86TU6 105 aa13.1□□□□□ -0.31
SPG7-207ENST00000563218 CAND1Q86VP6 1230 aaKnown RBP13.1□□□□□ -0.31
SPG7-207ENST00000563218 ANKMY2Q8IV38 441 aa13.1□□□□□ -0.31
SPG7-207ENST00000563218 KLHDC8BQ8IXV7 354 aa13.1□□□□□ -0.31
SPG7-207ENST00000563218 IQCKQ8N0W5 287 aa13.1□□□□□ -0.31
SPG7-207ENST00000563218 NDUFAF2Q8N183 169 aa13.1□□□□□ -0.31
SPG7-207ENST00000563218 SPATA22Q8NHS9 363 aa13.1□□□□□ -0.31
SPG7-207ENST00000563218 APOBEC4Q8WW27 367 aaKnown RBP13.1□□□□□ -0.31
SPG7-207ENST00000563218 RSC1A1Q92681 617 aa13.1□□□□□ -0.31
SPG7-207ENST00000563218 MIB2Q96AX9 1013 aa13.1□□□□□ -0.31
SPG7-207ENST00000563218 LRRC39Q96DD0 335 aa13.1□□□□□ -0.31
SPG7-207ENST00000563218 OXNAD1Q96HP4 312 aaPredicted RBP13.1□□□□□ -0.31
SPG7-207ENST00000563218 TGM7Q96PF1 710 aa13.1□□□□□ -0.31
SPG7-207ENST00000563218 MLPHQ9BV36 600 aaPredicted RBP13.1□□□□□ -0.31
SPG7-207ENST00000563218 ULBP3Q9BZM4 244 aa13.1□□□□□ -0.31
SPG7-207ENST00000563218 FAM83DQ9H4H8 585 aa13.1□□□□□ -0.31
SPG7-207ENST00000563218 STN1Q9H668 368 aaKnown RBP13.1□□□□□ -0.31
SPG7-207ENST00000563218 KLC4Q9NSK0 619 aa13.1□□□□□ -0.31
SPG7-207ENST00000563218 UBP1Q9NZI7 540 aa13.1□□□□□ -0.31
SPG7-207ENST00000563218 ZNF624Q9P2J8 865 aaPredicted RBP13.1□□□□□ -0.31
SPG7-207ENST00000563218 KCNMB2Q9Y691 235 aa13.1□□□□□ -0.31
SPG7-207ENST00000563218 NOTCH2Q04721 2471 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms